Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:52:19 (21508): wrapper (7.7.26015): starting
00:52:19 (21508): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 00:52:19] Arguments: --nthreads 8
[2025-11-22 00:52:19] Threads: 8
[2025-11-22 00:52:19] Checking for CVMFS
[2025-11-22 00:52:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:52:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:52:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:52:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:52:19] 2.11.2.0 2873 54243 86932 153161 1 82 20026365 20275200 1 130560 0 13157027 99.853 2883980 29222 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 00:52:19] CVMFS is ok
[2025-11-22 00:52:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 00:52:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 00:52:19] Further information can be found at the LHC@home message board.
[2025-11-22 00:52:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:52:19] Checking for apptainer binary...
[2025-11-22 00:52:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:52:19] Running /usr/bin/apptainer --version
[2025-11-22 00:52:19] apptainer version 1.3.2-1.el7
[2025-11-22 00:52:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:52:21] c-115-13.aglt2.org
[2025-11-22 00:52:21] apptainer works
[2025-11-22 00:52:21] Set ATHENA_PROC_NUMBER=8
[2025-11-22 00:52:21] Set ATHENA_CORE_NUMBER=8
[2025-11-22 00:52:21] Starting ATLAS job with PandaID=6894275553
[2025-11-22 00:52:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 12:18:52]  *** The last 200 lines of the pilot log: ***
[2025-11-22 12:18:52] 2025-11-22 17:17:44,162 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 12:18:52] 2025-11-22 17:17:44,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 12:18:52] 2025-11-22 17:17:44,174 | INFO     | fitting pss+swap vs Time
[2025-11-22 12:18:52] 2025-11-22 17:17:44,175 | INFO     | sum of square deviations: 94941811184.65836
[2025-11-22 12:18:52] 2025-11-22 17:17:44,184 | INFO     | sum of deviations: 619872221108.4694
[2025-11-22 12:18:52] 2025-11-22 17:17:44,185 | INFO     | mean x: 1763811316.0890207
[2025-11-22 12:18:52] 2025-11-22 17:17:44,185 | INFO     | mean y: 3210795.725519288
[2025-11-22 12:18:52] 2025-11-22 17:17:44,185 | INFO     | intersect: -11512660078.002094
[2025-11-22 12:18:52] 2025-11-22 17:17:44,186 | INFO     | chi2: 6.665966698485182
[2025-11-22 12:18:52] 2025-11-22 17:17:44,187 | INFO     | sum of square deviations: 92844618525.41122
[2025-11-22 12:18:52] 2025-11-22 17:17:44,196 | INFO     | sum of deviations: 872525824318.4431
[2025-11-22 12:18:52] 2025-11-22 17:17:44,196 | INFO     | mean x: 1763811163.5934231
[2025-11-22 12:18:52] 2025-11-22 17:17:44,197 | INFO     | mean y: 3229155.4648729446
[2025-11-22 12:18:52] 2025-11-22 17:17:44,197 | INFO     | intersect: -16572538119.998844
[2025-11-22 12:18:52] 2025-11-22 17:17:44,197 | INFO     | chi2: 3.4223042432627695
[2025-11-22 12:18:52] 2025-11-22 17:17:44,198 | INFO     | current chi2=3.4223042432627695 (change=48.660045900912216 %)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,198 | INFO     | sum of square deviations: 90778542728.63704
[2025-11-22 12:18:52] 2025-11-22 17:17:44,207 | INFO     | sum of deviations: 1004558352674.8995
[2025-11-22 12:18:52] 2025-11-22 17:17:44,207 | INFO     | mean x: 1763811011.0978916
[2025-11-22 12:18:52] 2025-11-22 17:17:44,207 | INFO     | mean y: 3238895.5707831327
[2025-11-22 12:18:52] 2025-11-22 17:17:44,207 | INFO     | intersect: -19515152020.164837
[2025-11-22 12:18:52] 2025-11-22 17:17:44,208 | INFO     | chi2: 2.4548985494795232
[2025-11-22 12:18:52] 2025-11-22 17:17:44,208 | INFO     | current chi2=2.4548985494795232 (change=28.26767069841042 %)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,209 | INFO     | sum of square deviations: 88743270590.23988
