Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:39:33 (1538388): wrapper (7.7.26015): starting
20:39:33 (1538388): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 20:39:33] Arguments: --nthreads 9
[2025-11-21 20:39:33] Threads: 9
[2025-11-21 20:39:33] Checking for CVMFS
[2025-11-21 20:39:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 20:39:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 20:39:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 20:39:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 20:39:37] 2.13.2.0 6051 27998 219856 153154 2 470 29677433 40960000 13941 16776704 0 26914756 99.751 16001779 37757 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 20:39:37] CVMFS is ok
[2025-11-21 20:39:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 20:39:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 20:39:37] Further information can be found at the LHC@home message board.
[2025-11-21 20:39:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 20:39:37] Checking for apptainer binary...
[2025-11-21 20:39:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 20:39:37] Running /usr/bin/apptainer --version
[2025-11-21 20:39:37] apptainer version 1.4.4-1.el9
[2025-11-21 20:39:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 20:39:38] c-210-37-3.aglt2.org
[2025-11-21 20:39:38] apptainer works
[2025-11-21 20:39:38] Set ATHENA_PROC_NUMBER=9
[2025-11-21 20:39:38] Set ATHENA_CORE_NUMBER=9
[2025-11-21 20:39:38] Starting ATLAS job with PandaID=6894276349
[2025-11-21 20:39:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 11:21:06]  *** The last 200 lines of the pilot log: ***
[2025-11-23 11:21:06] 2025-11-23 16:20:08,234 | INFO     | PID=1543550 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 11:21:06] 2025-11-23 16:20:08,235 | INFO     | .. there are 12 such processes running
[2025-11-23 11:21:06] 2025-11-23 16:20:09,235 | INFO     | time since job start (139172s) is within the limit (172800.0s)
[2025-11-23 11:21:06] 2025-11-23 16:20:09,522 | INFO     | monitor loop #8314: job 0:6894276349 is in state 'finished'
[2025-11-23 11:21:06] 2025-11-23 16:20:09,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 11:21:06] 2025-11-23 16:20:11,247 | INFO     | time since job start (139174s) is within the limit (172800.0s)
[2025-11-23 11:21:06] 2025-11-23 16:20:12,065 | INFO     | monitor loop #8315: job 0:6894276349 is in state 'finished'
[2025-11-23 11:21:06] 2025-11-23 16:20:12,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 11:21:06] 2025-11-23 16:20:13,394 | INFO     | time since job start (139176s) is within the limit (172800.0s)
[2025-11-23 11:21:06] 2025-11-23 16:20:14,570 | INFO     | monitor loop #8316: job 0:6894276349 is in state 'finished'
[2025-11-23 11:21:06] 2025-11-23 16:20:14,570 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 11:21:06] 2025-11-23 16:20:15,414 | INFO     | time since job start (139178s) is within the limit (172800.0s)
[2025-11-23 11:21:06] 2025-11-23 16:20:17,113 | INFO     | monitor loop #8317: job 0:6894276349 is in state 'finished'
[2025-11-23 11:21:06] 2025-11-23 16:20:17,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 11:21:06] 2025-11-23 16:20:17,425 | INFO     | time since job start (139180s) is within the limit (172800.0s)
[2025-11-23 11:21:06] 2025-11-23 16:20:17,554 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 11:21:06] 2025-11-23 16:20:17,563 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2829.8393214285716
[2025-11-23 11:21:06] 2025-11-23 16:20:17,585 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894276349/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 11:21:06] 2025-11-23 16:20:17,586 | INFO     | extracted standard info from prmon json
