Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:14:29 (14921): wrapper (7.7.26015): starting
21:14:29 (14921): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:14:29] Arguments: --nthreads 8
[2025-11-21 21:14:29] Threads: 8
[2025-11-21 21:14:29] Checking for CVMFS
[2025-11-21 21:14:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:14:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:14:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:14:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:14:29] 2.11.2.0 2776 36704 80748 153154 2 82 20052062 20275200 1 130560 0 3734099 99.641 1940378 26947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 21:14:29] CVMFS is ok
[2025-11-21 21:14:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 21:14:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 21:14:29] Further information can be found at the LHC@home message board.
[2025-11-21 21:14:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:14:29] Checking for apptainer binary...
[2025-11-21 21:14:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 21:14:29] Running /usr/bin/apptainer --version
[2025-11-21 21:14:30] apptainer version 1.3.2-1.el7
[2025-11-21 21:14:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:14:31] c-115-7.aglt2.org
[2025-11-21 21:14:31] apptainer works
[2025-11-21 21:14:31] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:14:31] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:14:31] Starting ATLAS job with PandaID=6892540271
[2025-11-21 21:14:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 08:03:17]  *** The last 200 lines of the pilot log: ***
[2025-11-22 08:03:17] 2025-11-22 13:02:44,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,331 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 08:03:17] 2025-11-22 13:02:44,334 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-22 08:03:17] 2025-11-22 13:02:44,337 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892540271/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,338 | INFO     | extracted standard info from prmon json
[2025-11-22 08:03:17] 2025-11-22 13:02:44,338 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 08:03:17] 2025-11-22 13:02:44,338 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 08:03:17] 2025-11-22 13:02:44,348 | INFO     | fitting pss+swap vs Time
[2025-11-22 08:03:17] 2025-11-22 13:02:44,349 | INFO     | sum of square deviations: 80148831982.67513
[2025-11-22 08:03:17] 2025-11-22 13:02:44,356 | INFO     | sum of deviations: 722733556660.4886
[2025-11-22 08:03:17] 2025-11-22 13:02:44,356 | INFO     | mean x: 1763797118.6405025
[2025-11-22 08:03:17] 2025-11-22 13:02:44,356 | INFO     | mean y: 3201593.8492935635
[2025-11-22 08:03:17] 2025-11-22 13:02:44,357 | INFO     | intersect: -15901651081.460085
[2025-11-22 08:03:17] 2025-11-22 13:02:44,357 | INFO     | chi2: 5.7473241389440615
[2025-11-22 08:03:17] 2025-11-22 13:02:44,358 | INFO     | sum of square deviations: 78276400380.60757
[2025-11-22 08:03:17] 2025-11-22 13:02:44,365 | INFO     | sum of deviations: 944869335326.4753
[2025-11-22 08:03:17] 2025-11-22 13:02:44,366 | INFO     | mean x: 1763796966.1455696
[2025-11-22 08:03:17] 2025-11-22 13:02:44,366 | INFO     | mean y: 3219677.7231012657
[2025-11-22 08:03:17] 2025-11-22 13:02:44,366 | INFO     | intersect: -21287458725.338673
[2025-11-22 08:03:17] 2025-11-22 13:02:44,366 | INFO     | chi2: 2.942840790929867
[2025-11-22 08:03:17] 2025-11-22 13:02:44,367 | INFO     | current chi2=2.942840790929867 (change=48.79633165303696 %)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,367 | INFO     | sum of square deviations: 76433326248.80714
