Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:15:23 (17557): wrapper (7.7.26015): starting
23:15:23 (17557): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:15:23] Arguments: --nthreads 8
[2025-11-24 23:15:23] Threads: 8
[2025-11-24 23:15:23] Checking for CVMFS
[2025-11-24 23:15:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:15:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:15:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:15:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:15:26] 2.11.2.0 17816 188058 133632 153260 2 17 19620757 25165824 1060 130560 13 65623953 99.875 35339143 2338 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 23:15:26] CVMFS is ok
[2025-11-24 23:15:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:15:26] Checking for apptainer binary...
[2025-11-24 23:15:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:15:26] Running /usr/bin/apptainer --version
[2025-11-24 23:15:27] apptainer version 1.3.2-1.el7
[2025-11-24 23:15:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:15:31] cg-vwn410.simple-grid.lan
[2025-11-24 23:15:31] apptainer works
[2025-11-24 23:15:31] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:15:31] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:15:31] Starting ATLAS job with PandaID=6893851959
[2025-11-24 23:15:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:22:26]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:22:26] 2025-11-25 22:21:13,325 | INFO     | .. there are 9 such processes running
[2025-11-25 23:22:26] 2025-11-25 22:21:14,327 | INFO     | time since job start (86488s) is within the limit (172800.0s)
[2025-11-25 23:22:26] 2025-11-25 22:21:15,407 | INFO     | monitor loop #5824: job 0:6893851959 is in state 'finished'
[2025-11-25 23:22:26] 2025-11-25 22:21:15,407 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:22:26] 2025-11-25 22:21:16,343 | INFO     | time since job start (86490s) is within the limit (172800.0s)
[2025-11-25 23:22:26] 2025-11-25 22:21:17,914 | INFO     | monitor loop #5825: job 0:6893851959 is in state 'finished'
[2025-11-25 23:22:26] 2025-11-25 22:21:17,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:22:26] 2025-11-25 22:21:18,350 | INFO     | time since job start (86492s) is within the limit (172800.0s)
[2025-11-25 23:22:26] 2025-11-25 22:21:20,359 | INFO     | time since job start (86494s) is within the limit (172800.0s)
[2025-11-25 23:22:26] 2025-11-25 22:21:20,424 | INFO     | monitor loop #5826: job 0:6893851959 is in state 'finished'
[2025-11-25 23:22:26] 2025-11-25 22:21:20,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:22:26] 2025-11-25 22:21:22,370 | INFO     | time since job start (86496s) is within the limit (172800.0s)
[2025-11-25 23:22:26] 2025-11-25 22:21:22,934 | INFO     | monitor loop #5827: job 0:6893851959 is in state 'finished'
[2025-11-25 23:22:26] 2025-11-25 22:21:22,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:22:26] 2025-11-25 22:21:24,378 | INFO     | time since job start (86498s) is within the limit (172800.0s)
[2025-11-25 23:22:26] 2025-11-25 22:21:24,567 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 23:22:26] 2025-11-25 22:21:24,568 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 23:22:26] 2025-11-25 22:21:24,570 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893851959/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:22:26] 2025-11-25 22:21:24,571 | INFO     | extracted standard info from prmon json
