Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:24:59 (14595): wrapper (7.7.26015): starting
22:24:59 (14595): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:24:59] Arguments: --nthreads 8
[2025-11-24 22:24:59] Threads: 8
[2025-11-24 22:24:59] Checking for CVMFS
[2025-11-24 22:25:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:25:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:25:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:25:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:25:02] 2.11.2.0 6428 282853 140140 153259 2 84 13484216 25165825 1027 130560 10 140281078 99.873 86989029 3118 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 22:25:02] CVMFS is ok
[2025-11-24 22:25:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:25:02] Checking for apptainer binary...
[2025-11-24 22:25:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:25:02] Running /usr/bin/apptainer --version
[2025-11-24 22:25:02] apptainer version 1.3.2-1.el7
[2025-11-24 22:25:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:25:27] cg-vwn335.simple-grid.lan
[2025-11-24 22:25:27] apptainer works
[2025-11-24 22:25:27] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:25:27] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:25:27] Starting ATLAS job with PandaID=6894279268
[2025-11-24 22:25:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:43:52]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:43:52] 2025-11-25 21:43:03,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:43:52] 2025-11-25 21:43:05,751 | INFO     | time since job start (87180s) is within the limit (172800.0s)
[2025-11-25 22:43:52] 2025-11-25 21:43:06,380 | INFO     | monitor loop #5864: job 0:6894279268 is in state 'finished'
[2025-11-25 22:43:52] 2025-11-25 21:43:06,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:43:52] 2025-11-25 21:43:07,760 | INFO     | time since job start (87182s) is within the limit (172800.0s)
[2025-11-25 22:43:52] 2025-11-25 21:43:08,885 | INFO     | monitor loop #5865: job 0:6894279268 is in state 'finished'
[2025-11-25 22:43:52] 2025-11-25 21:43:08,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:43:52] 2025-11-25 21:43:09,771 | INFO     | time since job start (87184s) is within the limit (172800.0s)
[2025-11-25 22:43:52] 2025-11-25 21:43:11,395 | INFO     | monitor loop #5866: job 0:6894279268 is in state 'finished'
[2025-11-25 22:43:52] 2025-11-25 21:43:11,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:43:52] 2025-11-25 21:43:11,777 | INFO     | time since job start (87186s) is within the limit (172800.0s)
[2025-11-25 22:43:52] 2025-11-25 21:43:12,959 | INFO     | PID=18316 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 22:43:52] 2025-11-25 21:43:12,960 | INFO     | .. there are 9 such processes running
[2025-11-25 22:43:52] 2025-11-25 21:43:13,900 | INFO     | monitor loop #5867: job 0:6894279268 is in state 'finished'
[2025-11-25 22:43:52] 2025-11-25 21:43:13,901 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:43:52] 2025-11-25 21:43:13,962 | INFO     | time since job start (87188s) is within the limit (172800.0s)
[2025-11-25 22:43:52] 2025-11-25 21:43:14,760 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 22:43:52] 2025-11-25 21:43:14,762 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 22:43:52] 2025-11-25 21:43:14,763 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6894279268/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:43:52] 2025-11-25 21:43:14,765 | INFO     | extracted standard info from prmon json
