Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:20:01 (29984): wrapper (7.7.26015): starting
00:20:01 (29984): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 00:20:01] Arguments: --nthreads 12
[2025-11-22 00:20:01] Threads: 12
[2025-11-22 00:20:01] Checking for CVMFS
[2025-11-22 00:20:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:20:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:20:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:20:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:20:01] 2.11.2.0 723 111440 90224 153161 3 80 10254221 20275200 1 130560 0 47807355 99.910 6159160 32913 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 00:20:01] CVMFS is ok
[2025-11-22 00:20:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 00:20:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 00:20:01] Further information can be found at the LHC@home message board.
[2025-11-22 00:20:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:20:01] Checking for apptainer binary...
[2025-11-22 00:20:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:20:01] Running /usr/bin/apptainer --version
[2025-11-22 00:20:01] apptainer version 1.3.2-1.el7
[2025-11-22 00:20:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:20:03] c-205-1.aglt2.org
[2025-11-22 00:20:03] apptainer works
[2025-11-22 00:20:03] Set ATHENA_PROC_NUMBER=12
[2025-11-22 00:20:03] Set ATHENA_CORE_NUMBER=12
[2025-11-22 00:20:03] Starting ATLAS job with PandaID=6894281070
[2025-11-22 00:20:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 07:40:11]  *** The last 200 lines of the pilot log: ***
[2025-11-22 07:40:11] 2025-11-22 12:39:39,188 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 07:40:11] 2025-11-22 12:39:39,188 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 07:40:11] 2025-11-22 12:39:39,195 | INFO     | fitting pss+swap vs Time
[2025-11-22 07:40:11] 2025-11-22 12:39:39,195 | INFO     | sum of square deviations: 24999176060.442097
[2025-11-22 07:40:11] 2025-11-22 12:39:39,199 | INFO     | sum of deviations: 248976489303.91672
[2025-11-22 07:40:11] 2025-11-22 12:39:39,199 | INFO     | mean x: 1763801993.761574
[2025-11-22 07:40:11] 2025-11-22 12:39:39,200 | INFO     | mean y: 3424502.4166666665
[2025-11-22 07:40:11] 2025-11-22 12:39:39,200 | INFO     | intersect: -17562963572.624535
[2025-11-22 07:40:11] 2025-11-22 12:39:39,200 | INFO     | chi2: 7.058916590040613
[2025-11-22 07:40:11] 2025-11-22 12:39:39,201 | INFO     | sum of square deviations: 24141185135.095913
[2025-11-22 07:40:11] 2025-11-22 12:39:39,205 | INFO     | sum of deviations: 421213113818.194
[2025-11-22 07:40:11] 2025-11-22 12:39:39,205 | INFO     | mean x: 1763801841.264637
[2025-11-22 07:40:11] 2025-11-22 12:39:39,205 | INFO     | mean y: 3455103.608899297
[2025-11-22 07:40:11] 2025-11-22 12:39:39,205 | INFO     | intersect: -30771192518.693504
[2025-11-22 07:40:11] 2025-11-22 12:39:39,205 | INFO     | chi2: 3.8061366735205264
[2025-11-22 07:40:11] 2025-11-22 12:39:39,205 | INFO     | current chi2=3.8061366735205264 (change=46.080441311764694 %)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,206 | INFO     | sum of square deviations: 23303055047.241673
[2025-11-22 07:40:11] 2025-11-22 12:39:39,210 | INFO     | sum of deviations: 518774223906.46436
[2025-11-22 07:40:11] 2025-11-22 12:39:39,210 | INFO     | mean x: 1763801688.7677724
[2025-11-22 07:40:11] 2025-11-22 12:39:39,210 | INFO     | mean y: 3472836.0047393367
[2025-11-22 07:40:11] 2025-11-22 12:39:39,211 | INFO     | intersect: -39262402404.83501
[2025-11-22 07:40:11] 2025-11-22 12:39:39,211 | INFO     | chi2: 2.668704810252257
[2025-11-22 07:40:11] 2025-11-22 12:39:39,211 | INFO     | current chi2=2.668704810252257 (change=29.88415710821519 %)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,212 | INFO     | sum of square deviations: 22484553234.378746