[2025-11-23 11:21:06] 2025-11-23 16:20:17,586 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 11:21:06] 2025-11-23 16:20:17,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 11:21:06] 2025-11-23 16:20:17,657 | INFO     | fitting pss+swap vs Time
[2025-11-23 11:21:06] 2025-11-23 16:20:17,664 | INFO     | sum of square deviations: 3665609268476.826
[2025-11-23 11:21:06] 2025-11-23 16:20:17,878 | INFO     | sum of deviations: 13772811178499.77
[2025-11-23 11:21:06] 2025-11-23 16:20:17,879 | INFO     | mean x: 1763845254.4657595
[2025-11-23 11:21:06] 2025-11-23 16:20:17,879 | INFO     | mean y: 2993813.984196664
[2025-11-23 11:21:06] 2025-11-23 16:20:17,879 | INFO     | intersect: -6624310368.914795
[2025-11-23 11:21:06] 2025-11-23 16:20:17,887 | INFO     | chi2: 32.61158103257321
[2025-11-23 11:21:06] 2025-11-23 16:20:17,890 | INFO     | sum of square deviations: 3641529001835.768
[2025-11-23 11:21:06] 2025-11-23 16:20:18,092 | INFO     | sum of deviations: 14662021941909.855
[2025-11-23 11:21:06] 2025-11-23 16:20:18,092 | INFO     | mean x: 1763845101.976683
[2025-11-23 11:21:06] 2025-11-23 16:20:18,092 | INFO     | mean y: 2999444.3743950725
[2025-11-23 11:21:06] 2025-11-23 16:20:18,092 | INFO     | intersect: -7098834860.467069
[2025-11-23 11:21:06] 2025-11-23 16:20:18,099 | INFO     | chi2: 28.599889038435848
[2025-11-23 11:21:06] 2025-11-23 16:20:18,099 | INFO     | current chi2=28.599889038435848 (change=12.301433623013839 %)
[2025-11-23 11:21:06] 2025-11-23 16:20:18,099 | INFO     | right removable region: 2272
[2025-11-23 11:21:06] 2025-11-23 16:20:18,102 | INFO     | sum of square deviations: 3641522101515.764
[2025-11-23 11:21:06] 2025-11-23 16:20:18,346 | INFO     | sum of deviations: 12805686184372.764
[2025-11-23 11:21:06] 2025-11-23 16:20:18,346 | INFO     | mean x: 1763845406.976683
[2025-11-23 11:21:06] 2025-11-23 16:20:18,347 | INFO     | mean y: 2999936.9586449624
[2025-11-23 11:21:06] 2025-11-23 16:20:18,347 | INFO     | intersect: -6199695015.816417
[2025-11-23 11:21:06] 2025-11-23 16:20:18,353 | INFO     | chi2: 28.347605601649512
[2025-11-23 11:21:06] 2025-11-23 16:20:18,353 | INFO     | current chi2=28.347605601649512 (change=13.07503437709672 %)
[2025-11-23 11:21:06] 2025-11-23 16:20:18,354 | INFO     | left removable region: 10
[2025-11-23 11:21:06] 2025-11-23 16:20:18,356 | INFO     | sum of square deviations: 3588910431787.5
[2025-11-23 11:21:06] 2025-11-23 16:20:18,654 | INFO     | sum of deviations: 12978507288625.98
[2025-11-23 11:21:06] 2025-11-23 16:20:18,654 | INFO     | mean x: 1763845376.500884
[2025-11-23 11:21:06] 2025-11-23 16:20:18,655 | INFO     | mean y: 3012091.7634836426
[2025-11-23 11:21:06] 2025-11-23 16:20:18,655 | INFO     | intersect: -6375547783.168888
[2025-11-23 11:21:06] 2025-11-23 16:20:18,661 | INFO     | chi2: 20.401277352486204
[2025-11-23 11:21:06] 2025-11-23 16:20:18,662 | INFO     | current memory leak: 3.62 B/s (using 2262 data points, chi2=20.40)
[2025-11-23 11:21:06] 2025-11-23 16:20:18,664 | INFO     | could have reported an average CPU frequency of 2829 MHz (79 samples)
[2025-11-23 11:21:06] 2025-11-23 16:20:18,664 | INFO     | ..............................
[2025-11-23 11:21:06] 2025-11-23 16:20:18,664 | INFO     | . Timing measurements:
[2025-11-23 11:21:06] 2025-11-23 16:20:18,664 | INFO     | . get job = 0 s
[2025-11-23 11:21:06] 2025-11-23 16:20:18,664 | INFO     | . initial setup = 4 s
[2025-11-23 11:21:06] 2025-11-23 16:20:18,665 | INFO     | . payload setup = 50 s
[2025-11-23 11:21:06] 2025-11-23 16:20:18,665 | INFO     | . stage-in = 0 s
[2025-11-23 11:21:06] 2025-11-23 16:20:18,665 | INFO     | . payload execution = 138991 s
[2025-11-23 11:21:06] 2025-11-23 16:20:18,665 | INFO     | . stage-out = 12 s
[2025-11-23 11:21:06] 2025-11-23 16:20:18,673 | INFO     | . log creation = 5 s
[2025-11-23 11:21:06] 2025-11-23 16:20:18,673 | INFO     | ..............................
