Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:26:38 (3946020): wrapper (7.7.26015): starting
18:26:38 (3946020): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 18:26:38] Arguments: --nthreads 12
[2025-11-21 18:26:38] Threads: 12
[2025-11-21 18:26:38] Checking for CVMFS
[2025-11-21 18:26:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 18:26:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 18:26:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 18:26:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 18:26:39] 2.11.5.0 1674450 21892 215992 153155 0 206 27267420 45568001 17492 130560 0 194458500 99.772 124221469 24133 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-21 18:26:39] CVMFS is ok
[2025-11-21 18:26:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 18:26:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 18:26:39] Further information can be found at the LHC@home message board.
[2025-11-21 18:26:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 18:26:39] Checking for apptainer binary...
[2025-11-21 18:26:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 18:26:39] Running /usr/bin/apptainer --version
[2025-11-21 18:26:39] apptainer version 1.4.1-1.el9
[2025-11-21 18:26:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 18:26:39] wns0069.triumf.lcg
[2025-11-21 18:26:39] apptainer works
[2025-11-21 18:26:39] Set ATHENA_PROC_NUMBER=12
[2025-11-21 18:26:39] Set ATHENA_CORE_NUMBER=12
[2025-11-21 18:26:39] Starting ATLAS job with PandaID=6895327981
[2025-11-21 18:26:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 18:32:01]  *** The last 200 lines of the pilot log: ***
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | wrong length of table data, x=[1763778458.0, 1763778519.0], y=[1069.0, 454562.0] (must be same and length>=4)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,539 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,539 | INFO     | ..............................
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . Timing measurements:
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . get job = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . initial setup = 3 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . payload setup = 10 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . stage-in = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . payload execution = 95 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . stage-out = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . log creation = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | ..............................
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 18:32:01] 2025-11-22 02:31:12,541 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895327981/pilotlog.txt
[2025-11-21 18:32:01] 2025-11-22 02:31:12,555 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 18:32:01] - Log from pilotlog.txt -
[2025-11-21 18:32:01] 2025-11-22 02:31:12,537 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895327981/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,537 | INFO     | extracted standard info from prmon json
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | wrong length of table data, x=[1763778458.0, 1763778519.0], y=[1069.0, 454562.0] (must be same and length>=4)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,539 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,539 | INFO     | ..............................
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . Timing measurements:
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . get job = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . initial setup = 3 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . payload setup = 10 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . stage-in = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . payload execution = 95 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . stage-out = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . log creation = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | ..............................
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 18:32:01] 2025-11-22 02:31:12,541 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895327981/pilotlog.txt
[2025-11-21 18:32:01] 2025-11-22 02:31:12,555 | WARNING  | 
[2025-11-21 18:32:01] [begin log extracts]
[2025-11-21 18:32:01] - Log from pilotlog.txt -
[2025-11-21 18:32:01] 2025-11-22 02:31:12,537 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895327981/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,537 | INFO     | extracted standard info from prmon json
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 18:32:01] 2025-11-22 02:31:12,538 | WARNING  | wrong length of table data, x=[1763778458.0, 1763778519.0], y=[1069.0, 454562.0] (must be same and length>=4)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,539 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,539 | INFO     | ..............................
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . Timing measurements:
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . get job = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . initial setup = 3 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . payload setup = 10 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . stage-in = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . payload execution = 95 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . stage-out = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | . log creation = 0 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | ..............................