[2025-11-22 08:03:17] 2025-11-22 13:02:44,375 | INFO     | sum of deviations: 973351859667.4554
[2025-11-22 08:03:17] 2025-11-22 13:02:44,375 | INFO     | mean x: 1763796813.6491227
[2025-11-22 08:03:17] 2025-11-22 13:02:44,375 | INFO     | mean y: 3222020.9202551832
[2025-11-22 08:03:17] 2025-11-22 13:02:44,375 | INFO     | intersect: -22458117723.111874
[2025-11-22 08:03:17] 2025-11-22 13:02:44,376 | INFO     | chi2: 2.7652830834091575
[2025-11-22 08:03:17] 2025-11-22 13:02:44,376 | INFO     | current chi2=2.7652830834091575 (change=6.03354785851685 %)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,376 | INFO     | right removable region: 626
[2025-11-22 08:03:17] 2025-11-22 13:02:44,377 | INFO     | sum of square deviations: 78276151500.60751
[2025-11-22 08:03:17] 2025-11-22 13:02:44,385 | INFO     | sum of deviations: 512801860612.87976
[2025-11-22 08:03:17] 2025-11-22 13:02:44,385 | INFO     | mean x: 1763797271.1455696
[2025-11-22 08:03:17] 2025-11-22 13:02:44,385 | INFO     | mean y: 3218660.1534810127
[2025-11-22 08:03:17] 2025-11-22 13:02:44,385 | INFO     | intersect: -11551750574.382126
[2025-11-22 08:03:17] 2025-11-22 13:02:44,386 | INFO     | chi2: 3.1701722966031722
[2025-11-22 08:03:17] 2025-11-22 13:02:44,386 | INFO     | current chi2=3.1701722966031722 (change=44.84089952188396 %)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,387 | INFO     | sum of square deviations: 76432982453.39716
[2025-11-22 08:03:17] 2025-11-22 13:02:44,394 | INFO     | sum of deviations: 461530125133.69775
[2025-11-22 08:03:17] 2025-11-22 13:02:44,394 | INFO     | mean x: 1763797423.645933
[2025-11-22 08:03:17] 2025-11-22 13:02:44,394 | INFO     | mean y: 3222899.822966507
[2025-11-22 08:03:17] 2025-11-22 13:02:44,395 | INFO     | intersect: -10647226938.924885
[2025-11-22 08:03:17] 2025-11-22 13:02:44,395 | INFO     | chi2: 3.0912001693548463
[2025-11-22 08:03:17] 2025-11-22 13:02:44,395 | INFO     | current chi2=3.0912001693548463 (change=2.491098901247237 %)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,395 | INFO     | left removable region: 20
[2025-11-22 08:03:17] 2025-11-22 13:02:44,396 | INFO     | sum of square deviations: 69007564106.79228
[2025-11-22 08:03:17] 2025-11-22 13:02:44,403 | INFO     | sum of deviations: 648422054815.7632
[2025-11-22 08:03:17] 2025-11-22 13:02:44,403 | INFO     | mean x: 1763797393.1584158
[2025-11-22 08:03:17] 2025-11-22 13:02:44,403 | INFO     | mean y: 3249179.7524752477
[2025-11-22 08:03:17] 2025-11-22 13:02:44,403 | INFO     | intersect: -16570080784.19992
[2025-11-22 08:03:17] 2025-11-22 13:02:44,404 | INFO     | chi2: 0.05417870191484612
[2025-11-22 08:03:17] 2025-11-22 13:02:44,404 | INFO     | current memory leak: 9.40 B/s (using 606 data points, chi2=0.05)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,405 | INFO     | could have reported an average CPU frequency of 2382 MHz (25 samples)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,405 | INFO     | ..............................
[2025-11-22 08:03:17] 2025-11-22 13:02:44,405 | INFO     | . Timing measurements:
[2025-11-22 08:03:17] 2025-11-22 13:02:44,405 | INFO     | . get job = 0 s
[2025-11-22 08:03:17] 2025-11-22 13:02:44,405 | INFO     | . initial setup = 2 s
[2025-11-22 08:03:17] 2025-11-22 13:02:44,405 | INFO     | . payload setup = 8 s
[2025-11-22 08:03:17] 2025-11-22 13:02:44,405 | INFO     | . stage-in = 0 s
[2025-11-22 08:03:17] 2025-11-22 13:02:44,405 | INFO     | . payload execution = 38834 s
[2025-11-22 08:03:17] 2025-11-22 13:02:44,405 | INFO     | . stage-out = 3 s
[2025-11-22 08:03:17] 2025-11-22 13:02:44,406 | INFO     | . log creation = 0 s
[2025-11-22 08:03:17] 2025-11-22 13:02:44,406 | INFO     | ..............................