[2025-11-22 07:40:11] 2025-11-22 12:39:39,215 | INFO     | sum of deviations: 524085683629.91644
[2025-11-22 07:40:11] 2025-11-22 12:39:39,216 | INFO     | mean x: 1763801536.2709832
[2025-11-22 07:40:11] 2025-11-22 12:39:39,216 | INFO     | mean y: 3473800.0095923264
[2025-11-22 07:40:11] 2025-11-22 12:39:39,216 | INFO     | intersect: -41108445315.67464
[2025-11-22 07:40:11] 2025-11-22 12:39:39,216 | INFO     | chi2: 2.5832874408000523
[2025-11-22 07:40:11] 2025-11-22 12:39:39,216 | INFO     | current chi2=2.5832874408000523 (change=3.200705043287664 %)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,217 | INFO     | right removable region: 416
[2025-11-22 07:40:11] 2025-11-22 12:39:39,217 | INFO     | sum of square deviations: 24141116205.095913
[2025-11-22 07:40:11] 2025-11-22 12:39:39,221 | INFO     | sum of deviations: 102451631466.95815
[2025-11-22 07:40:11] 2025-11-22 12:39:39,221 | INFO     | mean x: 1763802146.264637
[2025-11-22 07:40:11] 2025-11-22 12:39:39,221 | INFO     | mean y: 3450471.566744731
[2025-11-22 07:40:11] 2025-11-22 12:39:39,222 | INFO     | intersect: -7481887237.531799
[2025-11-22 07:40:11] 2025-11-22 12:39:39,222 | INFO     | chi2: 4.639592305969918
[2025-11-22 07:40:11] 2025-11-22 12:39:39,222 | INFO     | current chi2=4.639592305969918 (change=34.27330884578104 %)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,223 | INFO     | sum of square deviations: 23302917187.24167
[2025-11-22 07:40:11] 2025-11-22 12:39:39,226 | INFO     | sum of deviations: 69852011239.33148
[2025-11-22 07:40:11] 2025-11-22 12:39:39,227 | INFO     | mean x: 1763802298.7677724
[2025-11-22 07:40:11] 2025-11-22 12:39:39,227 | INFO     | mean y: 3456396.789099526
[2025-11-22 07:40:11] 2025-11-22 12:39:39,227 | INFO     | intersect: -5283655813.562824
[2025-11-22 07:40:11] 2025-11-22 12:39:39,227 | INFO     | chi2: 4.57217388239221
[2025-11-22 07:40:11] 2025-11-22 12:39:39,227 | INFO     | current chi2=4.57217388239221 (change=1.4531109444887746 %)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,228 | INFO     | left removable region: 20
[2025-11-22 07:40:11] 2025-11-22 12:39:39,228 | INFO     | sum of square deviations: 19255712454.997543
[2025-11-22 07:40:11] 2025-11-22 12:39:39,231 | INFO     | sum of deviations: 303928984371.576
[2025-11-22 07:40:11] 2025-11-22 12:39:39,232 | INFO     | mean x: 1763802115.7752526
[2025-11-22 07:40:11] 2025-11-22 12:39:39,232 | INFO     | mean y: 3515611.242424242
[2025-11-22 07:40:11] 2025-11-22 12:39:39,232 | INFO     | intersect: -27836045606.388866
[2025-11-22 07:40:11] 2025-11-22 12:39:39,232 | INFO     | chi2: 0.025559076038788476
[2025-11-22 07:40:11] 2025-11-22 12:39:39,232 | INFO     | current memory leak: 15.78 B/s (using 396 data points, chi2=0.03)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,233 | INFO     | could have reported an average CPU frequency of 2393 MHz (18 samples)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,233 | INFO     | ..............................
[2025-11-22 07:40:11] 2025-11-22 12:39:39,233 | INFO     | . Timing measurements:
[2025-11-22 07:40:11] 2025-11-22 12:39:39,233 | INFO     | . get job = 0 s
[2025-11-22 07:40:11] 2025-11-22 12:39:39,233 | INFO     | . initial setup = 2 s
[2025-11-22 07:40:11] 2025-11-22 12:39:39,233 | INFO     | . payload setup = 8 s
[2025-11-22 07:40:11] 2025-11-22 12:39:39,234 | INFO     | . stage-in = 0 s
[2025-11-22 07:40:11] 2025-11-22 12:39:39,234 | INFO     | . payload execution = 26325 s
[2025-11-22 07:40:11] 2025-11-22 12:39:39,234 | INFO     | . stage-out = 3 s
[2025-11-22 07:40:11] 2025-11-22 12:39:39,234 | INFO     | . log creation = 0 s
[2025-11-22 07:40:11] 2025-11-22 12:39:39,234 | INFO     | ..............................