[2025-11-21 18:32:01] 2025-11-22 02:31:12,540 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 18:32:01] 2025-11-22 02:31:12,541 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895327981/pilotlog.txt
[2025-11-21 18:32:01] [end log extracts]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,555 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,556 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 18:32:01] 2025-11-22 02:31:12,621 | INFO     | 
[2025-11-21 18:32:01] 2025-11-22 02:31:12,622 | INFO     | job summary report
[2025-11-21 18:32:01] 2025-11-22 02:31:12,622 | INFO     | --------------------------------------------------
[2025-11-21 18:32:01] 2025-11-22 02:31:12,622 | INFO     | PanDA job id: 6895327981
[2025-11-21 18:32:01] 2025-11-22 02:31:12,622 | INFO     | task id: 47556137
[2025-11-21 18:32:01] 2025-11-22 02:31:12,622 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 18:28:57,870 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 18:32:01] 2025-11-22 02:31:12,622 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-21 18:32:01] 2025-11-22 02:31:12,622 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 18:32:01] 2025-11-22 02:31:12,622 | INFO     | pilot state: failed 
[2025-11-21 18:32:01] 2025-11-22 02:31:12,622 | INFO     | transexitcode: 65
[2025-11-21 18:32:01] 2025-11-22 02:31:12,623 | INFO     | exeerrorcode: 65
[2025-11-21 18:32:01] 2025-11-22 02:31:12,623 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-21 18:32:01] 2025-11-22 02:31:12,623 | INFO     | exitcode: 65
[2025-11-21 18:32:01] 2025-11-22 02:31:12,623 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | cpuconsumptiontime: 45 s
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | nevents: 0
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | neventsw: 0
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | pid: 3971252
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | pgrp: 3971252
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | corecount: 12
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | event service: False
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | sizes: {0: 2298800, 1: 2298828, 9: 2299090, 11: 2299118, 110: 2324621, 112: 2328911, 113: 2329095, 237: 2329261}
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | --------------------------------------------------
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | 
[2025-11-21 18:32:01] 2025-11-22 02:31:12,624 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 18:32:01] 2025-11-22 02:31:12,654 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,656 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,656 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 18:32:01] 2025-11-22 02:31:12,656 | INFO     | job 6895327981 has completed (purged errors)
[2025-11-21 18:32:01] 2025-11-22 02:31:12,656 | INFO     | overall cleanup function is called
[2025-11-21 18:32:01] 2025-11-22 02:31:13,666 | INFO     | --- collectZombieJob: --- 10, [3971252]
[2025-11-21 18:32:01] 2025-11-22 02:31:13,667 | INFO     | zombie collector waiting for pid 3971252
[2025-11-21 18:32:01] 2025-11-22 02:31:13,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 18:32:01] 2025-11-22 02:31:13,667 | INFO     | collected zombie processes
[2025-11-21 18:32:01] 2025-11-22 02:31:13,667 | INFO     | will attempt to kill all subprocesses of pid=3971252
[2025-11-21 18:32:01] 2025-11-22 02:31:13,850 | INFO     | process IDs to be killed: [3971252] (in reverse order)
[2025-11-21 18:32:01] 2025-11-22 02:31:13,927 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 18:32:01] 2025-11-22 02:31:13,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 18:32:01] 2025-11-22 02:31:13,938 | INFO     | did not find any defunct processes belonging to 3971252
[2025-11-21 18:32:01] 2025-11-22 02:31:13,948 | INFO     | did not find any defunct processes belonging to 3971252
[2025-11-21 18:32:01] 2025-11-22 02:31:13,949 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 18:32:01] 2025-11-22 02:31:13,949 | INFO     | ready for new job
[2025-11-21 18:32:01] 2025-11-22 02:31:13,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 18:32:01] 2025-11-22 02:31:13,951 | INFO     | ***************************************
[2025-11-21 18:32:01] 2025-11-22 02:31:13,951 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 18:32:01] 2025-11-22 02:31:13,951 | INFO     | ***************************************
[2025-11-21 18:32:01] 2025-11-22 02:31:13,951 | INFO     | 
[2025-11-21 18:32:01] 2025-11-22 02:31:13,953 | INFO     | architecture information:
[2025-11-21 18:32:01] 2025-11-22 02:31:13,954 | INFO     | executing command: cat /etc/os-release
[2025-11-21 18:32:01] 2025-11-22 02:31:13,966 | INFO     | cat /etc/os-release:
