Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:24:21 (1583778): wrapper (7.7.26015): starting
15:24:21 (1583778): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 15:24:21] Arguments: --nthreads 3
[2025-11-27 15:24:21] Threads: 3
[2025-11-27 15:24:21] Checking for CVMFS
[2025-11-27 15:24:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 15:24:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 15:24:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 15:24:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 15:24:21] 2.9.2.0 3963118 12755 85304 153368 3 81 9886137 36864001 0 130560 0 4732162 99.879 730959 5468 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 15:24:21] CVMFS is ok
[2025-11-27 15:24:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 15:24:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 15:24:21] Further information can be found at the LHC@home message board.
[2025-11-27 15:24:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 15:24:21] Checking for apptainer binary...
[2025-11-27 15:24:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 15:24:21] Running /usr/bin/apptainer --version
[2025-11-27 15:24:21] apptainer version 1.4.1-1.1
[2025-11-27 15:24:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 15:24:21] thA312
[2025-11-27 15:24:21] apptainer works
[2025-11-27 15:24:21] Set ATHENA_PROC_NUMBER=3
[2025-11-27 15:24:21] Set ATHENA_CORE_NUMBER=3
[2025-11-27 15:24:21] Starting ATLAS job with PandaID=6894274417
[2025-11-27 15:24:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:32:14]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:32:14] 2025-11-27 22:31:43,128 | INFO     | did not find any defunct processes belonging to 1593950
[2025-11-27 23:32:14] 2025-11-27 22:31:43,129 | INFO     | did not find any defunct processes belonging to 1593950
[2025-11-27 23:32:14] 2025-11-27 22:31:43,130 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:32:14] 2025-11-27 22:31:43,130 | INFO     | ready for new job
[2025-11-27 23:32:14] 2025-11-27 22:31:43,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:32:14] 2025-11-27 22:31:43,131 | INFO     | ***************************************
[2025-11-27 23:32:14] 2025-11-27 22:31:43,131 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:32:14] 2025-11-27 22:31:43,131 | INFO     | ***************************************
[2025-11-27 23:32:14] 2025-11-27 22:31:43,131 | INFO     | 
[2025-11-27 23:32:14] 2025-11-27 22:31:43,131 | INFO     | architecture information:
[2025-11-27 23:32:14] 2025-11-27 22:31:43,132 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:32:14] 2025-11-27 22:31:43,141 | INFO     | cat /etc/os-release:
[2025-11-27 23:32:14] NAME="CentOS Linux"
[2025-11-27 23:32:14] VERSION="7 (Core)"
[2025-11-27 23:32:14] ID="centos"
[2025-11-27 23:32:14] ID_LIKE="rhel fedora"
[2025-11-27 23:32:14] VERSION_ID="7"
[2025-11-27 23:32:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:32:14] ANSI_COLOR="0;31"
[2025-11-27 23:32:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:32:14] HOME_URL="https://www.centos.org/"
[2025-11-27 23:32:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:32:14] 
[2025-11-27 23:32:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:32:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:32:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:32:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:32:14] 
[2025-11-27 23:32:14] 2025-11-27 22:31:43,141 | INFO     | ***************************************
[2025-11-27 23:32:14] 2025-11-27 22:31:43,644 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 23:32:14] 2025-11-27 22:31:43,658 | INFO     | sufficient remaining disk space (344414224384 B)
[2025-11-27 23:32:14] 2025-11-27 22:31:43,658 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:32:14] 2025-11-27 22:31:43,658 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:32:14] 2025-11-27 22:31:43,658 | INFO     | update_server=False
[2025-11-27 23:32:14] 2025-11-27 22:31:43,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:32:14] 2025-11-27 22:31:43,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:32:14] 2025-11-27 22:31:43,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:32:14] 2025-11-27 22:31:43,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:32:14] 2025-11-27 22:31:43,918 | INFO     | all data control threads have been joined
[2025-11-27 23:32:14] 2025-11-27 22:31:44,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:32:14] 2025-11-27 22:31:44,017 | INFO     | aborting loop
[2025-11-27 23:32:14] 2025-11-27 22:31:44,238 | INFO     | all job control threads have been joined
[2025-11-27 23:32:14] 2025-11-27 22:31:44,664 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:44,664 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:44,724 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:44,735 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:44,851 | INFO     | all payload control threads have been joined
[2025-11-27 23:32:14] 2025-11-27 22:31:44,881 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:44,924 | INFO     | [data] control thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:45,022 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:45,178 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:45,180 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:45,244 | INFO     | [job] control thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:45,271 | INFO     | [job] validate thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:45,618 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:45,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:45,665 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:45,856 | INFO     | [payload] control thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:31:47,665 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:32:14] 2025-11-27 22:32:02,901 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:32:14] 2025-11-27 22:32:04,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441408264000)>', '<ExcThread(monitor, started 140440917497600)>']