[2025-11-25 23:22:26] 2025-11-25 22:21:24,571 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:22:26] 2025-11-25 22:21:24,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:22:26] 2025-11-25 22:21:24,597 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:22:26] 2025-11-25 22:21:24,600 | INFO     | sum of square deviations: 865544625674.5052
[2025-11-25 23:22:26] 2025-11-25 22:21:24,658 | INFO     | sum of deviations: 3606648149833.392
[2025-11-25 23:22:26] 2025-11-25 22:21:24,659 | INFO     | mean x: 1764066256.712358
[2025-11-25 23:22:26] 2025-11-25 22:21:24,659 | INFO     | mean y: 2809793.2478693184
[2025-11-25 23:22:26] 2025-11-25 22:21:24,659 | INFO     | intersect: -7347898780.55565
[2025-11-25 23:22:26] 2025-11-25 22:21:24,661 | INFO     | chi2: 34.60607734877935
[2025-11-25 23:22:26] 2025-11-25 22:21:24,663 | INFO     | sum of square deviations: 856356918212.1267
[2025-11-25 23:22:26] 2025-11-25 22:21:24,723 | INFO     | sum of deviations: 4097621100595.97
[2025-11-25 23:22:26] 2025-11-25 22:21:24,724 | INFO     | mean x: 1764066104.2166786
[2025-11-25 23:22:26] 2025-11-25 22:21:24,724 | INFO     | mean y: 2817940.437633642
[2025-11-25 23:22:26] 2025-11-25 22:21:24,724 | INFO     | intersect: -8438142058.549422
[2025-11-25 23:22:26] 2025-11-25 22:21:24,726 | INFO     | chi2: 30.979727467258368
[2025-11-25 23:22:26] 2025-11-25 22:21:24,726 | INFO     | current chi2=30.979727467258368 (change=10.478939421456545 %)
[2025-11-25 23:22:26] 2025-11-25 22:21:24,726 | INFO     | right removable region: 1402
[2025-11-25 23:22:26] 2025-11-25 22:21:24,728 | INFO     | sum of square deviations: 856355876942.1271
[2025-11-25 23:22:26] 2025-11-25 22:21:24,802 | INFO     | sum of deviations: 3010447310409.755
[2025-11-25 23:22:26] 2025-11-25 22:21:24,802 | INFO     | mean x: 1764066409.2166786
[2025-11-25 23:22:26] 2025-11-25 22:21:24,802 | INFO     | mean y: 2819688.0534568783
[2025-11-25 23:22:26] 2025-11-25 22:21:24,802 | INFO     | intersect: -6198607919.325991
[2025-11-25 23:22:26] 2025-11-25 22:21:24,804 | INFO     | chi2: 29.55027882257815
[2025-11-25 23:22:26] 2025-11-25 22:21:24,804 | INFO     | current chi2=29.55027882257815 (change=14.609568357736832 %)
[2025-11-25 23:22:26] 2025-11-25 22:21:24,804 | INFO     | left removable region: 10
[2025-11-25 23:22:26] 2025-11-25 22:21:24,806 | INFO     | sum of square deviations: 836371256578.7169
[2025-11-25 23:22:26] 2025-11-25 22:21:24,856 | INFO     | sum of deviations: 3049184663421.3354
[2025-11-25 23:22:26] 2025-11-25 22:21:24,856 | INFO     | mean x: 1764066378.726293
[2025-11-25 23:22:26] 2025-11-25 22:21:24,856 | INFO     | mean y: 2838730.9719827585
[2025-11-25 23:22:26] 2025-11-25 22:21:24,856 | INFO     | intersect: -6428472848.616205
[2025-11-25 23:22:26] 2025-11-25 22:21:24,858 | INFO     | chi2: 21.024967072666055
[2025-11-25 23:22:26] 2025-11-25 22:21:24,858 | INFO     | current memory leak: 3.65 B/s (using 1392 data points, chi2=21.02)
[2025-11-25 23:22:26] 2025-11-25 22:21:24,860 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | ..............................
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | . Timing measurements:
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | . get job = 0 s
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | . initial setup = 7 s
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | . payload setup = 190 s
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | . stage-in = 0 s
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | . payload execution = 86012 s
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | . stage-out = 5 s
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | . log creation = 2 s
[2025-11-25 23:22:26] 2025-11-25 22:21:24,861 | INFO     | ..............................