[2025-11-22 12:18:52] 2025-11-22 17:17:44,217 | INFO     | sum of deviations: 1012431245957.9379
[2025-11-22 12:18:52] 2025-11-22 17:17:44,218 | INFO     | mean x: 1763810858.5993931
[2025-11-22 12:18:52] 2025-11-22 17:17:44,218 | INFO     | mean y: 3239476.344461305
[2025-11-22 12:18:52] 2025-11-22 17:17:44,218 | INFO     | intersect: -20119269118.716515
[2025-11-22 12:18:52] 2025-11-22 17:17:44,218 | INFO     | chi2: 2.3703924205093725
[2025-11-22 12:18:52] 2025-11-22 17:17:44,219 | INFO     | current chi2=2.3703924205093725 (change=3.4423470977270068 %)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,219 | INFO     | right removable region: 658
[2025-11-22 12:18:52] 2025-11-22 17:17:44,219 | INFO     | sum of square deviations: 92844376355.41116
[2025-11-22 12:18:52] 2025-11-22 17:17:44,228 | INFO     | sum of deviations: 418011432667.17786
[2025-11-22 12:18:52] 2025-11-22 17:17:44,229 | INFO     | mean x: 1763811468.5934231
[2025-11-22 12:18:52] 2025-11-22 17:17:44,229 | INFO     | mean y: 3225443.813153961
[2025-11-22 12:18:52] 2025-11-22 17:17:44,229 | INFO     | intersect: -7937948678.776176
[2025-11-22 12:18:52] 2025-11-22 17:17:44,229 | INFO     | chi2: 4.455836579802955
[2025-11-22 12:18:52] 2025-11-22 17:17:44,230 | INFO     | current chi2=4.455836579802955 (change=33.15543294244886 %)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,230 | INFO     | sum of square deviations: 90778058388.637
[2025-11-22 12:18:52] 2025-11-22 17:17:44,242 | INFO     | sum of deviations: 375761814655.37787
[2025-11-22 12:18:52] 2025-11-22 17:17:44,242 | INFO     | mean x: 1763811621.0978916
[2025-11-22 12:18:52] 2025-11-22 17:17:44,242 | INFO     | mean y: 3228559.8403614457
[2025-11-22 12:18:52] 2025-11-22 17:17:44,242 | INFO     | intersect: -7297798441.82273
[2025-11-22 12:18:52] 2025-11-22 17:17:44,243 | INFO     | chi2: 4.411400975035466
[2025-11-22 12:18:52] 2025-11-22 17:17:44,243 | INFO     | current chi2=4.411400975035466 (change=0.9972449386699356 %)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,243 | INFO     | left removable region: 20
[2025-11-22 12:18:52] 2025-11-22 17:17:44,244 | INFO     | sum of square deviations: 80526823764.75217
[2025-11-22 12:18:52] 2025-11-22 17:17:44,252 | INFO     | sum of deviations: 723412017189.1185
[2025-11-22 12:18:52] 2025-11-22 17:17:44,252 | INFO     | mean x: 1763811438.106583
[2025-11-22 12:18:52] 2025-11-22 17:17:44,252 | INFO     | mean y: 3261229.73354232
[2025-11-22 12:18:52] 2025-11-22 17:17:44,252 | INFO     | intersect: -15841923402.277636
[2025-11-22 12:18:52] 2025-11-22 17:17:44,253 | INFO     | chi2: 0.08242802213736361
[2025-11-22 12:18:52] 2025-11-22 17:17:44,253 | INFO     | current memory leak: 8.98 B/s (using 638 data points, chi2=0.08)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,253 | INFO     | could have reported an average CPU frequency of 2401 MHz (26 samples)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,254 | INFO     | ..............................
[2025-11-22 12:18:52] 2025-11-22 17:17:44,254 | INFO     | . Timing measurements:
[2025-11-22 12:18:52] 2025-11-22 17:17:44,254 | INFO     | . get job = 0 s
[2025-11-22 12:18:52] 2025-11-22 17:17:44,254 | INFO     | . initial setup = 2 s
[2025-11-22 12:18:52] 2025-11-22 17:17:44,254 | INFO     | . payload setup = 8 s
[2025-11-22 12:18:52] 2025-11-22 17:17:44,254 | INFO     | . stage-in = 0 s
[2025-11-22 12:18:52] 2025-11-22 17:17:44,254 | INFO     | . payload execution = 41066 s
[2025-11-22 12:18:52] 2025-11-22 17:17:44,254 | INFO     | . stage-out = 3 s
[2025-11-22 12:18:52] 2025-11-22 17:17:44,255 | INFO     | . log creation = 0 s
[2025-11-22 12:18:52] 2025-11-22 17:17:44,255 | INFO     | ..............................
