Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
20:38:18 (911031): wrapper (7.7.26015): starting
20:38:18 (911031): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 20:38:18] Arguments: --nthreads 4
[2025-11-21 20:38:18] Threads: 4
[2025-11-21 20:38:18] Checking for CVMFS
[2025-11-21 20:38:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 20:38:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 20:38:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 20:38:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 20:38:24] 2.13.3.0 911241 0 24944 153155 3 1 1614850 4096001 0 130560 0 0 0.000 1292 684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-21 20:38:24] CVMFS is ok
[2025-11-21 20:38:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 20:38:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 20:38:24] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 20:38:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 20:38:24] Further information can be found at the LHC@home message board.
[2025-11-21 20:38:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 20:38:24] Checking for apptainer binary...
[2025-11-21 20:38:24] apptainer is not installed, using version from CVMFS
[2025-11-21 20:38:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 20:38:24] yy
[2025-11-21 20:38:24] apptainer works
[2025-11-21 20:38:24] Set ATHENA_PROC_NUMBER=4
[2025-11-21 20:38:24] Set ATHENA_CORE_NUMBER=4
[2025-11-21 20:38:24] Starting ATLAS job with PandaID=6894276339
[2025-11-21 20:38:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 03:55:42]  *** The last 200 lines of the pilot log: ***
[2025-11-22 03:55:42] 2025-11-22 09:55:09,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 03:55:42] 2025-11-22 09:55:09,955 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 03:55:42] 2025-11-22 09:55:09,957 | INFO     | found 48 cores (48 cores per socket, 1 socket) , CPU MHz: 2494.138000000002
[2025-11-22 03:55:42] 2025-11-22 09:55:09,960 | INFO     | using path: /data/boinc/slots/4/PanDA_Pilot-6894276339/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 03:55:42] 2025-11-22 09:55:09,960 | INFO     | extracted standard info from prmon json
[2025-11-22 03:55:42] 2025-11-22 09:55:09,960 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 03:55:42] 2025-11-22 09:55:09,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 03:55:42] 2025-11-22 09:55:09,963 | INFO     | fitting pss+swap vs Time
[2025-11-22 03:55:42] 2025-11-22 09:55:09,963 | INFO     | sum of square deviations: 24482059030.0
[2025-11-22 03:55:42] 2025-11-22 09:55:09,965 | INFO     | sum of deviations: 117104321291.99998
[2025-11-22 03:55:42] 2025-11-22 09:55:09,965 | INFO     | mean x: 1763792192.0
[2025-11-22 03:55:42] 2025-11-22 09:55:09,965 | INFO     | mean y: 2308317.121212121
[2025-11-22 03:55:42] 2025-11-22 09:55:09,965 | INFO     | intersect: -8434387603.397077
[2025-11-22 03:55:42] 2025-11-22 09:55:09,965 | INFO     | chi2: 2.675709515532002
[2025-11-22 03:55:42] 2025-11-22 09:55:09,966 | INFO     | sum of square deviations: 23635978050.0
[2025-11-22 03:55:42] 2025-11-22 09:55:09,967 | INFO     | sum of deviations: 163375617287.99997
[2025-11-22 03:55:42] 2025-11-22 09:55:09,967 | INFO     | mean x: 1763792039.5
[2025-11-22 03:55:42] 2025-11-22 09:55:09,967 | INFO     | mean y: 2316602.933962264
[2025-11-22 03:55:42] 2025-11-22 09:55:09,967 | INFO     | intersect: -12189292841.422115
[2025-11-22 03:55:42] 2025-11-22 09:55:09,968 | INFO     | chi2: 1.5341915556452526
[2025-11-22 03:55:42] 2025-11-22 09:55:09,968 | INFO     | current chi2=1.5341915556452526 (change=42.66225288135529 %)