[2025-11-25 23:22:26] 2025-11-25 22:21:25,209 | INFO     | 
[2025-11-25 23:22:26] 2025-11-25 22:21:25,209 | INFO     | job summary report
[2025-11-25 23:22:26] 2025-11-25 22:21:25,209 | INFO     | --------------------------------------------------
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | PanDA job id: 6893851959
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | task id: 47523449
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | errors: (none)
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | pilot state: finished 
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | transexitcode: 0
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | exeerrorcode: 0
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | exeerrordiag: 
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | exitcode: 0
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | exitmsg: OK
[2025-11-25 23:22:26] 2025-11-25 22:21:25,210 | INFO     | cpuconsumptiontime: 330882 s
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | nevents: 1000
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | neventsw: 0
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | pid: 27758
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | pgrp: 27758
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | corecount: 8
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | event service: False
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | sizes: {0: 2284083, 1: 2284338, 2: 2284338, 12: 2284366, 23: 2284394, 34: 2284422, 44: 2284578, 55: 2284606, 66: 2284634, 77: 2284662, 88: 2284718, 94: 2285288, 98
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | --------------------------------------------------
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | 
[2025-11-25 23:22:26] 2025-11-25 22:21:25,211 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-25 23:22:26] 2025-11-25 22:21:25,506 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,506 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,506 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,506 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:22:26] 2025-11-25 22:21:25,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,508 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:22:26] 2025-11-25 22:21:25,508 | INFO     | job 6893851959 has completed (purged errors)
[2025-11-25 23:22:26] 2025-11-25 22:21:25,508 | INFO     | overall cleanup function is called
[2025-11-25 23:22:26] 2025-11-25 22:21:26,533 | INFO     | --- collectZombieJob: --- 10, [27758]
[2025-11-25 23:22:26] 2025-11-25 22:21:26,533 | INFO     | zombie collector waiting for pid 27758
[2025-11-25 23:22:26] 2025-11-25 22:21:26,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:22:26] 2025-11-25 22:21:26,534 | INFO     | collected zombie processes
[2025-11-25 23:22:26] 2025-11-25 22:21:26,534 | INFO     | will attempt to kill all subprocesses of pid=27758
[2025-11-25 23:22:26] 2025-11-25 22:21:26,657 | INFO     | process IDs to be killed: [27758] (in reverse order)
[2025-11-25 23:22:26] 2025-11-25 22:21:27,305 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:22:26] 2025-11-25 22:21:27,305 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:22:26] 2025-11-25 22:21:27,309 | INFO     | did not find any defunct processes belonging to 27758
[2025-11-25 23:22:26] 2025-11-25 22:21:27,313 | INFO     | did not find any defunct processes belonging to 27758
[2025-11-25 23:22:26] 2025-11-25 22:21:27,393 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:22:26] 2025-11-25 22:21:27,394 | INFO     | ready for new job
[2025-11-25 23:22:26] 2025-11-25 22:21:27,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:22:26] 2025-11-25 22:21:27,401 | INFO     | ***************************************
[2025-11-25 23:22:26] 2025-11-25 22:21:27,401 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:22:26] 2025-11-25 22:21:27,401 | INFO     | ***************************************
[2025-11-25 23:22:26] 2025-11-25 22:21:27,401 | INFO     | 
[2025-11-25 23:22:26] 2025-11-25 22:21:27,402 | INFO     | pilot is running in a VM
[2025-11-25 23:22:26] 2025-11-25 22:21:27,402 | INFO     | architecture information:
[2025-11-25 23:22:26] 2025-11-25 22:21:27,416 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:22:26] 2025-11-25 22:21:27,654 | INFO     | cat /etc/os-release:
[2025-11-25 23:22:26] NAME="CentOS Linux"
[2025-11-25 23:22:26] VERSION="7 (Core)"
[2025-11-25 23:22:26] ID="centos"
[2025-11-25 23:22:26] ID_LIKE="rhel fedora"
[2025-11-25 23:22:26] VERSION_ID="7"
[2025-11-25 23:22:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:22:26] ANSI_COLOR="0;31"