[2025-11-22 08:03:17] 2025-11-22 13:02:44,486 | INFO     | 
[2025-11-22 08:03:17] 2025-11-22 13:02:44,486 | INFO     | job summary report
[2025-11-22 08:03:17] 2025-11-22 13:02:44,486 | INFO     | --------------------------------------------------
[2025-11-22 08:03:17] 2025-11-22 13:02:44,486 | INFO     | PanDA job id: 6892540271
[2025-11-22 08:03:17] 2025-11-22 13:02:44,487 | INFO     | task id: 47493029
[2025-11-22 08:03:17] 2025-11-22 13:02:44,487 | INFO     | errors: (none)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,487 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 08:03:17] 2025-11-22 13:02:44,487 | INFO     | pilot state: finished 
[2025-11-22 08:03:17] 2025-11-22 13:02:44,487 | INFO     | transexitcode: 0
[2025-11-22 08:03:17] 2025-11-22 13:02:44,487 | INFO     | exeerrorcode: 0
[2025-11-22 08:03:17] 2025-11-22 13:02:44,488 | INFO     | exeerrordiag: 
[2025-11-22 08:03:17] 2025-11-22 13:02:44,488 | INFO     | exitcode: 0
[2025-11-22 08:03:17] 2025-11-22 13:02:44,488 | INFO     | exitmsg: OK
[2025-11-22 08:03:17] 2025-11-22 13:02:44,488 | INFO     | cpuconsumptiontime: 302206 s
[2025-11-22 08:03:17] 2025-11-22 13:02:44,488 | INFO     | nevents: 1000
[2025-11-22 08:03:17] 2025-11-22 13:02:44,489 | INFO     | neventsw: 0
[2025-11-22 08:03:17] 2025-11-22 13:02:44,489 | INFO     | pid: 25710
[2025-11-22 08:03:17] 2025-11-22 13:02:44,489 | INFO     | pgrp: 25710
[2025-11-22 08:03:17] 2025-11-22 13:02:44,489 | INFO     | corecount: 8
[2025-11-22 08:03:17] 2025-11-22 13:02:44,489 | INFO     | event service: False
[2025-11-22 08:03:17] 2025-11-22 13:02:44,489 | INFO     | sizes: {0: 2298619, 1: 2298818, 6: 2299080, 11: 2299108, 38846: 2342236, 38847: 2342235, 38851: 2351469, 38859: 2351723}
[2025-11-22 08:03:17] 2025-11-22 13:02:44,489 | INFO     | --------------------------------------------------
[2025-11-22 08:03:17] 2025-11-22 13:02:44,489 | INFO     | 
[2025-11-22 08:03:17] 2025-11-22 13:02:44,489 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 08:03:17] 2025-11-22 13:02:44,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,519 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 08:03:17] 2025-11-22 13:02:44,520 | INFO     | job 6892540271 has completed (purged errors)
[2025-11-22 08:03:17] 2025-11-22 13:02:44,520 | INFO     | overall cleanup function is called
[2025-11-22 08:03:17] 2025-11-22 13:02:45,535 | INFO     | --- collectZombieJob: --- 10, [25710]
[2025-11-22 08:03:17] 2025-11-22 13:02:45,536 | INFO     | zombie collector waiting for pid 25710
[2025-11-22 08:03:17] 2025-11-22 13:02:45,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 08:03:17] 2025-11-22 13:02:45,536 | INFO     | collected zombie processes
[2025-11-22 08:03:17] 2025-11-22 13:02:45,536 | INFO     | will attempt to kill all subprocesses of pid=25710
[2025-11-22 08:03:17] 2025-11-22 13:02:45,622 | INFO     | process IDs to be killed: [25710] (in reverse order)
[2025-11-22 08:03:17] 2025-11-22 13:02:45,682 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 08:03:17] 2025-11-22 13:02:45,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 08:03:17] 2025-11-22 13:02:45,686 | INFO     | did not find any defunct processes belonging to 25710
[2025-11-22 08:03:17] 2025-11-22 13:02:45,690 | INFO     | did not find any defunct processes belonging to 25710
[2025-11-22 08:03:17] 2025-11-22 13:02:45,693 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 08:03:17] 2025-11-22 13:02:45,693 | INFO     | ready for new job
[2025-11-22 08:03:17] 2025-11-22 13:02:45,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 08:03:17] 2025-11-22 13:02:45,697 | INFO     | ***************************************
[2025-11-22 08:03:17] 2025-11-22 13:02:45,697 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 08:03:17] 2025-11-22 13:02:45,697 | INFO     | ***************************************
[2025-11-22 08:03:17] 2025-11-22 13:02:45,697 | INFO     | 
[2025-11-22 08:03:17] 2025-11-22 13:02:45,698 | INFO     | architecture information:
[2025-11-22 08:03:17] 2025-11-22 13:02:45,699 | INFO     | executing command: cat /etc/os-release
[2025-11-22 08:03:17] 2025-11-22 13:02:45,718 | INFO     | cat /etc/os-release:
[2025-11-22 08:03:17] NAME="CentOS Linux"
[2025-11-22 08:03:17] VERSION="7 (Core)"
[2025-11-22 08:03:17] ID="centos"
[2025-11-22 08:03:17] ID_LIKE="rhel fedora"
[2025-11-22 08:03:17] VERSION_ID="7"
[2025-11-22 08:03:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 08:03:17] ANSI_COLOR="0;31"
[2025-11-22 08:03:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 08:03:17] HOME_URL="https://www.centos.org/"
[2025-11-22 08:03:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 08:03:17] 