[2025-11-22 03:55:42] 2025-11-22 09:55:09,968 | INFO     | sum of square deviations: 22809618370.0
[2025-11-22 03:55:42] 2025-11-22 09:55:09,970 | INFO     | sum of deviations: 159008732025.00003
[2025-11-22 03:55:42] 2025-11-22 09:55:09,970 | INFO     | mean x: 1763791887.0
[2025-11-22 03:55:42] 2025-11-22 09:55:09,970 | INFO     | mean y: 2315796.968973747
[2025-11-22 03:55:42] 2025-11-22 09:55:09,970 | INFO     | intersect: -12293300331.21319
[2025-11-22 03:55:42] 2025-11-22 09:55:09,970 | INFO     | chi2: 1.534396196253415
[2025-11-22 03:55:42] 2025-11-22 09:55:09,970 | INFO     | current chi2=1.534396196253415 (change=-0.013338660834716918 %)
[2025-11-22 03:55:42] 2025-11-22 09:55:09,970 | INFO     | right removable region: 418
[2025-11-22 03:55:42] 2025-11-22 09:55:09,970 | INFO     | sum of square deviations: 23635978050.0
[2025-11-22 03:55:42] 2025-11-22 09:55:09,972 | INFO     | sum of deviations: 55477905612.49996
[2025-11-22 03:55:42] 2025-11-22 09:55:09,972 | INFO     | mean x: 1763792344.5
[2025-11-22 03:55:42] 2025-11-22 09:55:09,972 | INFO     | mean y: 2319362.978773585
[2025-11-22 03:55:42] 2025-11-22 09:55:09,972 | INFO     | intersect: -4137619547.153232
[2025-11-22 03:55:42] 2025-11-22 09:55:09,972 | INFO     | chi2: 1.219676130126992
[2025-11-22 03:55:42] 2025-11-22 09:55:09,972 | INFO     | current chi2=1.219676130126992 (change=54.416721133329446 %)
[2025-11-22 03:55:42] 2025-11-22 09:55:09,973 | INFO     | sum of square deviations: 22809618370.0
[2025-11-22 03:55:42] 2025-11-22 09:55:09,974 | INFO     | sum of deviations: 54979409129.000015
[2025-11-22 03:55:42] 2025-11-22 09:55:09,974 | INFO     | mean x: 1763792497.0
[2025-11-22 03:55:42] 2025-11-22 09:55:09,974 | INFO     | mean y: 2319453.861575179
[2025-11-22 03:55:42] 2025-11-22 09:55:09,974 | INFO     | intersect: -4249056774.281059
[2025-11-22 03:55:42] 2025-11-22 09:55:09,974 | INFO     | chi2: 1.2184834549775336
[2025-11-22 03:55:42] 2025-11-22 09:55:09,974 | INFO     | current chi2=1.2184834549775336 (change=0.09778621717670587 %)
[2025-11-22 03:55:42] 2025-11-22 09:55:09,974 | INFO     | left removable region: 20
[2025-11-22 03:55:42] 2025-11-22 09:55:09,975 | INFO     | sum of square deviations: 19549015839.5
[2025-11-22 03:55:42] 2025-11-22 09:55:09,976 | INFO     | sum of deviations: 99946815332.5
[2025-11-22 03:55:42] 2025-11-22 09:55:09,976 | INFO     | mean x: 1763792466.5
[2025-11-22 03:55:42] 2025-11-22 09:55:09,976 | INFO     | mean y: 2326568.253768844
[2025-11-22 03:55:42] 2025-11-22 09:55:09,976 | INFO     | intersect: -9015285437.45828
[2025-11-22 03:55:42] 2025-11-22 09:55:09,976 | INFO     | chi2: 0.049154635034072545
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | current memory leak: 5.11 B/s (using 398 data points, chi2=0.05)
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | could have reported an average CPU frequency of 2494 MHz (18 samples)
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | ..............................
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | . Timing measurements:
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | . get job = 0 s
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | . initial setup = 3 s
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | . payload setup = 3 s
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | . stage-in = 0 s
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | . payload execution = 26158 s
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | . stage-out = 3 s
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | . log creation = 0 s
[2025-11-22 03:55:42] 2025-11-22 09:55:09,977 | INFO     | ..............................