[2025-11-23 11:21:06] 2025-11-23 16:20:19,197 | INFO     | 
[2025-11-23 11:21:06] 2025-11-23 16:20:19,197 | INFO     | job summary report
[2025-11-23 11:21:06] 2025-11-23 16:20:19,204 | INFO     | --------------------------------------------------
[2025-11-23 11:21:06] 2025-11-23 16:20:19,204 | INFO     | PanDA job id: 6894276349
[2025-11-23 11:21:06] 2025-11-23 16:20:19,204 | INFO     | task id: 47533967
[2025-11-23 11:21:06] 2025-11-23 16:20:19,204 | INFO     | errors: (none)
[2025-11-23 11:21:06] 2025-11-23 16:20:19,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 11:21:06] 2025-11-23 16:20:19,204 | INFO     | pilot state: finished 
[2025-11-23 11:21:06] 2025-11-23 16:20:19,204 | INFO     | transexitcode: 0
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | exeerrorcode: 0
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | exeerrordiag: 
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | exitcode: 0
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | exitmsg: OK
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | cpuconsumptiontime: 249693 s
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | nevents: 1000
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | neventsw: 0
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | pid: 1551572
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | pgrp: 1551572
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | corecount: 9
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | event service: False
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | sizes: {0: 2298636, 1: 2298835, 2: 2298835, 13: 2298863, 24: 2298919, 36: 2299365, 47: 2299365, 139046: 2388337, 139047: 2388336, 139060: 2397386, 139063: 2397442,
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | --------------------------------------------------
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | 
[2025-11-23 11:21:06] 2025-11-23 16:20:19,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 11:21:06] 2025-11-23 16:20:19,369 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,370 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,371 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,371 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 11:21:06] 2025-11-23 16:20:19,371 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,371 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 11:21:06] 2025-11-23 16:20:19,371 | INFO     | job 6894276349 has completed (purged errors)
[2025-11-23 11:21:06] 2025-11-23 16:20:19,371 | INFO     | overall cleanup function is called
[2025-11-23 11:21:06] 2025-11-23 16:20:20,495 | INFO     | --- collectZombieJob: --- 10, [1551572]
[2025-11-23 11:21:06] 2025-11-23 16:20:20,495 | INFO     | zombie collector waiting for pid 1551572
[2025-11-23 11:21:06] 2025-11-23 16:20:20,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 11:21:06] 2025-11-23 16:20:20,495 | INFO     | collected zombie processes
[2025-11-23 11:21:06] 2025-11-23 16:20:20,496 | INFO     | will attempt to kill all subprocesses of pid=1551572
[2025-11-23 11:21:06] 2025-11-23 16:20:23,053 | INFO     | process IDs to be killed: [1551572] (in reverse order)
[2025-11-23 11:21:06] 2025-11-23 16:20:23,634 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 11:21:06] 2025-11-23 16:20:23,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 11:21:06] 2025-11-23 16:20:23,688 | INFO     | did not find any defunct processes belonging to 1551572
[2025-11-23 11:21:06] 2025-11-23 16:20:23,727 | INFO     | did not find any defunct processes belonging to 1551572
[2025-11-23 11:21:06] 2025-11-23 16:20:23,748 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 11:21:06] 2025-11-23 16:20:23,749 | INFO     | ready for new job
[2025-11-23 11:21:06] 2025-11-23 16:20:23,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 11:21:06] 2025-11-23 16:20:23,792 | INFO     | ***************************************
[2025-11-23 11:21:06] 2025-11-23 16:20:23,792 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 11:21:06] 2025-11-23 16:20:23,792 | INFO     | ***************************************
[2025-11-23 11:21:06] 2025-11-23 16:20:23,792 | INFO     | 
[2025-11-23 11:21:06] 2025-11-23 16:20:23,809 | INFO     | architecture information:
[2025-11-23 11:21:06] 2025-11-23 16:20:23,813 | INFO     | executing command: cat /etc/os-release
[2025-11-23 11:21:06] 2025-11-23 16:20:23,894 | INFO     | cat /etc/os-release:
[2025-11-23 11:21:06] NAME="CentOS Linux"
[2025-11-23 11:21:06] VERSION="7 (Core)"
[2025-11-23 11:21:06] ID="centos"
[2025-11-23 11:21:06] ID_LIKE="rhel fedora"
[2025-11-23 11:21:06] VERSION_ID="7"
[2025-11-23 11:21:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 11:21:06] ANSI_COLOR="0;31"
[2025-11-23 11:21:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 11:21:06] HOME_URL="https://www.centos.org/"