[2025-11-25 22:43:52] 2025-11-25 21:43:14,765 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:43:52] 2025-11-25 21:43:14,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:43:52] 2025-11-25 21:43:14,800 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:43:52] 2025-11-25 21:43:14,802 | INFO     | sum of square deviations: 885985760070.454
[2025-11-25 22:43:52] 2025-11-25 21:43:14,892 | INFO     | sum of deviations: 3540982654195.5376
[2025-11-25 22:43:52] 2025-11-25 21:43:14,892 | INFO     | mean x: 1764063601.1811135
[2025-11-25 22:43:52] 2025-11-25 21:43:14,892 | INFO     | mean y: 2816531.6321353065
[2025-11-25 22:43:52] 2025-11-25 21:43:14,892 | INFO     | intersect: -7047543524.023062
[2025-11-25 22:43:52] 2025-11-25 21:43:14,894 | INFO     | chi2: 31.910662844832142
[2025-11-25 22:43:52] 2025-11-25 21:43:14,896 | INFO     | sum of square deviations: 876653659050.9535
[2025-11-25 22:43:52] 2025-11-25 21:43:14,954 | INFO     | sum of deviations: 3993364729119.987
[2025-11-25 22:43:52] 2025-11-25 21:43:14,955 | INFO     | mean x: 1764063448.6852899
[2025-11-25 22:43:52] 2025-11-25 21:43:14,955 | INFO     | mean y: 2823922.734794908
[2025-11-25 22:43:52] 2025-11-25 21:43:14,955 | INFO     | intersect: -8032902253.935568
[2025-11-25 22:43:52] 2025-11-25 21:43:14,957 | INFO     | chi2: 28.810946493259223
[2025-11-25 22:43:52] 2025-11-25 21:43:14,957 | INFO     | current chi2=28.810946493259223 (change=9.713732261362008 %)
[2025-11-25 22:43:52] 2025-11-25 21:43:14,957 | INFO     | right removable region: 1413
[2025-11-25 22:43:52] 2025-11-25 21:43:14,959 | INFO     | sum of square deviations: 876652636690.9543
[2025-11-25 22:43:52] 2025-11-25 21:43:15,016 | INFO     | sum of deviations: 2944423771617.584
[2025-11-25 22:43:52] 2025-11-25 21:43:15,017 | INFO     | mean x: 1764063753.6852899
[2025-11-25 22:43:52] 2025-11-25 21:43:15,017 | INFO     | mean y: 2826279.0664780764
[2025-11-25 22:43:52] 2025-11-25 21:43:15,017 | INFO     | intersect: -5922155901.567747
[2025-11-25 22:43:52] 2025-11-25 21:43:15,019 | INFO     | chi2: 27.023259245998915
[2025-11-25 22:43:52] 2025-11-25 21:43:15,019 | INFO     | current chi2=27.023259245998915 (change=15.315894948966037 %)
[2025-11-25 22:43:52] 2025-11-25 21:43:15,019 | INFO     | left removable region: 10
[2025-11-25 22:43:52] 2025-11-25 21:43:15,021 | INFO     | sum of square deviations: 856352170375.8778
[2025-11-25 22:43:52] 2025-11-25 21:43:15,073 | INFO     | sum of deviations: 2958538589813.7935
[2025-11-25 22:43:52] 2025-11-25 21:43:15,074 | INFO     | mean x: 1764063723.194583
[2025-11-25 22:43:52] 2025-11-25 21:43:15,074 | INFO     | mean y: 2844414.6564504635
[2025-11-25 22:43:52] 2025-11-25 21:43:15,074 | INFO     | intersect: -6091669945.797589
[2025-11-25 22:43:52] 2025-11-25 21:43:15,075 | INFO     | chi2: 19.179855028496974
[2025-11-25 22:43:52] 2025-11-25 21:43:15,076 | INFO     | current memory leak: 3.45 B/s (using 1403 data points, chi2=19.18)
[2025-11-25 22:43:52] 2025-11-25 21:43:15,078 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | ..............................
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | . Timing measurements:
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | . get job = 0 s
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | . initial setup = 8 s
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | . payload setup = 165 s
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | . stage-in = 0 s
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | . payload execution = 86699 s
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | . stage-out = 5 s
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | . log creation = 2 s
[2025-11-25 22:43:52] 2025-11-25 21:43:15,079 | INFO     | ..............................
