Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:59:31 (932779): wrapper (7.7.26015): starting
23:59:31 (932779): wrapper: running run_atlas (--nthreads 2)
[2025-11-24 23:59:31] Arguments: --nthreads 2
[2025-11-24 23:59:31] Threads: 2
[2025-11-24 23:59:31] Checking for CVMFS
[2025-11-24 23:59:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:59:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:59:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:59:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:59:31] 2.9.2.0 2892 7474 57160 153261 1 81 32432943 36864001 651 130560 0 2762747 99.975 362329 7739 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 23:59:31] CVMFS is ok
[2025-11-24 23:59:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:59:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:59:31] Further information can be found at the LHC@home message board.
[2025-11-24 23:59:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:59:31] Checking for apptainer binary...
[2025-11-24 23:59:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:59:31] Running /usr/bin/apptainer --version
[2025-11-24 23:59:31] apptainer version 1.4.1-1.1
[2025-11-24 23:59:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:59:31] belleA267a
[2025-11-24 23:59:31] apptainer works
[2025-11-24 23:59:31] Set ATHENA_PROC_NUMBER=2
[2025-11-24 23:59:31] Set ATHENA_CORE_NUMBER=2
[2025-11-24 23:59:31] Starting ATLAS job with PandaID=6894281052
[2025-11-24 23:59:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:25:46]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:25:46] 2025-11-25 11:25:12,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:25:46] 2025-11-25 11:25:13,638 | INFO     | time since job start (44737s) is within the limit (172800.0s)
[2025-11-25 12:25:46] 2025-11-25 11:25:14,607 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 12:25:46] 2025-11-25 11:25:14,608 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4551.0045
[2025-11-25 12:25:46] 2025-11-25 11:25:14,608 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894281052/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 12:25:46] 2025-11-25 11:25:14,609 | INFO     | extracted standard info from prmon json
[2025-11-25 12:25:46] 2025-11-25 11:25:14,609 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 12:25:46] 2025-11-25 11:25:14,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 12:25:46] 2025-11-25 11:25:14,613 | INFO     | fitting pss+swap vs Time
[2025-11-25 12:25:46] 2025-11-25 11:25:14,613 | INFO     | sum of square deviations: 122120771582.0
[2025-11-25 12:25:46] 2025-11-25 11:25:14,618 | INFO     | sum of deviations: 318127853676.00006
[2025-11-25 12:25:46] 2025-11-25 11:25:14,618 | INFO     | mean x: 1764047522.0
[2025-11-25 12:25:46] 2025-11-25 11:25:14,618 | INFO     | mean y: 2011852.545702592
[2025-11-25 12:25:46] 2025-11-25 11:25:14,618 | INFO     | intersect: -4593378797.926108
[2025-11-25 12:25:46] 2025-11-25 11:25:14,618 | INFO     | chi2: 4.64033312441637
[2025-11-25 12:25:46] 2025-11-25 11:25:14,618 | INFO     | sum of square deviations: 119638715742.0
[2025-11-25 12:25:46] 2025-11-25 11:25:14,623 | INFO     | sum of deviations: 441302200574.5
[2025-11-25 12:25:46] 2025-11-25 11:25:14,623 | INFO     | mean x: 1764047369.5
[2025-11-25 12:25:46] 2025-11-25 11:25:14,623 | INFO     | mean y: 2019414.232142857
[2025-11-25 12:25:46] 2025-11-25 11:25:14,623 | INFO     | intersect: -6504887495.039519
[2025-11-25 12:25:46] 2025-11-25 11:25:14,623 | INFO     | chi2: 2.610098513211514
[2025-11-25 12:25:46] 2025-11-25 11:25:14,623 | INFO     | current chi2=2.610098513211514 (change=43.75191514855315 %)