[2025-11-22 12:18:52] 2025-11-22 17:17:44,347 | INFO     | 
[2025-11-22 12:18:52] 2025-11-22 17:17:44,347 | INFO     | job summary report
[2025-11-22 12:18:52] 2025-11-22 17:17:44,348 | INFO     | --------------------------------------------------
[2025-11-22 12:18:52] 2025-11-22 17:17:44,348 | INFO     | PanDA job id: 6894275553
[2025-11-22 12:18:52] 2025-11-22 17:17:44,348 | INFO     | task id: 47533967
[2025-11-22 12:18:52] 2025-11-22 17:17:44,348 | INFO     | errors: (none)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,348 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 12:18:52] 2025-11-22 17:17:44,349 | INFO     | pilot state: finished 
[2025-11-22 12:18:52] 2025-11-22 17:17:44,349 | INFO     | transexitcode: 0
[2025-11-22 12:18:52] 2025-11-22 17:17:44,349 | INFO     | exeerrorcode: 0
[2025-11-22 12:18:52] 2025-11-22 17:17:44,349 | INFO     | exeerrordiag: 
[2025-11-22 12:18:52] 2025-11-22 17:17:44,349 | INFO     | exitcode: 0
[2025-11-22 12:18:52] 2025-11-22 17:17:44,349 | INFO     | exitmsg: OK
[2025-11-22 12:18:52] 2025-11-22 17:17:44,350 | INFO     | cpuconsumptiontime: 318321 s
[2025-11-22 12:18:52] 2025-11-22 17:17:44,350 | INFO     | nevents: 1000
[2025-11-22 12:18:52] 2025-11-22 17:17:44,350 | INFO     | neventsw: 0
[2025-11-22 12:18:52] 2025-11-22 17:17:44,350 | INFO     | pid: 31770
[2025-11-22 12:18:52] 2025-11-22 17:17:44,350 | INFO     | pgrp: 31770
[2025-11-22 12:18:52] 2025-11-22 17:17:44,350 | INFO     | corecount: 8
[2025-11-22 12:18:52] 2025-11-22 17:17:44,351 | INFO     | event service: False
[2025-11-22 12:18:52] 2025-11-22 17:17:44,351 | INFO     | sizes: {0: 2298806, 6: 2299068, 11: 2299096, 41078: 2343110, 41082: 2352104, 41083: 2352160, 41089: 2352534}
[2025-11-22 12:18:52] 2025-11-22 17:17:44,351 | INFO     | --------------------------------------------------
[2025-11-22 12:18:52] 2025-11-22 17:17:44,351 | INFO     | 
[2025-11-22 12:18:52] 2025-11-22 17:17:44,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 12:18:52] 2025-11-22 17:17:44,379 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,380 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,380 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,380 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,383 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,383 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 12:18:52] 2025-11-22 17:17:44,383 | INFO     | job 6894275553 has completed (purged errors)
[2025-11-22 12:18:52] 2025-11-22 17:17:44,384 | INFO     | overall cleanup function is called
[2025-11-22 12:18:52] 2025-11-22 17:17:45,397 | INFO     | --- collectZombieJob: --- 10, [31770]
[2025-11-22 12:18:52] 2025-11-22 17:17:45,397 | INFO     | zombie collector waiting for pid 31770
[2025-11-22 12:18:52] 2025-11-22 17:17:45,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 12:18:52] 2025-11-22 17:17:45,398 | INFO     | collected zombie processes
[2025-11-22 12:18:52] 2025-11-22 17:17:45,398 | INFO     | will attempt to kill all subprocesses of pid=31770
[2025-11-22 12:18:52] 2025-11-22 17:17:45,481 | INFO     | process IDs to be killed: [31770] (in reverse order)
[2025-11-22 12:18:52] 2025-11-22 17:17:45,537 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 12:18:52] 2025-11-22 17:17:45,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 12:18:52] 2025-11-22 17:17:45,540 | INFO     | did not find any defunct processes belonging to 31770
[2025-11-22 12:18:52] 2025-11-22 17:17:45,544 | INFO     | did not find any defunct processes belonging to 31770
[2025-11-22 12:18:52] 2025-11-22 17:17:45,547 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 12:18:52] 2025-11-22 17:17:45,547 | INFO     | ready for new job
[2025-11-22 12:18:52] 2025-11-22 17:17:45,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 12:18:52] 2025-11-22 17:17:45,550 | INFO     | ***************************************
[2025-11-22 12:18:52] 2025-11-22 17:17:45,551 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 12:18:52] 2025-11-22 17:17:45,551 | INFO     | ***************************************
[2025-11-22 12:18:52] 2025-11-22 17:17:45,551 | INFO     | 
[2025-11-22 12:18:52] 2025-11-22 17:17:45,551 | INFO     | architecture information:
[2025-11-22 12:18:52] 2025-11-22 17:17:45,552 | INFO     | executing command: cat /etc/os-release
[2025-11-22 12:18:52] 2025-11-22 17:17:45,570 | INFO     | cat /etc/os-release:
[2025-11-22 12:18:52] NAME="CentOS Linux"
[2025-11-22 12:18:52] VERSION="7 (Core)"
[2025-11-22 12:18:52] ID="centos"
[2025-11-22 12:18:52] ID_LIKE="rhel fedora"
[2025-11-22 12:18:52] VERSION_ID="7"
[2025-11-22 12:18:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 12:18:52] ANSI_COLOR="0;31"
[2025-11-22 12:18:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 12:18:52] HOME_URL="https://www.centos.org/"