[2025-11-22 08:03:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 08:03:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 08:03:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 08:03:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 08:03:17] 
[2025-11-22 08:03:17] 2025-11-22 13:02:45,718 | INFO     | ***************************************
[2025-11-22 08:03:17] 2025-11-22 13:02:46,220 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 08:03:17] 2025-11-22 13:02:46,241 | INFO     | sufficient remaining disk space (17480810496 B)
[2025-11-22 08:03:17] 2025-11-22 13:02:46,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 08:03:17] 2025-11-22 13:02:46,241 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 08:03:17] 2025-11-22 13:02:46,242 | INFO     | update_server=False
[2025-11-22 08:03:17] 2025-11-22 13:02:46,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 08:03:17] 2025-11-22 13:02:46,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:03:17] 2025-11-22 13:02:46,566 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 08:03:17] 2025-11-22 13:02:46,566 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 08:03:17] 2025-11-22 13:02:46,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:03:17] 2025-11-22 13:02:46,567 | INFO     | will abort loop
[2025-11-22 08:03:17] 2025-11-22 13:02:46,656 | INFO     | all data control threads have been joined
[2025-11-22 08:03:17] 2025-11-22 13:02:46,999 | INFO     | all payload control threads have been joined
[2025-11-22 08:03:17] 2025-11-22 13:02:47,248 | INFO     | [job] retrieve thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:47,248 | INFO     | [job] queue monitor thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:47,294 | INFO     | all job control threads have been joined
[2025-11-22 08:03:17] 2025-11-22 13:02:47,336 | INFO     | [payload] failed_post thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:47,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 08:03:17] 2025-11-22 13:02:47,572 | INFO     | [job] job monitor thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:47,619 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 08:03:17] 2025-11-22 13:02:47,662 | INFO     | [data] control thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:47,765 | INFO     | [data] copytool_in thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:47,775 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:47,897 | INFO     | [payload] validate_post thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:48,003 | INFO     | [payload] control thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:48,300 | INFO     | [job] control thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:48,384 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:48,525 | INFO     | [job] validate thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:48,681 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:49,545 | INFO     | [data] copytool_out thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:51,626 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:52,796 | INFO     | [monitor] cgroup control has ended
[2025-11-22 08:03:17] 2025-11-22 13:02:57,015 | INFO     | job.realtimelogging is not enabled
[2025-11-22 08:03:17] 2025-11-22 13:02:58,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 08:03:17] 2025-11-22 13:02:58,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199496705856)>', '<ExcThread(monitor, started 140198335739648)>']
[2025-11-22 08:03:17] 2025-11-22 13:03:03,315 | INFO     | all workflow threads have been joined
[2025-11-22 08:03:17] 2025-11-22 13:03:03,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 08:03:17] 2025-11-22 13:03:03,316 | INFO     | traces error code: 0
[2025-11-22 08:03:17] 2025-11-22 13:03:03,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 08:03:17] 2025-11-22 13:03:17,223 | INFO     | PID=19176 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 08:03:17] 2025-11-22 13:03:17,227 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 08:03:17] 2025-11-22 13:03:17,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 08:03:17] 2025-11-22 13:03:17,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 08:03:17] 2025-11-22 13:03:17,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 08:03:17] 2025-11-22 13:03:17,229 | INFO     | [monitor] control thread has ended
[2025-11-22 08:03:17] 2025-11-22 13:03:17,357 [wrapper] ==== pilot stdout END ====
[2025-11-22 08:03:17] 2025-11-22 13:03:17,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 08:03:17] 2025-11-22 13:03:17,367 [wrapper] pilotpid: 19176
[2025-11-22 08:03:17] 2025-11-22 13:03:17,371 [wrapper] Pilot exit status: 0
[2025-11-22 08:03:17] 2025-11-22 13:03:17,386 [wrapper] pandaids: 6892540271