[2025-11-25 12:25:46] 2025-11-25 11:25:14,624 | INFO     | sum of square deviations: 117190521002.0
[2025-11-25 12:25:46] 2025-11-25 11:25:14,628 | INFO     | sum of deviations: 438613563812.0
[2025-11-25 12:25:46] 2025-11-25 11:25:14,628 | INFO     | mean x: 1764047217.0
[2025-11-25 12:25:46] 2025-11-25 11:25:14,628 | INFO     | mean y: 2019246.9557399724
[2025-11-25 12:25:46] 2025-11-25 11:25:14,628 | INFO     | intersect: -6600349527.97108
[2025-11-25 12:25:46] 2025-11-25 11:25:14,628 | INFO     | chi2: 2.607791647502905
[2025-11-25 12:25:46] 2025-11-25 11:25:14,628 | INFO     | current chi2=2.607791647502905 (change=0.08838232338482703 %)
[2025-11-25 12:25:46] 2025-11-25 11:25:14,628 | INFO     | right removable region: 722
[2025-11-25 12:25:46] 2025-11-25 11:25:14,629 | INFO     | sum of square deviations: 119638715742.0
[2025-11-25 12:25:46] 2025-11-25 11:25:14,633 | INFO     | sum of deviations: 174088620105.00006
[2025-11-25 12:25:46] 2025-11-25 11:25:14,633 | INFO     | mean x: 1764047674.5
[2025-11-25 12:25:46] 2025-11-25 11:25:14,633 | INFO     | mean y: 2020692.5824175824
[2025-11-25 12:25:46] 2025-11-25 11:25:14,633 | INFO     | intersect: -2564879357.6939454
[2025-11-25 12:25:46] 2025-11-25 11:25:14,633 | INFO     | chi2: 2.414359824800842
[2025-11-25 12:25:46] 2025-11-25 11:25:14,633 | INFO     | current chi2=2.414359824800842 (change=47.970118522374314 %)
[2025-11-25 12:25:46] 2025-11-25 11:25:14,634 | INFO     | sum of square deviations: 117190521002.0
[2025-11-25 12:25:46] 2025-11-25 11:25:14,638 | INFO     | sum of deviations: 131921136135.99994
[2025-11-25 12:25:46] 2025-11-25 11:25:14,638 | INFO     | mean x: 1764047827.0
[2025-11-25 12:25:46] 2025-11-25 11:25:14,638 | INFO     | mean y: 2023311.3181189487
[2025-11-25 12:25:46] 2025-11-25 11:25:14,638 | INFO     | intersect: -1983761814.8706303
[2025-11-25 12:25:46] 2025-11-25 11:25:14,638 | INFO     | chi2: 2.1341878681335573
[2025-11-25 12:25:46] 2025-11-25 11:25:14,638 | INFO     | current chi2=2.1341878681335573 (change=11.60439938526544 %)
[2025-11-25 12:25:46] 2025-11-25 11:25:14,638 | INFO     | left removable region: 20
[2025-11-25 12:25:46] 2025-11-25 11:25:14,639 | INFO     | sum of square deviations: 107272617835.5
[2025-11-25 12:25:46] 2025-11-25 11:25:14,643 | INFO     | sum of deviations: 221192759257.49997
[2025-11-25 12:25:46] 2025-11-25 11:25:14,643 | INFO     | mean x: 1764047796.5
[2025-11-25 12:25:46] 2025-11-25 11:25:14,643 | INFO     | mean y: 2033026.3974358975
[2025-11-25 12:25:46] 2025-11-25 11:25:14,643 | INFO     | intersect: -3635377968.534206
[2025-11-25 12:25:46] 2025-11-25 11:25:14,643 | INFO     | chi2: 0.0591545429072071
[2025-11-25 12:25:46] 2025-11-25 11:25:14,643 | INFO     | current memory leak: 2.06 B/s (using 702 data points, chi2=0.06)
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | could have reported an average CPU frequency of 4520 MHz (28 samples)
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | ..............................
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | . Timing measurements:
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | . get job = 0 s
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | . initial setup = 1 s
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | . payload setup = 2 s
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | . stage-in = 0 s
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | . payload execution = 44712 s
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | . stage-out = 0 s
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | . log creation = 0 s
[2025-11-25 12:25:46] 2025-11-25 11:25:14,644 | INFO     | ..............................