[2025-11-22 12:18:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 12:18:52] 
[2025-11-22 12:18:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 12:18:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 12:18:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 12:18:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 12:18:52] 
[2025-11-22 12:18:52] 2025-11-22 17:17:45,570 | INFO     | ***************************************
[2025-11-22 12:18:52] 2025-11-22 17:17:46,073 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 12:18:52] 2025-11-22 17:17:46,093 | INFO     | sufficient remaining disk space (17455644672 B)
[2025-11-22 12:18:52] 2025-11-22 17:17:46,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 12:18:52] 2025-11-22 17:17:46,094 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 12:18:52] 2025-11-22 17:17:46,094 | INFO     | update_server=False
[2025-11-22 12:18:52] 2025-11-22 17:17:46,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 12:18:52] 2025-11-22 17:17:46,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 12:18:52] 2025-11-22 17:17:46,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 12:18:52] 2025-11-22 17:17:46,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 12:18:52] 2025-11-22 17:17:46,096 | INFO     | aborting loop
[2025-11-22 12:18:52] 2025-11-22 17:17:46,350 | INFO     | all payload control threads have been joined
[2025-11-22 12:18:52] 2025-11-22 17:17:46,964 | INFO     | all data control threads have been joined
[2025-11-22 12:18:52] 2025-11-22 17:17:47,099 | INFO     | [job] job monitor thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,100 | INFO     | [job] retrieve thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,101 | INFO     | [job] queue monitor thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,121 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,210 | INFO     | [data] copytool_in thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,220 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,297 | INFO     | [payload] failed_post thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,356 | INFO     | [payload] control thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,466 | INFO     | all job control threads have been joined
[2025-11-22 12:18:52] 2025-11-22 17:17:47,624 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,705 | INFO     | [job] validate thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:47,969 | INFO     | [data] control thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:48,101 | INFO     | [data] copytool_out thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:48,472 | INFO     | [job] control thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:48,635 | INFO     | [payload] validate_post thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:48,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 12:18:52] 2025-11-22 17:17:52,643 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:17:56,219 | INFO     | job.realtimelogging is not enabled
[2025-11-22 12:18:52] 2025-11-22 17:17:57,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 12:18:52] 2025-11-22 17:18:16,459 | INFO     | PID=25246 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 12:18:52] 2025-11-22 17:18:16,459 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 12:18:52] 2025-11-22 17:18:16,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 12:18:52] 2025-11-22 17:18:16,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 12:18:52] 2025-11-22 17:18:46,035 | INFO     | [monitor] cgroup control has ended
[2025-11-22 12:18:52] 2025-11-22 17:18:47,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343279146816)>', '<ExcThread(monitor, started 140342401685248)>']
[2025-11-22 12:18:52] 2025-11-22 17:18:47,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 12:18:52] 2025-11-22 17:18:47,599 | INFO     | [monitor] control thread has ended
[2025-11-22 12:18:52] 2025-11-22 17:18:52,352 | INFO     | all workflow threads have been joined
[2025-11-22 12:18:52] 2025-11-22 17:18:52,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 12:18:52] 2025-11-22 17:18:52,353 | INFO     | traces error code: 0
[2025-11-22 12:18:52] 2025-11-22 17:18:52,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 12:18:52] 2025-11-22 17:18:52,482 [wrapper] ==== pilot stdout END ====
[2025-11-22 12:18:52] 2025-11-22 17:18:52,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 12:18:52] 2025-11-22 17:18:52,492 [wrapper] pilotpid: 25246
[2025-11-22 12:18:52] 2025-11-22 17:18:52,497 [wrapper] Pilot exit status: 0
[2025-11-22 12:18:52] 2025-11-22 17:18:52,513 [wrapper] pandaids: 6894275553