[2025-11-21 18:32:01] NAME="CentOS Linux"
[2025-11-21 18:32:01] VERSION="7 (Core)"
[2025-11-21 18:32:01] ID="centos"
[2025-11-21 18:32:01] ID_LIKE="rhel fedora"
[2025-11-21 18:32:01] VERSION_ID="7"
[2025-11-21 18:32:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 18:32:01] ANSI_COLOR="0;31"
[2025-11-21 18:32:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 18:32:01] HOME_URL="https://www.centos.org/"
[2025-11-21 18:32:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 18:32:01] 
[2025-11-21 18:32:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 18:32:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 18:32:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 18:32:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 18:32:01] 
[2025-11-21 18:32:01] 2025-11-22 02:31:13,967 | INFO     | ***************************************
[2025-11-21 18:32:01] 2025-11-22 02:31:14,470 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 18:32:01] 2025-11-22 02:31:14,489 | INFO     | sufficient remaining disk space (1054026498048 B)
[2025-11-21 18:32:01] 2025-11-22 02:31:14,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 18:32:01] 2025-11-22 02:31:14,489 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 18:32:01] 2025-11-22 02:31:14,490 | INFO     | update_server=False
[2025-11-21 18:32:01] 2025-11-22 02:31:14,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 18:32:01] 2025-11-22 02:31:14,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:32:01] 2025-11-22 02:31:14,740 | INFO     | all data control threads have been joined
[2025-11-21 18:32:01] 2025-11-22 02:31:15,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:32:01] 2025-11-22 02:31:15,004 | INFO     | aborting loop
[2025-11-21 18:32:01] 2025-11-22 02:31:15,343 | INFO     | all payload control threads have been joined
[2025-11-21 18:32:01] 2025-11-22 02:31:15,495 | INFO     | [job] queue monitor thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:15,496 | INFO     | [job] retrieve thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:15,667 | INFO     | all job control threads have been joined
[2025-11-21 18:32:01] 2025-11-22 02:31:15,682 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:15,691 | INFO     | [payload] failed_post thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:15,746 | INFO     | [data] control thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:15,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 18:32:01] 2025-11-22 02:31:16,005 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:16,009 | INFO     | [job] job monitor thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:16,103 | INFO     | [job] validate thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:16,112 | INFO     | [data] copytool_in thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:16,328 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:16,348 | INFO     | [payload] control thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:16,496 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:16,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 18:32:01] 2025-11-22 02:31:16,673 | INFO     | [job] control thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:16,773 | INFO     | [payload] validate_post thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:17,920 | INFO     | [data] copytool_out thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:20,668 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 18:32:01] 2025-11-22 02:31:44,672 | INFO     | PID=3958018 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 18:32:01] 2025-11-22 02:31:44,673 | INFO     | .. there are 27 such processes running
[2025-11-21 18:32:01] 2025-11-22 02:31:44,673 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 18:32:01] 2025-11-22 02:31:44,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 18:32:01] 2025-11-22 02:31:44,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 18:32:01] 2025-11-22 02:31:56,011 | INFO     | [monitor] cgroup control has ended
[2025-11-21 18:32:01] 2025-11-22 02:31:56,523 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566286542656)>', '<ExcThread(monitor, started 140565748377344)>']
[2025-11-21 18:32:01] 2025-11-22 02:31:56,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 18:32:01] 2025-11-22 02:31:56,741 | INFO     | [monitor] control thread has ended
[2025-11-21 18:32:01] 2025-11-22 02:32:01,548 | INFO     | all workflow threads have been joined
[2025-11-21 18:32:01] 2025-11-22 02:32:01,549 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 18:32:01] 2025-11-22 02:32:01,549 | INFO     | traces error code: 0
[2025-11-21 18:32:01] 2025-11-22 02:32:01,549 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 18:32:01] 2025-11-22 02:32:01,677 [wrapper] ==== pilot stdout END ====