[2025-11-22 03:55:42] 2025-11-22 09:55:10,012 | INFO     | 
[2025-11-22 03:55:42] 2025-11-22 09:55:10,012 | INFO     | job summary report
[2025-11-22 03:55:42] 2025-11-22 09:55:10,012 | INFO     | --------------------------------------------------
[2025-11-22 03:55:42] 2025-11-22 09:55:10,012 | INFO     | PanDA job id: 6894276339
[2025-11-22 03:55:42] 2025-11-22 09:55:10,012 | INFO     | task id: 47533967
[2025-11-22 03:55:42] 2025-11-22 09:55:10,012 | INFO     | errors: (none)
[2025-11-22 03:55:42] 2025-11-22 09:55:10,012 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 03:55:42] 2025-11-22 09:55:10,012 | INFO     | pilot state: finished 
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | transexitcode: 0
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | exeerrorcode: 0
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | exeerrordiag: 
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | exitcode: 0
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | exitmsg: OK
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | cpuconsumptiontime: 103724 s
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | nevents: 1000
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | neventsw: 0
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | pid: 922265
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | pgrp: 922265
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | corecount: 4
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | event service: False
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | sizes: {0: 2298804, 3: 2299066, 11: 2299094, 26165: 2336579, 26166: 2336578, 26169: 2345622, 26171: 2345806, 26179: 2346052}
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | --------------------------------------------------
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | 
[2025-11-22 03:55:42] 2025-11-22 09:55:10,013 | INFO     | executing command: ls -lF /data/boinc/slots/4
[2025-11-22 03:55:42] 2025-11-22 09:55:10,025 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | job 6894276339 has completed (purged errors)
[2025-11-22 03:55:42] 2025-11-22 09:55:10,026 | INFO     | overall cleanup function is called
[2025-11-22 03:55:42] 2025-11-22 09:55:11,035 | INFO     | --- collectZombieJob: --- 10, [922265]
[2025-11-22 03:55:42] 2025-11-22 09:55:11,035 | INFO     | zombie collector waiting for pid 922265
[2025-11-22 03:55:42] 2025-11-22 09:55:11,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 03:55:42] 2025-11-22 09:55:11,035 | INFO     | collected zombie processes
[2025-11-22 03:55:42] 2025-11-22 09:55:11,035 | INFO     | will attempt to kill all subprocesses of pid=922265
[2025-11-22 03:55:42] 2025-11-22 09:55:11,110 | INFO     | process IDs to be killed: [922265] (in reverse order)
[2025-11-22 03:55:42] 2025-11-22 09:55:11,141 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 03:55:42] 2025-11-22 09:55:11,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 03:55:42] 2025-11-22 09:55:11,144 | INFO     | did not find any defunct processes belonging to 922265
[2025-11-22 03:55:42] 2025-11-22 09:55:11,145 | INFO     | did not find any defunct processes belonging to 922265
[2025-11-22 03:55:42] 2025-11-22 09:55:11,146 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 03:55:42] 2025-11-22 09:55:11,146 | INFO     | ready for new job
[2025-11-22 03:55:42] 2025-11-22 09:55:11,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 03:55:42] 2025-11-22 09:55:11,147 | INFO     | ***************************************
[2025-11-22 03:55:42] 2025-11-22 09:55:11,147 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 03:55:42] 2025-11-22 09:55:11,147 | INFO     | ***************************************
[2025-11-22 03:55:42] 2025-11-22 09:55:11,147 | INFO     | 
[2025-11-22 03:55:42] 2025-11-22 09:55:11,148 | INFO     | pilot is running in a VM
[2025-11-22 03:55:42] 2025-11-22 09:55:11,148 | INFO     | architecture information:
[2025-11-22 03:55:42] 2025-11-22 09:55:11,148 | INFO     | executing command: cat /etc/os-release
[2025-11-22 03:55:42] 2025-11-22 09:55:11,156 | INFO     | cat /etc/os-release:
[2025-11-22 03:55:42] NAME="CentOS Linux"
[2025-11-22 03:55:42] VERSION="7 (Core)"
[2025-11-22 03:55:42] ID="centos"
[2025-11-22 03:55:42] ID_LIKE="rhel fedora"
[2025-11-22 03:55:42] VERSION_ID="7"
[2025-11-22 03:55:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 03:55:42] ANSI_COLOR="0;31"
[2025-11-22 03:55:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 03:55:42] HOME_URL="https://www.centos.org/"
[2025-11-22 03:55:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 03:55:42] 