[2025-11-27 23:32:14] 2025-11-27 22:32:09,561 | INFO     | all workflow threads have been joined
[2025-11-27 23:32:14] 2025-11-27 22:32:09,561 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:32:14] 2025-11-27 22:32:09,562 | INFO     | traces error code: 0
[2025-11-27 23:32:14] 2025-11-27 22:32:09,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:32:14] 2025-11-27 22:32:14,535 | INFO     | PID=1587499 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 23:32:14] 2025-11-27 22:32:14,536 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:32:14] 2025-11-27 22:32:14,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:32:14] 2025-11-27 22:32:14,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:32:14] 2025-11-27 22:32:14,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:32:14] 2025-11-27 22:32:14,536 | INFO     | [monitor] control thread has ended
[2025-11-27 23:32:14] 2025-11-27 22:32:14,583 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:32:14] 2025-11-27 22:32:14,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:32:14] 2025-11-27 22:32:14,588 [wrapper] pilotpid: 1587499
[2025-11-27 23:32:14] 2025-11-27 22:32:14,590 [wrapper] Pilot exit status: 0
[2025-11-27 23:32:14] 2025-11-27 22:32:14,597 [wrapper] pandaids: 6894274417
[2025-11-27 23:32:14] 2025-11-27 22:32:14,614 [wrapper] cleanup supervisor_pilot 1648299 1587500
[2025-11-27 23:32:14] 2025-11-27 22:32:14,617 [wrapper] Test setup, not cleaning
[2025-11-27 23:32:14] 2025-11-27 22:32:14,619 [wrapper] apfmon messages muted
[2025-11-27 23:32:14] 2025-11-27 22:32:14,621 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:32:14] 2025-11-27 22:32:14,623 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:32:14]  *** Error codes and diagnostics ***
[2025-11-27 23:32:14]     "exeErrorCode": 0,
[2025-11-27 23:32:14]     "exeErrorDiag": "",
[2025-11-27 23:32:14]     "pilotErrorCode": 0,
[2025-11-27 23:32:14]     "pilotErrorDiag": "",
[2025-11-27 23:32:14]  *** Listing of results directory ***
[2025-11-27 23:32:14] total 1308560
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc    576529 Nov 21 08:07 pilot3.tar.gz
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc      5112 Nov 21 08:27 queuedata.json
[2025-11-27 23:32:14] -rwx------ 1 boinc boinc     36292 Nov 21 08:30 runpilot2-wrapper.sh
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc       100 Nov 27 15:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:32:14] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 15:24 run_atlas
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc       105 Nov 27 15:24 job.xml
[2025-11-27 23:32:14] -rw-r--r-- 2 boinc boinc 408158204 Nov 27 15:24 EVNT.47493127._002304.pool.root.1
[2025-11-27 23:32:14] drwxrwx--x 2 boinc boinc      4096 Nov 27 15:24 shared
[2025-11-27 23:32:14] -rw-r--r-- 2 boinc boinc    590104 Nov 27 15:24 input.tar.gz
[2025-11-27 23:32:14] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:24 start_atlas.sh
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc         0 Nov 27 15:24 boinc_setup_complete
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc      6440 Nov 27 15:24 init_data.xml
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc         0 Nov 27 15:24 boinc_lockfile
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc      2786 Nov 27 15:24 pandaJob.out
[2025-11-27 23:32:14] -rw------- 1 boinc boinc    991580 Nov 27 15:24 agis_schedconf.cvmfs.json
[2025-11-27 23:32:14] drwx------ 5 boinc boinc      4096 Nov 27 15:24 pilot3
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc       531 Nov 27 23:28 boinc_task_state.xml
[2025-11-27 23:32:14] -rw------- 1 boinc boinc 917339130 Nov 27 23:31 HITS.47533967._002755.pool.root.1
[2025-11-27 23:32:14] -rw------- 1 boinc boinc      1024 Nov 27 23:31 memory_monitor_summary.json
[2025-11-27 23:32:14] -rw------- 1 boinc boinc   1516240 Nov 27 23:31 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:32:14] -rw------- 1 boinc boinc   1169849 Nov 27 23:31 log.47533967._002755.job.log.tgz.1
[2025-11-27 23:32:14] -rw------- 1 boinc boinc      8565 Nov 27 23:31 heartbeat.json
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc      8192 Nov 27 23:31 boinc_mmap_file
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc        28 Nov 27 23:31 wrapper_checkpoint.txt
[2025-11-27 23:32:14] -rw------- 1 boinc boinc       747 Nov 27 23:32 pilotlog.txt
[2025-11-27 23:32:14] -rw------- 1 boinc boinc        95 Nov 27 23:32 pilot_heartbeat.json
[2025-11-27 23:32:14] -rw------- 1 boinc boinc   4113124 Nov 27 23:32 log.47533967._002755.job.log.1
[2025-11-27 23:32:14] -rw------- 1 boinc boinc       353 Nov 27 23:32 output.list
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc       620 Nov 27 23:32 runtime_log
[2025-11-27 23:32:14] -rw------- 1 boinc boinc   5304320 Nov 27 23:32 result.tar.gz
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc      8898 Nov 27 23:32 runtime_log.err
[2025-11-27 23:32:14] -rw------- 1 boinc boinc       665 Nov 27 23:32 dKOLDmJmag8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1QHKDmn2v8bn.diag
[2025-11-27 23:32:14] -rw-r--r-- 1 boinc boinc      9979 Nov 27 23:32 stderr.txt
[2025-11-27 23:32:14] HITS file was successfully produced:
[2025-11-27 23:32:14] -rw------- 1 boinc boinc 917339130 Nov 27 23:31 shared/HITS.pool.root.1
[2025-11-27 23:32:14]  *** Contents of shared directory: ***
[2025-11-27 23:32:14] total 1300216
[2025-11-27 23:32:14] -rw-r--r-- 2 boinc boinc 408158204 Nov 27 15:24 ATLAS.root_0
[2025-11-27 23:32:14] -rw-r--r-- 2 boinc boinc    590104 Nov 27 15:24 input.tar.gz
[2025-11-27 23:32:14] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:24 start_atlas.sh
[2025-11-27 23:32:14] -rw------- 1 boinc boinc 917339130 Nov 27 23:31 HITS.pool.root.1
[2025-11-27 23:32:14] -rw------- 1 boinc boinc   5304320 Nov 27 23:32 result.tar.gz
23:32:15 (1583778): run_atlas exited; CPU time 86406.733882
23:32:15 (1583778): called boinc_finish(0)

</stderr_txt>
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