[2025-11-25 22:43:52] 2025-11-25 21:43:15,199 | INFO     | 
[2025-11-25 22:43:52] 2025-11-25 21:43:15,200 | INFO     | job summary report
[2025-11-25 22:43:52] 2025-11-25 21:43:15,200 | INFO     | --------------------------------------------------
[2025-11-25 22:43:52] 2025-11-25 21:43:15,200 | INFO     | PanDA job id: 6894279268
[2025-11-25 22:43:52] 2025-11-25 21:43:15,200 | INFO     | task id: 47533967
[2025-11-25 22:43:52] 2025-11-25 21:43:15,200 | INFO     | errors: (none)
[2025-11-25 22:43:52] 2025-11-25 21:43:15,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:43:52] 2025-11-25 21:43:15,200 | INFO     | pilot state: finished 
[2025-11-25 22:43:52] 2025-11-25 21:43:15,200 | INFO     | transexitcode: 0
[2025-11-25 22:43:52] 2025-11-25 21:43:15,200 | INFO     | exeerrorcode: 0
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | exeerrordiag: 
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | exitcode: 0
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | exitmsg: OK
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | cpuconsumptiontime: 332613 s
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | nevents: 1000
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | neventsw: 0
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | pid: 24797
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | pgrp: 24797
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | corecount: 8
[2025-11-25 22:43:52] 2025-11-25 21:43:15,201 | INFO     | event service: False
[2025-11-25 22:43:52] 2025-11-25 21:43:15,202 | INFO     | sizes: {0: 2284083, 1: 2284338, 2: 2284338, 12: 2284366, 23: 2284394, 34: 2284422, 45: 2284578, 55: 2284606, 66: 2284634, 77: 2284662, 88: 2284718, 98: 2285228, 99
[2025-11-25 22:43:52] 2025-11-25 21:43:15,202 | INFO     | --------------------------------------------------
[2025-11-25 22:43:52] 2025-11-25 21:43:15,202 | INFO     | 
[2025-11-25 22:43:52] 2025-11-25 21:43:15,202 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-25 22:43:52] 2025-11-25 21:43:15,767 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,767 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,769 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:43:52] 2025-11-25 21:43:15,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:43:52] 2025-11-25 21:43:15,770 | INFO     | job 6894279268 has completed (purged errors)
[2025-11-25 22:43:52] 2025-11-25 21:43:15,770 | INFO     | overall cleanup function is called
[2025-11-25 22:43:52] 2025-11-25 21:43:16,790 | INFO     | --- collectZombieJob: --- 10, [24797]
[2025-11-25 22:43:52] 2025-11-25 21:43:16,790 | INFO     | zombie collector waiting for pid 24797
[2025-11-25 22:43:52] 2025-11-25 21:43:16,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:43:52] 2025-11-25 21:43:16,791 | INFO     | collected zombie processes
[2025-11-25 22:43:52] 2025-11-25 21:43:16,791 | INFO     | will attempt to kill all subprocesses of pid=24797
[2025-11-25 22:43:52] 2025-11-25 21:43:16,927 | INFO     | process IDs to be killed: [24797] (in reverse order)
[2025-11-25 22:43:52] 2025-11-25 21:43:18,073 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:43:52] 2025-11-25 21:43:18,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:43:52] 2025-11-25 21:43:18,077 | INFO     | did not find any defunct processes belonging to 24797
[2025-11-25 22:43:52] 2025-11-25 21:43:18,080 | INFO     | did not find any defunct processes belonging to 24797
[2025-11-25 22:43:52] 2025-11-25 21:43:18,153 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:43:52] 2025-11-25 21:43:18,153 | INFO     | ready for new job
[2025-11-25 22:43:52] 2025-11-25 21:43:18,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:43:52] 2025-11-25 21:43:18,159 | INFO     | ***************************************
[2025-11-25 22:43:52] 2025-11-25 21:43:18,160 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:43:52] 2025-11-25 21:43:18,160 | INFO     | ***************************************
[2025-11-25 22:43:52] 2025-11-25 21:43:18,160 | INFO     | 
[2025-11-25 22:43:52] 2025-11-25 21:43:18,161 | INFO     | pilot is running in a VM
[2025-11-25 22:43:52] 2025-11-25 21:43:18,161 | INFO     | architecture information:
[2025-11-25 22:43:52] 2025-11-25 21:43:18,169 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:43:52] 2025-11-25 21:43:18,382 | INFO     | cat /etc/os-release:
[2025-11-25 22:43:52] NAME="CentOS Linux"
[2025-11-25 22:43:52] VERSION="7 (Core)"
[2025-11-25 22:43:52] ID="centos"
[2025-11-25 22:43:52] ID_LIKE="rhel fedora"
[2025-11-25 22:43:52] VERSION_ID="7"