[2025-11-23 11:21:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 11:21:06] 
[2025-11-23 11:21:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 11:21:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 11:21:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 11:21:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 11:21:06] 
[2025-11-23 11:21:06] 2025-11-23 16:20:23,895 | INFO     | ***************************************
[2025-11-23 11:21:06] 2025-11-23 16:20:24,397 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 11:21:06] 2025-11-23 16:20:24,489 | INFO     | sufficient remaining disk space (68986863616 B)
[2025-11-23 11:21:06] 2025-11-23 16:20:24,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 11:21:06] 2025-11-23 16:20:24,490 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 11:21:06] 2025-11-23 16:20:24,490 | INFO     | update_server=False
[2025-11-23 11:21:06] 2025-11-23 16:20:24,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 11:21:06] 2025-11-23 16:20:24,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 11:21:06] 2025-11-23 16:20:24,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:21:06] 2025-11-23 16:20:24,710 | INFO     | all data control threads have been joined
[2025-11-23 11:21:06] 2025-11-23 16:20:24,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 11:21:06] 2025-11-23 16:20:24,969 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 11:21:06] 2025-11-23 16:20:24,969 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 11:21:06] 2025-11-23 16:20:24,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:21:06] 2025-11-23 16:20:24,969 | INFO     | will abort loop
[2025-11-23 11:21:06] 2025-11-23 16:20:25,238 | INFO     | all job control threads have been joined
[2025-11-23 11:21:06] 2025-11-23 16:20:25,339 | INFO     | all payload control threads have been joined
[2025-11-23 11:21:06] 2025-11-23 16:20:25,498 | INFO     | [job] queue monitor thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:25,535 | INFO     | [job] retrieve thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:25,715 | INFO     | [data] control thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:25,970 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:25,975 | INFO     | [job] job monitor thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,244 | INFO     | [job] control thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,345 | INFO     | [payload] control thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,351 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,500 | INFO     | [data] copytool_out thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,693 | INFO     | [data] copytool_in thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,702 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,708 | INFO     | [job] validate thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,797 | INFO     | [payload] failed_post thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:26,896 | INFO     | [payload] validate_post thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:28,754 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 11:21:06] 2025-11-23 16:20:55,901 | INFO     | [monitor] cgroup control has ended
[2025-11-23 11:21:06] 2025-11-23 16:20:56,133 | INFO     | PID=1543550 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 11:21:06] 2025-11-23 16:20:56,133 | INFO     | .. there are 12 such processes running
[2025-11-23 11:21:06] 2025-11-23 16:20:56,133 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 11:21:06] 2025-11-23 16:20:56,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 11:21:06] 2025-11-23 16:20:56,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 11:21:06] 2025-11-23 16:20:57,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438690142016)>', '<ExcThread(monitor, started 140437973100288)>']
[2025-11-23 11:21:06] 2025-11-23 16:20:57,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 11:21:06] 2025-11-23 16:20:57,139 | INFO     | [monitor] control thread has ended
[2025-11-23 11:21:06] 2025-11-23 16:21:02,025 | INFO     | all workflow threads have been joined
[2025-11-23 11:21:06] 2025-11-23 16:21:02,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 11:21:06] 2025-11-23 16:21:02,026 | INFO     | traces error code: 0
[2025-11-23 11:21:06] 2025-11-23 16:21:02,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 11:21:06] 2025-11-23 16:21:05,189 [wrapper] ==== pilot stdout END ====
[2025-11-23 11:21:06] 2025-11-23 16:21:05,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 11:21:06] 2025-11-23 16:21:05,250 [wrapper] pilotpid: 1543550
[2025-11-23 11:21:06] 2025-11-23 16:21:05,285 [wrapper] Pilot exit status: 0
[2025-11-23 11:21:06] 2025-11-23 16:21:05,449 [wrapper] pandaids: 6894276349