[2025-11-22 12:18:52] 2025-11-22 17:18:52,563 [wrapper] cleanup supervisor_pilot 22519 25247
[2025-11-22 12:18:52] 2025-11-22 17:18:52,568 [wrapper] Test setup, not cleaning
[2025-11-22 12:18:52] 2025-11-22 17:18:52,572 [wrapper] apfmon messages muted
[2025-11-22 12:18:52] 2025-11-22 17:18:52,576 [wrapper] ==== wrapper stdout END ====
[2025-11-22 12:18:52] 2025-11-22 17:18:52,581 [wrapper] ==== wrapper stderr END ====
[2025-11-22 12:18:52]  *** Error codes and diagnostics ***
[2025-11-22 12:18:52]     "exeErrorCode": 0,
[2025-11-22 12:18:52]     "exeErrorDiag": "",
[2025-11-22 12:18:52]     "pilotErrorCode": 0,
[2025-11-22 12:18:52]     "pilotErrorDiag": "",
[2025-11-22 12:18:52]  *** Listing of results directory ***
[2025-11-22 12:18:52] total 1328548
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 02:07 pilot3.tar.gz
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 02:36 queuedata.json
[2025-11-22 12:18:52] -rwx------ 1 boincer umatlas     36292 Nov 21 02:36 runpilot2-wrapper.sh
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas       100 Nov 22 00:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 12:18:52] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 00:52 run_atlas
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas       105 Nov 22 00:52 job.xml
[2025-11-22 12:18:52] -rw-r--r-- 2 boincer umatlas 410618870 Nov 22 00:52 EVNT.47493127._002310.pool.root.1
[2025-11-22 12:18:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 00:52 start_atlas.sh
[2025-11-22 12:18:52] drwxrwx--x 2 boincer umatlas      4096 Nov 22 00:52 shared
[2025-11-22 12:18:52] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 00:52 input.tar.gz
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas         0 Nov 22 00:52 boinc_lockfile
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 00:52 pandaJob.out
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas        57 Nov 22 00:52 setup.sh.local
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas    989752 Nov 22 00:52 agis_schedconf.cvmfs.json
[2025-11-22 12:18:52] drwx------ 5 boincer umatlas      4096 Nov 22 00:52 pilot3
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas       533 Nov 22 12:06 boinc_task_state.xml
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 12:11 init_data.xml
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas 930675901 Nov 22 12:16 HITS.47533967._002818.pool.root.1
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas      1063 Nov 22 12:17 memory_monitor_summary.json
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas   1526164 Nov 22 12:17 agis_ddmendpoints.agis.ALL.json
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas   1931451 Nov 22 12:17 log.47533967._002818.job.log.tgz.1
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas      8660 Nov 22 12:17 heartbeat.json
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas        95 Nov 22 12:18 pilot_heartbeat.json
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 12:18 boinc_mmap_file
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas        29 Nov 22 12:18 wrapper_checkpoint.txt
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas      4818 Nov 22 12:18 pilotlog.txt
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas   5673443 Nov 22 12:18 log.47533967._002818.job.log.1
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas       353 Nov 22 12:18 output.list
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas       620 Nov 22 12:18 runtime_log
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas   7628800 Nov 22 12:18 result.tar.gz
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 12:18 runtime_log.err
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas       668 Nov 22 12:18 pakKDmYsag8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmRHKDmJAGQun.diag
[2025-11-22 12:18:52] -rw-r--r-- 1 boincer umatlas     21078 Nov 22 12:18 stderr.txt
[2025-11-22 12:18:52] HITS file was successfully produced:
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas 930675901 Nov 22 12:16 shared/HITS.pool.root.1
[2025-11-22 12:18:52]  *** Contents of shared directory: ***
[2025-11-22 12:18:52] total 1317912
[2025-11-22 12:18:52] -rw-r--r-- 2 boincer umatlas 410618870 Nov 22 00:52 ATLAS.root_0
[2025-11-22 12:18:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 00:52 start_atlas.sh
[2025-11-22 12:18:52] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 00:52 input.tar.gz
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas 930675901 Nov 22 12:16 HITS.pool.root.1
[2025-11-22 12:18:52] -rw------- 1 boincer umatlas   7628800 Nov 22 12:18 result.tar.gz
12:18:54 (21508): run_atlas exited; CPU time 316096.039829
12:18:54 (21508): called boinc_finish(0)

</stderr_txt>
]]>

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