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | 
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | job summary report
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | --------------------------------------------------
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | PanDA job id: 6894281052
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | task id: 47533967
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | errors: (none)
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | pilot state: finished 
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | transexitcode: 0
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | exeerrorcode: 0
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | exeerrordiag: 
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | exitcode: 0
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | exitmsg: OK
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | cpuconsumptiontime: 88369 s
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | nevents: 1000
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | neventsw: 0
[2025-11-25 12:25:46] 2025-11-25 11:25:15,090 | INFO     | pid: 942905
[2025-11-25 12:25:46] 2025-11-25 11:25:15,091 | INFO     | pgrp: 942905
[2025-11-25 12:25:46] 2025-11-25 11:25:15,091 | INFO     | corecount: 2
[2025-11-25 12:25:46] 2025-11-25 11:25:15,091 | INFO     | event service: False
[2025-11-25 12:25:46] 2025-11-25 11:25:15,091 | INFO     | sizes: {0: 2284262, 3: 2284524, 11: 2284552, 44719: 2330884, 44720: 2339945, 44725: 2340135}
[2025-11-25 12:25:46] 2025-11-25 11:25:15,091 | INFO     | --------------------------------------------------
[2025-11-25 12:25:46] 2025-11-25 11:25:15,091 | INFO     | 
[2025-11-25 12:25:46] 2025-11-25 11:25:15,091 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-25 12:25:46] 2025-11-25 11:25:15,102 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | job 6894281052 has completed (purged errors)
[2025-11-25 12:25:46] 2025-11-25 11:25:15,103 | INFO     | overall cleanup function is called
[2025-11-25 12:25:46] 2025-11-25 11:25:16,110 | INFO     | --- collectZombieJob: --- 10, [942905]
[2025-11-25 12:25:46] 2025-11-25 11:25:16,110 | INFO     | zombie collector waiting for pid 942905
[2025-11-25 12:25:46] 2025-11-25 11:25:16,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 12:25:46] 2025-11-25 11:25:16,110 | INFO     | collected zombie processes
[2025-11-25 12:25:46] 2025-11-25 11:25:16,110 | INFO     | will attempt to kill all subprocesses of pid=942905
[2025-11-25 12:25:46] 2025-11-25 11:25:16,140 | INFO     | process IDs to be killed: [942905] (in reverse order)
[2025-11-25 12:25:46] 2025-11-25 11:25:16,161 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 12:25:46] 2025-11-25 11:25:16,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 12:25:46] 2025-11-25 11:25:16,162 | INFO     | did not find any defunct processes belonging to 942905
[2025-11-25 12:25:46] 2025-11-25 11:25:16,162 | INFO     | did not find any defunct processes belonging to 942905
[2025-11-25 12:25:46] 2025-11-25 11:25:16,163 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 12:25:46] 2025-11-25 11:25:16,163 | INFO     | ready for new job
[2025-11-25 12:25:46] 2025-11-25 11:25:16,163 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 12:25:46] 2025-11-25 11:25:16,164 | INFO     | ***************************************
[2025-11-25 12:25:46] 2025-11-25 11:25:16,164 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 12:25:46] 2025-11-25 11:25:16,164 | INFO     | ***************************************
[2025-11-25 12:25:46] 2025-11-25 11:25:16,164 | INFO     | 
[2025-11-25 12:25:46] 2025-11-25 11:25:16,164 | INFO     | architecture information:
[2025-11-25 12:25:46] 2025-11-25 11:25:16,164 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:25:46] 2025-11-25 11:25:16,174 | INFO     | cat /etc/os-release:
[2025-11-25 12:25:46] NAME="CentOS Linux"
[2025-11-25 12:25:46] VERSION="7 (Core)"
[2025-11-25 12:25:46] ID="centos"
[2025-11-25 12:25:46] ID_LIKE="rhel fedora"
[2025-11-25 12:25:46] VERSION_ID="7"
[2025-11-25 12:25:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:25:46] ANSI_COLOR="0;31"
[2025-11-25 12:25:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:25:46] HOME_URL="https://www.centos.org/"
[2025-11-25 12:25:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:25:46] 