[2025-11-22 03:55:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 03:55:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 03:55:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 03:55:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 03:55:42] 
[2025-11-22 03:55:42] 2025-11-22 09:55:11,156 | INFO     | ***************************************
[2025-11-22 03:55:42] 2025-11-22 09:55:11,659 | INFO     | executing command: df -mP /data/boinc/slots/4
[2025-11-22 03:55:42] 2025-11-22 09:55:11,669 | INFO     | sufficient remaining disk space (949844180992 B)
[2025-11-22 03:55:42] 2025-11-22 09:55:11,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 03:55:42] 2025-11-22 09:55:11,670 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 03:55:42] 2025-11-22 09:55:11,670 | INFO     | update_server=False
[2025-11-22 03:55:42] 2025-11-22 09:55:11,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 03:55:42] 2025-11-22 09:55:11,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:55:42] 2025-11-22 09:55:11,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 03:55:42] 2025-11-22 09:55:11,923 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 03:55:42] 2025-11-22 09:55:11,923 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 03:55:42] 2025-11-22 09:55:11,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 03:55:42] 2025-11-22 09:55:11,923 | INFO     | will abort loop
[2025-11-22 03:55:42] 2025-11-22 09:55:12,187 | INFO     | all data control threads have been joined
[2025-11-22 03:55:42] 2025-11-22 09:55:12,219 | INFO     | all payload control threads have been joined
[2025-11-22 03:55:42] 2025-11-22 09:55:12,456 | INFO     | [monitor] cgroup control has ended
[2025-11-22 03:55:42] 2025-11-22 09:55:12,675 | INFO     | [job] retrieve thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:12,675 | INFO     | [job] queue monitor thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:12,722 | INFO     | all job control threads have been joined
[2025-11-22 03:55:42] 2025-11-22 09:55:12,758 | INFO     | [payload] validate_post thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:12,810 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:12,928 | INFO     | [job] job monitor thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:12,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 03:55:42] 2025-11-22 09:55:13,192 | INFO     | [data] control thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:13,224 | INFO     | [payload] control thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:13,409 | INFO     | [data] copytool_in thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:13,676 | INFO     | [data] copytool_out thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:13,680 | INFO     | [job] validate thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:13,726 | INFO     | [job] control thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:13,827 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:13,909 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:13,947 | INFO     | [payload] failed_post thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:14,009 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:16,979 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 03:55:42] 2025-11-22 09:55:18,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129762675779392)>', '<ExcThread(monitor, started 129762135619328)>']
[2025-11-22 03:55:42] 2025-11-22 09:55:23,615 | INFO     | all workflow threads have been joined
[2025-11-22 03:55:42] 2025-11-22 09:55:23,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 03:55:42] 2025-11-22 09:55:23,615 | INFO     | traces error code: 0
[2025-11-22 03:55:42] 2025-11-22 09:55:23,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 03:55:42] 2025-11-22 09:55:42,176 | INFO     | PID=915492 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 03:55:42] 2025-11-22 09:55:42,176 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 03:55:42] 2025-11-22 09:55:42,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 03:55:42] 2025-11-22 09:55:42,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 03:55:42] 2025-11-22 09:55:42,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 03:55:42] 2025-11-22 09:55:42,176 | INFO     | [monitor] control thread has ended
[2025-11-22 03:55:42] 2025-11-22 09:55:42,237 [wrapper] ==== pilot stdout END ====
[2025-11-22 03:55:42] 2025-11-22 09:55:42,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 03:55:42] 2025-11-22 09:55:42,240 [wrapper] pilotpid: 915492
[2025-11-22 03:55:42] 2025-11-22 09:55:42,242 [wrapper] Pilot exit status: 0
[2025-11-22 03:55:42] 2025-11-22 09:55:42,248 [wrapper] pandaids: 6894276339