[2025-11-25 23:22:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:22:26] HOME_URL="https://www.centos.org/"
[2025-11-25 23:22:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:22:26] 
[2025-11-25 23:22:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:22:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:22:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:22:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:22:26] 
[2025-11-25 23:22:26] 2025-11-25 22:21:27,655 | INFO     | ***************************************
[2025-11-25 23:22:26] 2025-11-25 22:21:28,158 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-25 23:22:26] 2025-11-25 22:21:28,391 | INFO     | sufficient remaining disk space (495175335936 B)
[2025-11-25 23:22:26] 2025-11-25 22:21:28,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:22:26] 2025-11-25 22:21:28,392 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:22:26] 2025-11-25 22:21:28,392 | INFO     | update_server=False
[2025-11-25 23:22:26] 2025-11-25 22:21:28,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:22:26] 2025-11-25 22:21:28,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:22:26] 2025-11-25 22:21:28,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:22:26] 2025-11-25 22:21:28,445 | INFO     | all job control threads have been joined
[2025-11-25 23:22:26] 2025-11-25 22:21:28,739 | INFO     | all payload control threads have been joined
[2025-11-25 23:22:26] 2025-11-25 22:21:28,961 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:22:26] 2025-11-25 22:21:28,961 | INFO     | aborting loop
[2025-11-25 23:22:26] 2025-11-25 22:21:29,258 | INFO     | all data control threads have been joined
[2025-11-25 23:22:26] 2025-11-25 22:21:29,398 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:29,451 | INFO     | [job] control thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:29,746 | INFO     | [payload] control thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:29,901 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:29,967 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:29,972 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:29,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:22:26] 2025-11-25 22:21:30,064 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:30,207 | INFO     | [job] validate thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:30,264 | INFO     | [data] control thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:30,392 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:30,403 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:30,434 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:30,773 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:31,000 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:32,404 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:38,675 | INFO     | job.realtimelogging is not enabled
[2025-11-25 23:22:26] 2025-11-25 22:21:39,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:22:26] 2025-11-25 22:21:57,584 | INFO     | PID=21309 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:22:26] 2025-11-25 22:21:57,585 | INFO     | .. there are 9 such processes running
[2025-11-25 23:22:26] 2025-11-25 22:21:57,586 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:22:26] 2025-11-25 22:21:57,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:22:26] 2025-11-25 22:21:57,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:22:26] 2025-11-25 22:22:15,899 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:22:26] 2025-11-25 22:22:16,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796344002368)>', '<ExcThread(monitor, started 139796034852608)>']
[2025-11-25 23:22:26] 2025-11-25 22:22:17,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:22:26] 2025-11-25 22:22:17,706 | INFO     | [monitor] control thread has ended
[2025-11-25 23:22:26] 2025-11-25 22:22:21,896 | INFO     | all workflow threads have been joined
[2025-11-25 23:22:26] 2025-11-25 22:22:21,896 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:22:26] 2025-11-25 22:22:21,897 | INFO     | traces error code: 0
[2025-11-25 23:22:26] 2025-11-25 22:22:21,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:22:26] 2025-11-25 22:22:22,362 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:22:26] 2025-11-25 22:22:22,446 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:22:26] 2025-11-25 22:22:22,558 [wrapper] pilotpid: 21309
[2025-11-25 23:22:26] 2025-11-25 22:22:22,595 [wrapper] Pilot exit status: 0
[2025-11-25 23:22:26] 2025-11-25 22:22:22,899 [wrapper] pandaids: 6893851959