[2025-11-25 12:25:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:25:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:25:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:25:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:25:46] 
[2025-11-25 12:25:46] 2025-11-25 11:25:16,174 | INFO     | ***************************************
[2025-11-25 12:25:46] 2025-11-25 11:25:16,676 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 12:25:46] 2025-11-25 11:25:16,686 | INFO     | sufficient remaining disk space (89319800832 B)
[2025-11-25 12:25:46] 2025-11-25 11:25:16,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:25:46] 2025-11-25 11:25:16,686 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:25:46] 2025-11-25 11:25:16,686 | INFO     | update_server=False
[2025-11-25 12:25:46] 2025-11-25 11:25:16,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:25:46] 2025-11-25 11:25:16,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:25:46] 2025-11-25 11:25:16,686 | INFO     | aborting loop
[2025-11-25 12:25:46] 2025-11-25 11:25:16,991 | INFO     | all data control threads have been joined
[2025-11-25 12:25:46] 2025-11-25 11:25:17,433 | INFO     | all payload control threads have been joined
[2025-11-25 12:25:46] 2025-11-25 11:25:17,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:25:46] 2025-11-25 11:25:17,691 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:17,692 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:17,700 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:17,722 | INFO     | [job] validate thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:17,907 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:17,915 | INFO     | all job control threads have been joined
[2025-11-25 12:25:46] 2025-11-25 11:25:17,996 | INFO     | [data] control thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:18,181 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:18,434 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:18,439 | INFO     | [payload] control thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:18,678 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:18,852 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:18,920 | INFO     | [job] control thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:19,644 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:19,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:25:46] 2025-11-25 11:25:20,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:25:46] 2025-11-25 11:25:20,688 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:24,163 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:27,011 | INFO     | job.realtimelogging is not enabled
[2025-11-25 12:25:46] 2025-11-25 11:25:28,016 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:25:46] 2025-11-25 11:25:40,545 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:25:46] 2025-11-25 11:25:40,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111085983552)>', '<ExcThread(monitor, started 140110129514240)>']
[2025-11-25 12:25:46] 2025-11-25 11:25:45,716 | INFO     | all workflow threads have been joined
[2025-11-25 12:25:46] 2025-11-25 11:25:45,716 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:25:46] 2025-11-25 11:25:45,716 | INFO     | traces error code: 0
[2025-11-25 12:25:46] 2025-11-25 11:25:45,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:25:46] 2025-11-25 11:25:46,746 | INFO     | PID=936484 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 12:25:46] 2025-11-25 11:25:46,746 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:25:46] 2025-11-25 11:25:46,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:25:46] 2025-11-25 11:25:46,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:25:46] 2025-11-25 11:25:46,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:25:46] 2025-11-25 11:25:46,746 | CRITICAL | thread 'MainThread' is not alive
[2025-11-25 12:25:46] 2025-11-25 11:25:46,746 | INFO     | [monitor] control thread has ended
[2025-11-25 12:25:46] 2025-11-25 11:25:46,786 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:25:46] 2025-11-25 11:25:46,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:25:46] 2025-11-25 11:25:46,792 [wrapper] pilotpid: 936484
[2025-11-25 12:25:46] 2025-11-25 11:25:46,794 [wrapper] Pilot exit status: 0
[2025-11-25 12:25:46] 2025-11-25 11:25:46,800 [wrapper] pandaids: 6894281052
[2025-11-25 12:25:46] 2025-11-25 11:25:46,813 [wrapper] cleanup supervisor_pilot 1020943 936485
[2025-11-25 12:25:46] 2025-11-25 11:25:46,815 [wrapper] Test setup, not cleaning
[2025-11-25 12:25:46] 2025-11-25 11:25:46,818 [wrapper] apfmon messages muted
