Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:04:11 (1562537): wrapper (7.7.26015): starting
13:04:11 (1562537): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 13:04:11] Arguments: --nthreads 3
[2025-11-27 13:04:11] Threads: 3
[2025-11-27 13:04:11] Checking for CVMFS
[2025-11-27 13:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 13:04:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 13:04:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 13:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 13:04:11] 2.9.2.0 4064095 12755 95336 153362 2 81 10533589 36864000 0 130560 0 4716743 99.940 629139 5284 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 13:04:11] CVMFS is ok
[2025-11-27 13:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 13:04:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 13:04:11] Further information can be found at the LHC@home message board.
[2025-11-27 13:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 13:04:11] Checking for apptainer binary...
[2025-11-27 13:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 13:04:11] Running /usr/bin/apptainer --version
[2025-11-27 13:04:11] apptainer version 1.4.1-1.1
[2025-11-27 13:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 13:04:11] thA371a
[2025-11-27 13:04:11] apptainer works
[2025-11-27 13:04:11] Set ATHENA_PROC_NUMBER=3
[2025-11-27 13:04:11] Set ATHENA_CORE_NUMBER=3
[2025-11-27 13:04:11] Starting ATLAS job with PandaID=6894279222
[2025-11-27 13:04:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:04:56]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:04:56] 2025-11-27 20:04:15,206 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,308 | INFO     | [job] validate thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,334 | INFO     | [job] control thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,335 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,401 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,417 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,818 | INFO     | [data] control thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,883 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,895 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,895 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:15,977 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:16,306 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:16,503 [wrapper] supervise_pilot (15 min periods counter: 33)
[2025-11-27 21:04:56] 2025-11-27 20:04:17,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:04:56] 2025-11-27 20:04:21,026 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:04:56] 2025-11-27 20:04:44,937 | INFO     | PID=1566258 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:04:56] 2025-11-27 20:04:44,937 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:04:56] 2025-11-27 20:04:44,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:04:56] 2025-11-27 20:04:44,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:04:56] 2025-11-27 20:04:50,727 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:04:56] 2025-11-27 20:04:51,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441568544576)>', '<ExcThread(monitor, started 140440900712192)>']
[2025-11-27 21:04:56] 2025-11-27 20:04:51,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:04:56] 2025-11-27 20:04:51,972 | INFO     | [monitor] control thread has ended
[2025-11-27 21:04:56] 2025-11-27 20:04:56,186 | INFO     | all workflow threads have been joined
[2025-11-27 21:04:56] 2025-11-27 20:04:56,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:04:56] 2025-11-27 20:04:56,186 | INFO     | traces error code: 0
[2025-11-27 21:04:56] 2025-11-27 20:04:56,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:04:56] 2025-11-27 20:04:56,237 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:04:56] 2025-11-27 20:04:56,240 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:04:56] 2025-11-27 20:04:56,242 [wrapper] pilotpid: 1566258
[2025-11-27 21:04:56] 2025-11-27 20:04:56,244 [wrapper] Pilot exit status: 0
[2025-11-27 21:04:56] 2025-11-27 20:04:56,251 [wrapper] pandaids: 6894279222
[2025-11-27 21:04:56] 2025-11-27 20:04:56,268 [wrapper] cleanup supervisor_pilot 1625498 1566259
[2025-11-27 21:04:56] 2025-11-27 20:04:56,270 [wrapper] Test setup, not cleaning
[2025-11-27 21:04:56] 2025-11-27 20:04:56,272 [wrapper] apfmon messages muted