[2025-11-25 23:22:26] 2025-11-25 22:22:24,026 [wrapper] cleanup supervisor_pilot  6358 21310
[2025-11-25 23:22:26] 2025-11-25 22:22:24,135 [wrapper] Test setup, not cleaning
[2025-11-25 23:22:26] 2025-11-25 22:22:24,233 [wrapper] apfmon messages muted
[2025-11-25 23:22:26] 2025-11-25 22:22:24,326 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:22:26] 2025-11-25 22:22:24,395 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:22:26]  *** Error codes and diagnostics ***
[2025-11-25 23:22:26]     "exeErrorCode": 0,
[2025-11-25 23:22:26]     "exeErrorDiag": "",
[2025-11-25 23:22:26]     "pilotErrorCode": 0,
[2025-11-25 23:22:26]     "pilotErrorDiag": "",
[2025-11-25 23:22:26]  *** Listing of results directory ***
[2025-11-25 23:22:26] total 1311476
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc      5112 Nov 20 12:45 queuedata.json
[2025-11-25 23:22:26] -rwx------. 1 boinc boinc     36292 Nov 20 12:46 runpilot2-wrapper.sh
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc       100 Nov 24 23:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:22:26] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 23:15 run_atlas
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc       105 Nov 24 23:15 job.xml
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc      6392 Nov 24 23:15 init_data.xml
[2025-11-25 23:22:26] -rw-r--r--. 2 boinc boinc 410345616 Nov 24 23:15 EVNT.47493127._000361.pool.root.1
[2025-11-25 23:22:26] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:15 start_atlas.sh
[2025-11-25 23:22:26] drwxrwx--x. 2 boinc boinc        68 Nov 24 23:15 shared
[2025-11-25 23:22:26] -rw-r--r--. 2 boinc boinc    590104 Nov 24 23:15 input.tar.gz
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc         0 Nov 24 23:15 boinc_lockfile
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc      2786 Nov 24 23:15 pandaJob.out
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc    991801 Nov 24 23:19 agis_schedconf.cvmfs.json
[2025-11-25 23:22:26] drwx------. 5 boinc boinc      4096 Nov 24 23:19 pilot3
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc       533 Nov 25 22:51 boinc_task_state.xml
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc 900577601 Nov 25 23:18 HITS.47523449._003604.pool.root.1
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc      1032 Nov 25 23:19 memory_monitor_summary.json
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc   1516240 Nov 25 23:19 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc   2508849 Nov 25 23:19 log.47523449._003604.job.log.tgz.1
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc      8630 Nov 25 23:21 heartbeat.json
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc        95 Nov 25 23:21 pilot_heartbeat.json
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc        29 Nov 25 23:22 wrapper_checkpoint.txt
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc      8192 Nov 25 23:22 boinc_mmap_file
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc      4956 Nov 25 23:22 pilotlog.txt
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc  11548634 Nov 25 23:22 log.47523449._003604.job.log.1
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc       353 Nov 25 23:22 output.list
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc       620 Nov 25 23:22 runtime_log
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc  14080000 Nov 25 23:22 result.tar.gz
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc       662 Nov 25 23:22 zaRNDmSIIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8YGKDmxFg0Ao.diag
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc      8817 Nov 25 23:22 runtime_log.err
[2025-11-25 23:22:26] -rw-r--r--. 1 boinc boinc     21371 Nov 25 23:22 stderr.txt
[2025-11-25 23:22:26] HITS file was successfully produced:
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc 900577601 Nov 25 23:18 shared/HITS.pool.root.1
[2025-11-25 23:22:26]  *** Contents of shared directory: ***
[2025-11-25 23:22:26] total 1294552
[2025-11-25 23:22:26] -rw-r--r--. 2 boinc boinc 410345616 Nov 24 23:15 ATLAS.root_0
[2025-11-25 23:22:26] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:15 start_atlas.sh
[2025-11-25 23:22:26] -rw-r--r--. 2 boinc boinc    590104 Nov 24 23:15 input.tar.gz
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc 900577601 Nov 25 23:18 HITS.pool.root.1
[2025-11-25 23:22:26] -rw-------. 1 boinc boinc  14080000 Nov 25 23:22 result.tar.gz
23:22:28 (17557): run_atlas exited; CPU time 331362.527167
23:22:28 (17557): called boinc_finish(0)

</stderr_txt>
]]>

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