[2025-11-25 12:25:46] 2025-11-25 11:25:46,820 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:25:46] 2025-11-25 11:25:46,823 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:25:46]  *** Error codes and diagnostics ***
[2025-11-25 12:25:46]     "exeErrorCode": 0,
[2025-11-25 12:25:46]     "exeErrorDiag": "",
[2025-11-25 12:25:46]     "pilotErrorCode": 0,
[2025-11-25 12:25:46]     "pilotErrorDiag": "",
[2025-11-25 12:25:46]  *** Listing of results directory ***
[2025-11-25 12:25:46] total 1313332
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc    576529 Nov 21 09:27 pilot3.tar.gz
[2025-11-25 12:25:46] -rwx------ 1 boinc boinc     36292 Nov 21 10:02 runpilot2-wrapper.sh
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc      5112 Nov 21 10:02 queuedata.json
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc       100 Nov 24 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:25:46] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 23:59 run_atlas
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc       105 Nov 24 23:59 job.xml
[2025-11-25 12:25:46] -rw-r--r-- 2 boinc boinc 411872981 Nov 24 23:59 EVNT.47493127._002338.pool.root.1
[2025-11-25 12:25:46] drwxrwx--x 2 boinc boinc      4096 Nov 24 23:59 shared
[2025-11-25 12:25:46] -rw-r--r-- 2 boinc boinc    590103 Nov 24 23:59 input.tar.gz
[2025-11-25 12:25:46] -rw-r--r-- 2 boinc boinc     15847 Nov 24 23:59 start_atlas.sh
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc         0 Nov 24 23:59 boinc_setup_complete
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc      6209 Nov 24 23:59 init_data.xml
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc         0 Nov 24 23:59 boinc_lockfile
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc      2785 Nov 24 23:59 pandaJob.out
[2025-11-25 12:25:46] -rw------- 1 boinc boinc    991801 Nov 24 23:59 agis_schedconf.cvmfs.json
[2025-11-25 12:25:46] drwx------ 5 boinc boinc      4096 Nov 24 23:59 pilot3
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc       532 Nov 25 12:20 boinc_task_state.xml
[2025-11-25 12:25:46] -rw------- 1 boinc boinc 914053982 Nov 25 12:24 HITS.47533967._003095.pool.root.1
[2025-11-25 12:25:46] -rw------- 1 boinc boinc      1026 Nov 25 12:25 memory_monitor_summary.json
[2025-11-25 12:25:46] -rw------- 1 boinc boinc   1516240 Nov 25 12:25 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:25:46] -rw------- 1 boinc boinc   1230081 Nov 25 12:25 log.47533967._003095.job.log.tgz.1
[2025-11-25 12:25:46] -rw------- 1 boinc boinc      8579 Nov 25 12:25 heartbeat.json
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc      8192 Nov 25 12:25 boinc_mmap_file
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc        28 Nov 25 12:25 wrapper_checkpoint.txt
[2025-11-25 12:25:46] -rw------- 1 boinc boinc       816 Nov 25 12:25 pilotlog.txt
[2025-11-25 12:25:46] -rw------- 1 boinc boinc        95 Nov 25 12:25 pilot_heartbeat.json
[2025-11-25 12:25:46] -rw------- 1 boinc boinc   6272290 Nov 25 12:25 log.47533967._003095.job.log.1
[2025-11-25 12:25:46] -rw------- 1 boinc boinc       353 Nov 25 12:25 output.list
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc       620 Nov 25 12:25 runtime_log
[2025-11-25 12:25:46] -rw------- 1 boinc boinc   7526400 Nov 25 12:25 result.tar.gz
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc      8918 Nov 25 12:25 runtime_log.err
[2025-11-25 12:25:46] -rw------- 1 boinc boinc       669 Nov 25 12:25 6efNDm4Ccg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmEJKDmI73xNn.diag
[2025-11-25 12:25:46] -rw-r--r-- 1 boinc boinc     21174 Nov 25 12:25 stderr.txt
[2025-11-25 12:25:46] HITS file was successfully produced:
[2025-11-25 12:25:46] -rw------- 1 boinc boinc 914053982 Nov 25 12:24 shared/HITS.pool.root.1
[2025-11-25 12:25:46]  *** Contents of shared directory: ***
[2025-11-25 12:25:46] total 1302808
[2025-11-25 12:25:46] -rw-r--r-- 2 boinc boinc 411872981 Nov 24 23:59 ATLAS.root_0
[2025-11-25 12:25:46] -rw-r--r-- 2 boinc boinc    590103 Nov 24 23:59 input.tar.gz
[2025-11-25 12:25:46] -rw-r--r-- 2 boinc boinc     15847 Nov 24 23:59 start_atlas.sh
[2025-11-25 12:25:46] -rw------- 1 boinc boinc 914053982 Nov 25 12:24 HITS.pool.root.1
[2025-11-25 12:25:46] -rw------- 1 boinc boinc   7526400 Nov 25 12:25 result.tar.gz
12:25:48 (932779): run_atlas exited; CPU time 88468.782414
12:25:48 (932779): called boinc_finish(0)

</stderr_txt>
]]>

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