[2025-11-27 21:04:56] 2025-11-27 20:04:56,275 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:04:56] 2025-11-27 20:04:56,277 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:04:56]  *** Error codes and diagnostics ***
[2025-11-27 21:04:56]     "exeErrorCode": 0,
[2025-11-27 21:04:56]     "exeErrorDiag": "",
[2025-11-27 21:04:56]     "pilotErrorCode": 0,
[2025-11-27 21:04:56]     "pilotErrorDiag": "",
[2025-11-27 21:04:56]  *** Listing of results directory ***
[2025-11-27 21:04:56] total 1304360
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc    576529 Nov 21 09:27 pilot3.tar.gz
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc      5112 Nov 21 09:42 queuedata.json
[2025-11-27 21:04:56] -rwx------ 1 boinc boinc     36292 Nov 21 09:43 runpilot2-wrapper.sh
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc       100 Nov 27 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:04:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 13:04 run_atlas
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc       105 Nov 27 13:04 job.xml
[2025-11-27 21:04:56] -rw-r--r-- 2 boinc boinc 410445742 Nov 27 13:04 EVNT.47493127._002327.pool.root.1
[2025-11-27 21:04:56] -rw-r--r-- 2 boinc boinc    590103 Nov 27 13:04 input.tar.gz
[2025-11-27 21:04:56] -rw-r--r-- 2 boinc boinc     15847 Nov 27 13:04 start_atlas.sh
[2025-11-27 21:04:56] drwxrwx--x 2 boinc boinc      4096 Nov 27 13:04 shared
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc         0 Nov 27 13:04 boinc_setup_complete
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc      6441 Nov 27 13:04 init_data.xml
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc         0 Nov 27 13:04 boinc_lockfile
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc      2786 Nov 27 13:04 pandaJob.out
[2025-11-27 21:04:56] -rw------- 1 boinc boinc    991572 Nov 27 13:04 agis_schedconf.cvmfs.json
[2025-11-27 21:04:56] drwx------ 5 boinc boinc      4096 Nov 27 13:04 pilot3
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc       532 Nov 27 20:59 boinc_task_state.xml
[2025-11-27 21:04:56] -rw------- 1 boinc boinc 910842020 Nov 27 21:03 HITS.47533967._002990.pool.root.1
[2025-11-27 21:04:56] -rw------- 1 boinc boinc      1027 Nov 27 21:03 memory_monitor_summary.json
[2025-11-27 21:04:56] -rw------- 1 boinc boinc   1516240 Nov 27 21:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:04:56] -rw------- 1 boinc boinc   1175640 Nov 27 21:04 log.47533967._002990.job.log.tgz.1
[2025-11-27 21:04:56] -rw------- 1 boinc boinc      8567 Nov 27 21:04 heartbeat.json
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc      8192 Nov 27 21:04 boinc_mmap_file
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc        28 Nov 27 21:04 wrapper_checkpoint.txt
[2025-11-27 21:04:56] -rw------- 1 boinc boinc        95 Nov 27 21:04 pilot_heartbeat.json
[2025-11-27 21:04:56] -rw------- 1 boinc boinc      4752 Nov 27 21:04 pilotlog.txt
[2025-11-27 21:04:56] -rw------- 1 boinc boinc   4059622 Nov 27 21:04 log.47533967._002990.job.log.1
[2025-11-27 21:04:56] -rw------- 1 boinc boinc       353 Nov 27 21:04 output.list
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc       620 Nov 27 21:04 runtime_log
[2025-11-27 21:04:56] -rw------- 1 boinc boinc   5253120 Nov 27 21:04 result.tar.gz
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc      8903 Nov 27 21:04 runtime_log.err
[2025-11-27 21:04:56] -rw------- 1 boinc boinc       666 Nov 27 21:04 VE9MDm7ubg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhDJKDmHXDZen.diag
[2025-11-27 21:04:56] -rw-r--r-- 1 boinc boinc      6245 Nov 27 21:04 stderr.txt
[2025-11-27 21:04:56] HITS file was successfully produced:
[2025-11-27 21:04:56] -rw------- 1 boinc boinc 910842020 Nov 27 21:03 shared/HITS.pool.root.1
[2025-11-27 21:04:56]  *** Contents of shared directory: ***
[2025-11-27 21:04:56] total 1296060
[2025-11-27 21:04:56] -rw-r--r-- 2 boinc boinc 410445742 Nov 27 13:04 ATLAS.root_0
[2025-11-27 21:04:56] -rw-r--r-- 2 boinc boinc    590103 Nov 27 13:04 input.tar.gz
[2025-11-27 21:04:56] -rw-r--r-- 2 boinc boinc     15847 Nov 27 13:04 start_atlas.sh
[2025-11-27 21:04:56] -rw------- 1 boinc boinc 910842020 Nov 27 21:03 HITS.pool.root.1
[2025-11-27 21:04:56] -rw------- 1 boinc boinc   5253120 Nov 27 21:04 result.tar.gz
21:04:57 (1562537): run_atlas exited; CPU time 84919.353128
21:04:57 (1562537): called boinc_finish(0)

</stderr_txt>
]]>

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