[2025-11-21 18:32:01] 2025-11-22 02:32:01,686 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 18:32:01] 2025-11-22 02:32:01,702 [wrapper] pilotpid: 3958018
[2025-11-21 18:32:01] 2025-11-22 02:32:01,730 [wrapper] Pilot exit status: 0
[2025-11-21 18:32:01] 2025-11-22 02:32:01,784 [wrapper] pandaids: 6895327981
[2025-11-21 18:32:01] 2025-11-22 02:32:01,905 [wrapper] cleanup supervisor_pilot 3958033 3958019
[2025-11-21 18:32:01] 2025-11-22 02:32:01,910 [wrapper] Test setup, not cleaning
[2025-11-21 18:32:01] 2025-11-22 02:32:01,913 [wrapper] apfmon messages muted
[2025-11-21 18:32:01] 2025-11-22 02:32:01,916 [wrapper] ==== wrapper stdout END ====
[2025-11-21 18:32:01] 2025-11-22 02:32:01,918 [wrapper] ==== wrapper stderr END ====
[2025-11-21 18:32:01]  *** Error codes and diagnostics ***
[2025-11-21 18:32:01]     "exeErrorCode": 65,
[2025-11-21 18:32:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-21 18:32:01]     "pilotErrorCode": 1305,
[2025-11-21 18:32:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-21 18:32:01]  *** Listing of results directory ***
[2025-11-21 18:32:01] total 405992
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc    576529 Nov 21 07:53 pilot3.tar.gz
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc      5112 Nov 21 08:11 queuedata.json
[2025-11-21 18:32:01] -rwx------. 1 boinc boinc     36292 Nov 21 08:11 runpilot2-wrapper.sh
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc       100 Nov 21 18:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 18:32:01] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 18:26 run_atlas
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc       105 Nov 21 18:26 job.xml
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc      6595 Nov 21 18:26 init_data.xml
[2025-11-21 18:32:01] -rw-r--r--. 2 boinc boinc 411509342 Nov 21 18:26 EVNT.47483658._000056.pool.root.1
[2025-11-21 18:32:01] -rw-r--r--. 2 boinc boinc     15847 Nov 21 18:26 start_atlas.sh
[2025-11-21 18:32:01] drwxrwx--x. 2 boinc boinc      4096 Nov 21 18:26 shared
[2025-11-21 18:32:01] -rw-r--r--. 2 boinc boinc    590101 Nov 21 18:26 input.tar.gz
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc         0 Nov 21 18:26 boinc_lockfile
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc      2784 Nov 21 18:26 pandaJob.out
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc    989776 Nov 21 18:26 agis_schedconf.cvmfs.json
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc   1526164 Nov 21 18:26 agis_ddmendpoints.agis.ALL.json
[2025-11-21 18:32:01] drwx------. 5 boinc boinc      4096 Nov 21 18:26 pilot3
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc       524 Nov 21 18:28 boinc_task_state.xml
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc      1001 Nov 21 18:29 memory_monitor_summary.json
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc     49826 Nov 21 18:29 log.47556137._000560.job.log.tgz.1
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc        95 Nov 21 18:30 pilot_heartbeat.json
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc     10335 Nov 21 18:31 heartbeat.json
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc      8192 Nov 21 18:31 boinc_mmap_file
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc        23 Nov 21 18:31 wrapper_checkpoint.txt
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc      4823 Nov 21 18:32 pilotlog.txt
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc     99614 Nov 21 18:32 log.47556137._000560.job.log.1
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc       186 Nov 21 18:32 output.list
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc       620 Nov 21 18:32 runtime_log
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc    174080 Nov 21 18:32 result.tar.gz
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc      8636 Nov 21 18:32 runtime_log.err
[2025-11-21 18:32:01] -rw-------. 1 boinc boinc       644 Nov 21 18:32 LOHODmauig8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1iHKDmxKLnnn.diag
[2025-11-21 18:32:01] -rw-r--r--. 1 boinc boinc     22484 Nov 21 18:32 stderr.txt
[2025-11-21 18:32:02] No HITS result produced
[2025-11-21 18:32:02]  *** Contents of shared directory: ***
[2025-11-21 18:32:02] total 402640
[2025-11-21 18:32:02] -rw-r--r--. 2 boinc boinc 411509342 Nov 21 18:26 ATLAS.root_0
[2025-11-21 18:32:02] -rw-r--r--. 2 boinc boinc     15847 Nov 21 18:26 start_atlas.sh
[2025-11-21 18:32:02] -rw-r--r--. 2 boinc boinc    590101 Nov 21 18:26 input.tar.gz
[2025-11-21 18:32:02] -rw-------. 1 boinc boinc    174080 Nov 21 18:32 result.tar.gz
18:32:03 (3946020): run_atlas exited; CPU time 45.285775
18:32:03 (3946020): called boinc_finish(0)

</stderr_txt>
]]>

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