[2025-11-25 22:43:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:43:52] ANSI_COLOR="0;31"
[2025-11-25 22:43:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:43:52] HOME_URL="https://www.centos.org/"
[2025-11-25 22:43:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:43:52] 
[2025-11-25 22:43:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:43:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:43:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:43:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:43:52] 
[2025-11-25 22:43:52] 2025-11-25 21:43:18,382 | INFO     | ***************************************
[2025-11-25 22:43:52] 2025-11-25 21:43:18,887 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-25 22:43:52] 2025-11-25 21:43:18,999 | INFO     | sufficient remaining disk space (494851325952 B)
[2025-11-25 22:43:52] 2025-11-25 21:43:19,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:43:52] 2025-11-25 21:43:19,000 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:43:52] 2025-11-25 21:43:19,000 | INFO     | update_server=False
[2025-11-25 22:43:52] 2025-11-25 21:43:19,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:43:52] 2025-11-25 21:43:19,249 | INFO     | all data control threads have been joined
[2025-11-25 22:43:52] 2025-11-25 21:43:19,404 | INFO     | all job control threads have been joined
[2025-11-25 22:43:52] 2025-11-25 21:43:19,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:43:52] 2025-11-25 21:43:19,766 | INFO     | all payload control threads have been joined
[2025-11-25 22:43:52] 2025-11-25 21:43:19,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:43:52] 2025-11-25 21:43:19,939 | INFO     | aborting loop
[2025-11-25 22:43:52] 2025-11-25 21:43:20,007 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,107 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:43:52] 2025-11-25 21:43:20,256 | INFO     | [data] control thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,360 | INFO     | [job] validate thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,411 | INFO     | [job] control thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,429 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,526 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,772 | INFO     | [payload] control thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,814 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,945 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:20,993 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:21,046 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:21,222 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:21,388 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:43:52] 2025-11-25 21:43:21,422 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:25,397 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:43:52] 2025-11-25 21:43:36,480 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:43:52] 2025-11-25 21:43:37,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946561300288)>', '<ExcThread(monitor, started 139946123843328)>']
[2025-11-25 22:43:52] 2025-11-25 21:43:42,993 | INFO     | all workflow threads have been joined
[2025-11-25 22:43:52] 2025-11-25 21:43:42,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:43:52] 2025-11-25 21:43:42,994 | INFO     | traces error code: 0
[2025-11-25 22:43:52] 2025-11-25 21:43:42,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:43:52] 2025-11-25 21:43:47,192 | INFO     | PID=18316 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 22:43:52] 2025-11-25 21:43:47,192 | INFO     | .. there are 9 such processes running
[2025-11-25 22:43:52] 2025-11-25 21:43:47,194 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:43:52] 2025-11-25 21:43:47,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:43:52] 2025-11-25 21:43:47,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:43:52] 2025-11-25 21:43:47,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:43:52] 2025-11-25 21:43:47,195 | INFO     | [monitor] control thread has ended
[2025-11-25 22:43:52] 2025-11-25 21:43:47,637 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:43:52] 2025-11-25 21:43:47,708 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:43:52] 2025-11-25 21:43:47,820 [wrapper] pilotpid: 18316
[2025-11-25 22:43:52] 2025-11-25 21:43:47,931 [wrapper] Pilot exit status: 0
[2025-11-25 22:43:52] 2025-11-25 21:43:48,336 [wrapper] pandaids: 6894279268
[2025-11-25 22:43:52] 2025-11-25 21:43:49,105 [wrapper] cleanup supervisor_pilot 16271 18317
[2025-11-25 22:43:52] 2025-11-25 21:43:49,159 [wrapper] Test setup, not cleaning