[2025-11-22 07:40:11] 2025-11-22 12:39:39,315 | INFO     | 
[2025-11-22 07:40:11] 2025-11-22 12:39:39,315 | INFO     | job summary report
[2025-11-22 07:40:11] 2025-11-22 12:39:39,315 | INFO     | --------------------------------------------------
[2025-11-22 07:40:11] 2025-11-22 12:39:39,316 | INFO     | PanDA job id: 6894281070
[2025-11-22 07:40:11] 2025-11-22 12:39:39,316 | INFO     | task id: 47533967
[2025-11-22 07:40:11] 2025-11-22 12:39:39,316 | INFO     | errors: (none)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 07:40:11] 2025-11-22 12:39:39,316 | INFO     | pilot state: finished 
[2025-11-22 07:40:11] 2025-11-22 12:39:39,316 | INFO     | transexitcode: 0
[2025-11-22 07:40:11] 2025-11-22 12:39:39,317 | INFO     | exeerrorcode: 0
[2025-11-22 07:40:11] 2025-11-22 12:39:39,317 | INFO     | exeerrordiag: 
[2025-11-22 07:40:11] 2025-11-22 12:39:39,317 | INFO     | exitcode: 0
[2025-11-22 07:40:11] 2025-11-22 12:39:39,317 | INFO     | exitmsg: OK
[2025-11-22 07:40:11] 2025-11-22 12:39:39,317 | INFO     | cpuconsumptiontime: 299930 s
[2025-11-22 07:40:11] 2025-11-22 12:39:39,317 | INFO     | nevents: 1000
[2025-11-22 07:40:11] 2025-11-22 12:39:39,317 | INFO     | neventsw: 0
[2025-11-22 07:40:11] 2025-11-22 12:39:39,318 | INFO     | pid: 8936
[2025-11-22 07:40:11] 2025-11-22 12:39:39,318 | INFO     | pgrp: 8936
[2025-11-22 07:40:11] 2025-11-22 12:39:39,318 | INFO     | corecount: 12
[2025-11-22 07:40:11] 2025-11-22 12:39:39,318 | INFO     | event service: False
[2025-11-22 07:40:11] 2025-11-22 12:39:39,318 | INFO     | sizes: {0: 2298806, 1: 2298806, 5: 2299096, 11: 2299152, 26334: 2336583, 26338: 2345577, 26339: 2345761, 26344: 2346007}
[2025-11-22 07:40:11] 2025-11-22 12:39:39,318 | INFO     | --------------------------------------------------
[2025-11-22 07:40:11] 2025-11-22 12:39:39,319 | INFO     | 
[2025-11-22 07:40:11] 2025-11-22 12:39:39,319 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 07:40:11] 2025-11-22 12:39:39,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,342 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,345 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 07:40:11] 2025-11-22 12:39:39,345 | INFO     | job 6894281070 has completed (purged errors)
[2025-11-22 07:40:11] 2025-11-22 12:39:39,345 | INFO     | overall cleanup function is called
[2025-11-22 07:40:11] 2025-11-22 12:39:40,362 | INFO     | --- collectZombieJob: --- 10, [8936]
[2025-11-22 07:40:11] 2025-11-22 12:39:40,362 | INFO     | zombie collector waiting for pid 8936
[2025-11-22 07:40:11] 2025-11-22 12:39:40,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 07:40:11] 2025-11-22 12:39:40,362 | INFO     | collected zombie processes
[2025-11-22 07:40:11] 2025-11-22 12:39:40,363 | INFO     | will attempt to kill all subprocesses of pid=8936
[2025-11-22 07:40:11] 2025-11-22 12:39:40,452 | INFO     | process IDs to be killed: [8936] (in reverse order)
[2025-11-22 07:40:11] 2025-11-22 12:39:40,505 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 07:40:11] 2025-11-22 12:39:40,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 07:40:11] 2025-11-22 12:39:40,509 | INFO     | did not find any defunct processes belonging to 8936
[2025-11-22 07:40:11] 2025-11-22 12:39:40,512 | INFO     | did not find any defunct processes belonging to 8936
[2025-11-22 07:40:11] 2025-11-22 12:39:40,514 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 07:40:11] 2025-11-22 12:39:40,514 | INFO     | ready for new job
[2025-11-22 07:40:11] 2025-11-22 12:39:40,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 07:40:11] 2025-11-22 12:39:40,517 | INFO     | ***************************************
[2025-11-22 07:40:11] 2025-11-22 12:39:40,517 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 07:40:11] 2025-11-22 12:39:40,517 | INFO     | ***************************************
[2025-11-22 07:40:11] 2025-11-22 12:39:40,517 | INFO     | 
[2025-11-22 07:40:11] 2025-11-22 12:39:40,518 | INFO     | architecture information:
[2025-11-22 07:40:11] 2025-11-22 12:39:40,518 | INFO     | executing command: cat /etc/os-release
[2025-11-22 07:40:11] 2025-11-22 12:39:40,535 | INFO     | cat /etc/os-release:
[2025-11-22 07:40:11] NAME="CentOS Linux"
[2025-11-22 07:40:11] VERSION="7 (Core)"
[2025-11-22 07:40:11] ID="centos"
[2025-11-22 07:40:11] ID_LIKE="rhel fedora"
[2025-11-22 07:40:11] VERSION_ID="7"
[2025-11-22 07:40:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 07:40:11] ANSI_COLOR="0;31"
[2025-11-22 07:40:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 07:40:11] HOME_URL="https://www.centos.org/"
[2025-11-22 07:40:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 07:40:11] 