[2025-11-22 08:03:17] 2025-11-22 13:03:17,429 [wrapper] cleanup supervisor_pilot  4250 19177
[2025-11-22 08:03:17] 2025-11-22 13:03:17,434 [wrapper] Test setup, not cleaning
[2025-11-22 08:03:17] 2025-11-22 13:03:17,439 [wrapper] apfmon messages muted
[2025-11-22 08:03:17] 2025-11-22 13:03:17,444 [wrapper] ==== wrapper stdout END ====
[2025-11-22 08:03:17] 2025-11-22 13:03:17,448 [wrapper] ==== wrapper stderr END ====
[2025-11-22 08:03:17]  *** Error codes and diagnostics ***
[2025-11-22 08:03:17]     "exeErrorCode": 0,
[2025-11-22 08:03:17]     "exeErrorDiag": "",
[2025-11-22 08:03:17]     "pilotErrorCode": 0,
[2025-11-22 08:03:17]     "pilotErrorDiag": "",
[2025-11-22 08:03:17]  *** Listing of results directory ***
[2025-11-22 08:03:17] total 1305560
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 02:27 pilot3.tar.gz
[2025-11-22 08:03:17] -rwx------ 1 boincer umatlas     36292 Nov 19 02:30 runpilot2-wrapper.sh
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 02:30 queuedata.json
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas       100 Nov 21 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 08:03:17] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 21:14 run_atlas
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas       105 Nov 21 21:14 job.xml
[2025-11-22 08:03:17] -rw-r--r-- 2 boincer umatlas 410306805 Nov 21 21:14 EVNT.47493027._000227.pool.root.1
[2025-11-22 08:03:17] -rw-r--r-- 2 boincer umatlas     15120 Nov 21 21:14 start_atlas.sh
[2025-11-22 08:03:17] drwxrwx--x 2 boincer umatlas      4096 Nov 21 21:14 shared
[2025-11-22 08:03:17] -rw-r--r-- 2 boincer umatlas    590094 Nov 21 21:14 input.tar.gz
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas         0 Nov 21 21:14 boinc_lockfile
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas      2770 Nov 21 21:14 pandaJob.out
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas    989798 Nov 21 21:14 agis_schedconf.cvmfs.json
[2025-11-22 08:03:17] drwx------ 5 boincer umatlas      4096 Nov 21 21:14 pilot3
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas       533 Nov 22 07:55 boinc_task_state.xml
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas      5911 Nov 22 08:00 init_data.xml
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas 908106173 Nov 22 08:01 HITS.47493029._002221.pool.root.1
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas      1064 Nov 22 08:02 memory_monitor_summary.json
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas   1526164 Nov 22 08:02 agis_ddmendpoints.agis.ALL.json
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas   1905537 Nov 22 08:02 log.47493029._002221.job.log.tgz.1
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas      8669 Nov 22 08:02 heartbeat.json
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas        29 Nov 22 08:03 wrapper_checkpoint.txt
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 08:03 boinc_mmap_file
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas        95 Nov 22 08:03 pilot_heartbeat.json
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas       745 Nov 22 08:03 pilotlog.txt
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas   5374623 Nov 22 08:03 log.47493029._002221.job.log.1
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas       353 Nov 22 08:03 output.list
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas       620 Nov 22 08:03 runtime_log
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas   7301120 Nov 22 08:03 result.tar.gz
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas      8699 Nov 22 08:03 runtime_log.err
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas       666 Nov 22 08:03 q8ANDmAprf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZ1FKDmNoo4tm.diag
[2025-11-22 08:03:17] -rw-r--r-- 1 boincer umatlas     21276 Nov 22 08:03 stderr.txt
[2025-11-22 08:03:17] HITS file was successfully produced:
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas 908106173 Nov 22 08:01 shared/HITS.pool.root.1
[2025-11-22 08:03:17]  *** Contents of shared directory: ***
[2025-11-22 08:03:17] total 1295248
[2025-11-22 08:03:17] -rw-r--r-- 2 boincer umatlas 410306805 Nov 21 21:14 ATLAS.root_0
[2025-11-22 08:03:17] -rw-r--r-- 2 boincer umatlas     15120 Nov 21 21:14 start_atlas.sh
[2025-11-22 08:03:17] -rw-r--r-- 2 boincer umatlas    590094 Nov 21 21:14 input.tar.gz
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas 908106173 Nov 22 08:01 HITS.pool.root.1
[2025-11-22 08:03:17] -rw------- 1 boincer umatlas   7301120 Nov 22 08:03 result.tar.gz
08:03:19 (14921): run_atlas exited; CPU time 300337.611752
08:03:19 (14921): called boinc_finish(0)

</stderr_txt>
]]>

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