[2025-11-25 22:43:52] 2025-11-25 21:43:49,235 [wrapper] apfmon messages muted
[2025-11-25 22:43:52] 2025-11-25 21:43:49,304 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:43:52] 2025-11-25 21:43:49,397 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:43:52]  *** Error codes and diagnostics ***
[2025-11-25 22:43:52]     "exeErrorCode": 0,
[2025-11-25 22:43:52]     "exeErrorDiag": "",
[2025-11-25 22:43:52]     "pilotErrorCode": 0,
[2025-11-25 22:43:52]     "pilotErrorDiag": "",
[2025-11-25 22:43:52]  *** Listing of results directory ***
[2025-11-25 22:43:52] total 1326684
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc    576529 Nov 21 09:27 pilot3.tar.gz
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc      5112 Nov 21 09:52 queuedata.json
[2025-11-25 22:43:52] -rwx------. 1 boinc boinc     36292 Nov 21 09:52 runpilot2-wrapper.sh
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc       100 Nov 24 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:43:52] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 22:24 run_atlas
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc       105 Nov 24 22:24 job.xml
[2025-11-25 22:43:52] -rw-r--r--. 2 boinc boinc 409077657 Nov 24 22:24 EVNT.47493127._002332.pool.root.1
[2025-11-25 22:43:52] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:24 start_atlas.sh
[2025-11-25 22:43:52] drwxrwx--x. 2 boinc boinc        68 Nov 24 22:24 shared
[2025-11-25 22:43:52] -rw-r--r--. 2 boinc boinc    590104 Nov 24 22:24 input.tar.gz
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc      6391 Nov 24 22:24 init_data.xml
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc         0 Nov 24 22:24 boinc_lockfile
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc      2786 Nov 24 22:25 pandaJob.out
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc    991801 Nov 24 22:29 agis_schedconf.cvmfs.json
[2025-11-25 22:43:52] drwx------. 5 boinc boinc      4096 Nov 24 22:30 pilot3
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc       533 Nov 25 22:13 boinc_task_state.xml
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc 917285093 Nov 25 22:39 HITS.47533967._003035.pool.root.1
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc      1033 Nov 25 22:41 memory_monitor_summary.json
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc   1516240 Nov 25 22:41 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc   2500226 Nov 25 22:41 log.47533967._003035.job.log.tgz.1
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc      7962 Nov 25 22:43 heartbeat.json
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc      8192 Nov 25 22:43 boinc_mmap_file
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc        29 Nov 25 22:43 wrapper_checkpoint.txt
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc        95 Nov 25 22:43 pilot_heartbeat.json
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc       820 Nov 25 22:43 pilotlog.txt
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc  11629049 Nov 25 22:43 log.47533967._003035.job.log.1
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc       353 Nov 25 22:43 output.list
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc       620 Nov 25 22:43 runtime_log
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc  14151680 Nov 25 22:43 result.tar.gz
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc      8817 Nov 25 22:43 runtime_log.err
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc       662 Nov 25 22:43 ByzLDm13bg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwTHKDmbrT6Vn.diag
[2025-11-25 22:43:52] -rw-r--r--. 1 boinc boinc     21523 Nov 25 22:43 stderr.txt
[2025-11-25 22:43:52] HITS file was successfully produced:
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc 917285093 Nov 25 22:39 shared/HITS.pool.root.1
[2025-11-25 22:43:52]  *** Contents of shared directory: ***
[2025-11-25 22:43:52] total 1309696
[2025-11-25 22:43:52] -rw-r--r--. 2 boinc boinc 409077657 Nov 24 22:24 ATLAS.root_0
[2025-11-25 22:43:52] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:24 start_atlas.sh
[2025-11-25 22:43:52] -rw-r--r--. 2 boinc boinc    590104 Nov 24 22:24 input.tar.gz
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc 917285093 Nov 25 22:39 HITS.pool.root.1
[2025-11-25 22:43:52] -rw-------. 1 boinc boinc  14151680 Nov 25 22:43 result.tar.gz
22:43:53 (14595): run_atlas exited; CPU time 333076.091949
22:43:53 (14595): called boinc_finish(0)

</stderr_txt>
]]>

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