[2025-11-22 07:40:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 07:40:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 07:40:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 07:40:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 07:40:11] 
[2025-11-22 07:40:11] 2025-11-22 12:39:40,535 | INFO     | ***************************************
[2025-11-22 07:40:11] 2025-11-22 12:39:41,038 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 07:40:11] 2025-11-22 12:39:41,056 | INFO     | sufficient remaining disk space (28374466560 B)
[2025-11-22 07:40:11] 2025-11-22 12:39:41,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 07:40:11] 2025-11-22 12:39:41,056 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 07:40:11] 2025-11-22 12:39:41,056 | INFO     | update_server=False
[2025-11-22 07:40:11] 2025-11-22 12:39:41,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 07:40:11] 2025-11-22 12:39:41,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 07:40:11] 2025-11-22 12:39:41,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:40:11] 2025-11-22 12:39:41,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 07:40:11] 2025-11-22 12:39:41,258 | INFO     | all data control threads have been joined
[2025-11-22 07:40:11] 2025-11-22 12:39:41,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:40:11] 2025-11-22 12:39:41,471 | INFO     | aborting loop
[2025-11-22 07:40:11] 2025-11-22 12:39:42,062 | INFO     | [job] retrieve thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:42,063 | INFO     | [job] queue monitor thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:42,146 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:42,229 | INFO     | all job control threads have been joined
[2025-11-22 07:40:11] 2025-11-22 12:39:42,264 | INFO     | [data] control thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:42,301 | INFO     | all payload control threads have been joined
[2025-11-22 07:40:11] 2025-11-22 12:39:42,454 | INFO     | [payload] validate_post thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:42,476 | INFO     | [job] job monitor thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:42,629 | INFO     | [data] copytool_in thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:43,056 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:43,063 | INFO     | [data] copytool_out thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:43,147 | INFO     | [job] validate thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:43,190 | INFO     | [payload] failed_post thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:43,231 | INFO     | [job] control thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:43,307 | INFO     | [payload] control thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:43,460 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:45,064 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:39:51,882 | INFO     | job.realtimelogging is not enabled
[2025-11-22 07:40:11] 2025-11-22 12:39:52,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 07:40:11] 2025-11-22 12:40:01,143 | INFO     | [monitor] cgroup control has ended
[2025-11-22 07:40:11] 2025-11-22 12:40:02,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169021818688)>', '<ExcThread(monitor, started 140168572942080)>']
[2025-11-22 07:40:11] 2025-11-22 12:40:07,367 | INFO     | all workflow threads have been joined
[2025-11-22 07:40:11] 2025-11-22 12:40:07,368 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 07:40:11] 2025-11-22 12:40:07,368 | INFO     | traces error code: 0
[2025-11-22 07:40:11] 2025-11-22 12:40:07,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 07:40:11] 2025-11-22 12:40:11,660 | INFO     | PID=2430 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 07:40:11] 2025-11-22 12:40:11,660 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 07:40:11] 2025-11-22 12:40:11,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 07:40:11] 2025-11-22 12:40:11,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 07:40:11] 2025-11-22 12:40:11,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 07:40:11] 2025-11-22 12:40:11,660 | INFO     | [monitor] control thread has ended
[2025-11-22 07:40:11] 2025-11-22 12:40:11,741 [wrapper] ==== pilot stdout END ====
[2025-11-22 07:40:11] 2025-11-22 12:40:11,745 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 07:40:11] 2025-11-22 12:40:11,749 [wrapper] pilotpid: 2430
[2025-11-22 07:40:11] 2025-11-22 12:40:11,753 [wrapper] Pilot exit status: 0
[2025-11-22 07:40:11] 2025-11-22 12:40:11,768 [wrapper] pandaids: 6894281070
[2025-11-22 07:40:11] 2025-11-22 12:40:11,810 [wrapper] cleanup supervisor_pilot 10343 2431