[2025-11-22 03:55:42] 2025-11-22 09:55:42,267 [wrapper] cleanup supervisor_pilot  991215 915493
[2025-11-22 03:55:42] 2025-11-22 09:55:42,269 [wrapper] Test setup, not cleaning
[2025-11-22 03:55:42] 2025-11-22 09:55:42,270 [wrapper] apfmon messages muted
[2025-11-22 03:55:42] 2025-11-22 09:55:42,272 [wrapper] ==== wrapper stdout END ====
[2025-11-22 03:55:42] 2025-11-22 09:55:42,274 [wrapper] ==== wrapper stderr END ====
[2025-11-22 03:55:42]  *** Error codes and diagnostics ***
[2025-11-22 03:55:42]     "exeErrorCode": 0,
[2025-11-22 03:55:42]     "exeErrorDiag": "",
[2025-11-22 03:55:42]     "pilotErrorCode": 0,
[2025-11-22 03:55:42]     "pilotErrorDiag": "",
[2025-11-22 03:55:42]  *** Listing of results directory ***
[2025-11-22 03:55:42] total 1313684
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc    576529 Nov 21 01:07 pilot3.tar.gz
[2025-11-22 03:55:42] -rwx------ 1 boinc boinc     36292 Nov 21 01:42 runpilot2-wrapper.sh
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc      5112 Nov 21 01:42 queuedata.json
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc       100 Nov 21 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 03:55:42] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 20:38 run_atlas
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc       105 Nov 21 20:38 job.xml
[2025-11-22 03:55:42] -rw-r--r-- 2 boinc boinc 409898802 Nov 21 20:38 EVNT.47493127._002313.pool.root.1
[2025-11-22 03:55:42] -rw-r--r-- 2 boinc boinc    590098 Nov 21 20:38 input.tar.gz
[2025-11-22 03:55:42] -rw-r--r-- 2 boinc boinc     15847 Nov 21 20:38 start_atlas.sh
[2025-11-22 03:55:42] drwxrwx--x 2 boinc boinc      4096 Nov 21 20:38 shared
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc         0 Nov 21 20:38 boinc_setup_complete
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc      6059 Nov 21 20:38 init_data.xml
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc         0 Nov 21 20:38 boinc_lockfile
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc      2786 Nov 21 20:38 pandaJob.out
[2025-11-22 03:55:42] -rw------- 1 boinc boinc    989776 Nov 21 20:38 agis_schedconf.cvmfs.json
[2025-11-22 03:55:42] drwx------ 5 boinc boinc      4096 Nov 21 20:38 pilot3
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc       532 Nov 22 03:51 boinc_task_state.xml
[2025-11-22 03:55:42] -rw------- 1 boinc boinc 921581857 Nov 22 03:54 HITS.47533967._002845.pool.root.1
[2025-11-22 03:55:42] -rw------- 1 boinc boinc        95 Nov 22 03:54 pilot_heartbeat.json
[2025-11-22 03:55:42] -rw------- 1 boinc boinc      1029 Nov 22 03:54 memory_monitor_summary.json
[2025-11-22 03:55:42] -rw------- 1 boinc boinc   1526164 Nov 22 03:55 agis_ddmendpoints.agis.ALL.json
[2025-11-22 03:55:42] -rw------- 1 boinc boinc   1258275 Nov 22 03:55 log.47533967._002845.job.log.tgz.1
[2025-11-22 03:55:42] -rw------- 1 boinc boinc      8571 Nov 22 03:55 heartbeat.json
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc      8192 Nov 22 03:55 boinc_mmap_file
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc        29 Nov 22 03:55 wrapper_checkpoint.txt
[2025-11-22 03:55:42] -rw------- 1 boinc boinc       746 Nov 22 03:55 pilotlog.txt
[2025-11-22 03:55:42] -rw------- 1 boinc boinc   3645625 Nov 22 03:55 log.47533967._002845.job.log.1
[2025-11-22 03:55:42] -rw------- 1 boinc boinc       353 Nov 22 03:55 output.list
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc       620 Nov 22 03:55 runtime_log
[2025-11-22 03:55:42] -rw------- 1 boinc boinc   4925440 Nov 22 03:55 result.tar.gz
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc      8720 Nov 22 03:55 runtime_log.err
[2025-11-22 03:55:42] -rw------- 1 boinc boinc       651 Nov 22 03:55 LkIODmVxag8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqRHKDmWxFEim.diag
[2025-11-22 03:55:42] -rw-r--r-- 1 boinc boinc     21398 Nov 22 03:55 stderr.txt
[2025-11-22 03:55:42] HITS file was successfully produced:
[2025-11-22 03:55:42] -rw------- 1 boinc boinc 921581857 Nov 22 03:54 shared/HITS.pool.root.1
[2025-11-22 03:55:42]  *** Contents of shared directory: ***
[2025-11-22 03:55:42] total 1305692
[2025-11-22 03:55:42] -rw-r--r-- 2 boinc boinc 409898802 Nov 21 20:38 ATLAS.root_0
[2025-11-22 03:55:42] -rw-r--r-- 2 boinc boinc    590098 Nov 21 20:38 input.tar.gz
[2025-11-22 03:55:42] -rw-r--r-- 2 boinc boinc     15847 Nov 21 20:38 start_atlas.sh
[2025-11-22 03:55:42] -rw------- 1 boinc boinc 921581857 Nov 22 03:54 HITS.pool.root.1
[2025-11-22 03:55:42] -rw------- 1 boinc boinc   4925440 Nov 22 03:55 result.tar.gz
03:55:44 (911031): run_atlas exited; CPU time 103873.290176
03:55:44 (911031): called boinc_finish(0)

</stderr_txt>
]]>

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