[2025-11-23 11:21:06] 2025-11-23 16:21:05,852 [wrapper] cleanup supervisor_pilot  770416 1543551
[2025-11-23 11:21:06] 2025-11-23 16:21:05,869 [wrapper] Test setup, not cleaning
[2025-11-23 11:21:06] 2025-11-23 16:21:05,884 [wrapper] apfmon messages muted
[2025-11-23 11:21:06] 2025-11-23 16:21:05,900 [wrapper] ==== wrapper stdout END ====
[2025-11-23 11:21:06] 2025-11-23 16:21:05,935 [wrapper] ==== wrapper stderr END ====
[2025-11-23 11:21:06]  *** Error codes and diagnostics ***
[2025-11-23 11:21:06]     "exeErrorCode": 0,
[2025-11-23 11:21:06]     "exeErrorDiag": "",
[2025-11-23 11:21:06]     "pilotErrorCode": 0,
[2025-11-23 11:21:06]     "pilotErrorDiag": "",
[2025-11-23 11:21:06]  *** Listing of results directory ***
[2025-11-23 11:21:06] total 1345676
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 02:44 queuedata.json
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 02:44 pilot3.tar.gz
[2025-11-23 11:21:06] -rwx------. 1 boincer umatlas     36292 Nov 21 02:45 runpilot2-wrapper.sh
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas       100 Nov 21 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 11:21:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 20:39 run_atlas
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas       105 Nov 21 20:39 job.xml
[2025-11-23 11:21:06] -rw-r--r--. 2 boincer umatlas 411757236 Nov 21 20:39 EVNT.47493127._002314.pool.root.1
[2025-11-23 11:21:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 20:39 start_atlas.sh
[2025-11-23 11:21:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 20:39 shared
[2025-11-23 11:21:06] -rw-r--r--. 2 boincer umatlas    590105 Nov 21 20:39 input.tar.gz
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas         0 Nov 21 20:39 boinc_lockfile
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 20:39 pandaJob.out
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas        57 Nov 21 20:39 setup.sh.local
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas    989798 Nov 21 20:40 agis_schedconf.cvmfs.json
[2025-11-23 11:21:06] drwx------. 5 boincer umatlas      4096 Nov 21 20:40 pilot3
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas       533 Nov 23 10:31 boinc_task_state.xml
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas      6844 Nov 23 11:12 init_data.xml
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas 920839411 Nov 23 11:15 HITS.47533967._002855.pool.root.1
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas      1061 Nov 23 11:19 memory_monitor_summary.json
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas   1526164 Nov 23 11:19 agis_ddmendpoints.agis.ALL.json
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas   3192412 Nov 23 11:19 log.47533967._002855.job.log.tgz.1
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas        95 Nov 23 11:20 pilot_heartbeat.json
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas      8629 Nov 23 11:20 heartbeat.json
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas      5010 Nov 23 11:21 pilotlog.txt
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 11:21 boinc_mmap_file
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas        29 Nov 23 11:21 wrapper_checkpoint.txt
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas  17529466 Nov 23 11:21 log.47533967._002855.job.log.1
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas       353 Nov 23 11:21 output.list
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas       620 Nov 23 11:21 runtime_log
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas  20746240 Nov 23 11:21 result.tar.gz
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas      9354 Nov 23 11:21 runtime_log.err
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas       665 Nov 23 11:21 gzxLDme0ag8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2RHKDmsvQ0Bo.diag
[2025-11-23 11:21:06] -rw-r--r--. 1 boincer umatlas     21873 Nov 23 11:21 stderr.txt
[2025-11-23 11:21:06] HITS file was successfully produced:
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas 920839411 Nov 23 11:15 shared/HITS.pool.root.1
[2025-11-23 11:21:06]  *** Contents of shared directory: ***
[2025-11-23 11:21:06] total 1322232
[2025-11-23 11:21:06] -rw-r--r--. 2 boincer umatlas 411757236 Nov 21 20:39 ATLAS.root_0
[2025-11-23 11:21:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 20:39 start_atlas.sh
[2025-11-23 11:21:06] -rw-r--r--. 2 boincer umatlas    590105 Nov 21 20:39 input.tar.gz
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas 920839411 Nov 23 11:15 HITS.pool.root.1
[2025-11-23 11:21:06] -rw-------. 1 boincer umatlas  20746240 Nov 23 11:21 result.tar.gz
11:21:29 (1538388): run_atlas exited; CPU time 251300.207987
11:21:29 (1538388): called boinc_finish(0)

</stderr_txt>
]]>

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