[2025-11-22 07:40:11] 2025-11-22 12:40:11,814 [wrapper] Test setup, not cleaning
[2025-11-22 07:40:11] 2025-11-22 12:40:11,818 [wrapper] apfmon messages muted
[2025-11-22 07:40:11] 2025-11-22 12:40:11,822 [wrapper] ==== wrapper stdout END ====
[2025-11-22 07:40:11] 2025-11-22 12:40:11,826 [wrapper] ==== wrapper stderr END ====
[2025-11-22 07:40:11]  *** Error codes and diagnostics ***
[2025-11-22 07:40:11]     "exeErrorCode": 0,
[2025-11-22 07:40:11]     "exeErrorDiag": "",
[2025-11-22 07:40:11]     "pilotErrorCode": 0,
[2025-11-22 07:40:11]     "pilotErrorDiag": "",
[2025-11-22 07:40:11]  *** Listing of results directory ***
[2025-11-22 07:40:11] total 1314552
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 04:05 pilot3.tar.gz
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 04:06 queuedata.json
[2025-11-22 07:40:11] -rwx------ 1 boincer umatlas     36292 Nov 21 04:07 runpilot2-wrapper.sh
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas       100 Nov 22 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 07:40:11] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 00:19 run_atlas
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas       105 Nov 22 00:19 job.xml
[2025-11-22 07:40:11] -rw-r--r-- 2 boincer umatlas 407148597 Nov 22 00:20 EVNT.47493127._002340.pool.root.1
[2025-11-22 07:40:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 00:20 start_atlas.sh
[2025-11-22 07:40:11] drwxrwx--x 2 boincer umatlas      4096 Nov 22 00:20 shared
[2025-11-22 07:40:11] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 00:20 input.tar.gz
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas         0 Nov 22 00:20 boinc_lockfile
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 00:20 pandaJob.out
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas        57 Nov 22 00:20 setup.sh.local
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas    989752 Nov 22 00:20 agis_schedconf.cvmfs.json
[2025-11-22 07:40:11] drwx------ 5 boincer umatlas      4096 Nov 22 00:20 pilot3
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas       532 Nov 22 07:27 boinc_task_state.xml
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 07:37 init_data.xml
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas 923291697 Nov 22 07:38 HITS.47533967._003113.pool.root.1
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas      1064 Nov 22 07:39 memory_monitor_summary.json
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas        95 Nov 22 07:39 pilot_heartbeat.json
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas   1526164 Nov 22 07:39 agis_ddmendpoints.agis.ALL.json
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas   2180705 Nov 22 07:39 log.47533967._003113.job.log.tgz.1
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas      8664 Nov 22 07:39 heartbeat.json
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 07:40 boinc_mmap_file
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas        29 Nov 22 07:40 wrapper_checkpoint.txt
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas       744 Nov 22 07:40 pilotlog.txt
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas   3687951 Nov 22 07:40 log.47533967._003113.job.log.1
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas       353 Nov 22 07:40 output.list
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas       620 Nov 22 07:40 runtime_log
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas   5888000 Nov 22 07:40 result.tar.gz
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas      9340 Nov 22 07:40 runtime_log.err
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas       669 Nov 22 07:40 AfnNDm0Hcg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwEJKDmHdZZAo.diag
[2025-11-22 07:40:11] -rw-r--r-- 1 boincer umatlas     21086 Nov 22 07:40 stderr.txt
[2025-11-22 07:40:11] HITS file was successfully produced:
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas 923291697 Nov 22 07:38 shared/HITS.pool.root.1
[2025-11-22 07:40:11]  *** Contents of shared directory: ***
[2025-11-22 07:40:11] total 1305616
[2025-11-22 07:40:11] -rw-r--r-- 2 boincer umatlas 407148597 Nov 22 00:20 ATLAS.root_0
[2025-11-22 07:40:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 00:20 start_atlas.sh
[2025-11-22 07:40:11] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 00:20 input.tar.gz
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas 923291697 Nov 22 07:38 HITS.pool.root.1
[2025-11-22 07:40:11] -rw------- 1 boincer umatlas   5888000 Nov 22 07:40 result.tar.gz
07:40:13 (29984): run_atlas exited; CPU time 292960.430409
07:40:13 (29984): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN