Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
23:13:02 (115209): wrapper (7.7.26015): starting
23:13:02 (115209): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:13:02] Arguments: --nthreads 8
[2025-11-22 23:13:02] Threads: 8
[2025-11-22 23:13:02] Checking for CVMFS
[2025-11-22 23:13:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:13:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:13:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:13:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:13:03] 2.13.3.0 4524 3070 65592 153200 1 49 1558053 4096001 5652 130560 0 457666649 99.999 613886 826 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-22 23:13:03] CVMFS is ok
[2025-11-22 23:13:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:13:03] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 23:13:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 23:13:03] Further information can be found at the LHC@home message board.
[2025-11-22 23:13:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:13:03] Checking for apptainer binary...
[2025-11-22 23:13:03] apptainer is not installed, using version from CVMFS
[2025-11-22 23:13:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:13:04] 7950x-linux
[2025-11-22 23:13:04] apptainer works
[2025-11-22 23:13:04] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:13:04] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:13:04] Starting ATLAS job with PandaID=6894274127
[2025-11-22 23:13:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc505/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 13:24:07]  *** The last 200 lines of the pilot log: ***
[2025-11-23 13:24:07] 2025-11-23 21:23:32,983 | INFO     | PID=119426 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 13:24:07] 2025-11-23 21:23:32,983 | INFO     | .. there are 14 such processes running
[2025-11-23 13:24:07] 2025-11-23 21:23:33,753 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 13:24:07] 2025-11-23 21:23:33,757 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.86015625
[2025-11-23 13:24:07] 2025-11-23 21:23:33,762 | INFO     | using path: /var/lib/multiboinc/boinc505/slots/3/PanDA_Pilot-6894274127/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,762 | INFO     | extracted standard info from prmon json
[2025-11-23 13:24:07] 2025-11-23 21:23:33,762 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 13:24:07] 2025-11-23 21:23:33,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 13:24:07] 2025-11-23 21:23:33,771 | INFO     | fitting pss+swap vs Time
[2025-11-23 13:24:07] 2025-11-23 21:23:33,771 | INFO     | sum of square deviations: 181174034668.94058
[2025-11-23 13:24:07] 2025-11-23 21:23:33,780 | INFO     | sum of deviations: 943836636615.7649
[2025-11-23 13:24:07] 2025-11-23 21:23:33,780 | INFO     | mean x: 1763907490.5083733
[2025-11-23 13:24:07] 2025-11-23 21:23:33,780 | INFO     | mean y: 2886542.8193779904
[2025-11-23 13:24:07] 2025-11-23 21:23:33,780 | INFO     | intersect: -9186291786.100334
[2025-11-23 13:24:07] 2025-11-23 21:23:33,780 | INFO     | chi2: 5.116313431634388
[2025-11-23 13:24:07] 2025-11-23 21:23:33,781 | INFO     | sum of square deviations: 177942701798.94092
[2025-11-23 13:24:07] 2025-11-23 21:23:33,789 | INFO     | sum of deviations: 1172419104411.6296
[2025-11-23 13:24:07] 2025-11-23 21:23:33,789 | INFO     | mean x: 1763907338.0084236
[2025-11-23 13:24:07] 2025-11-23 21:23:33,789 | INFO     | mean y: 2897323.052948255
[2025-11-23 13:24:07] 2025-11-23 21:23:33,789 | INFO     | intersect: -11619038505.647873
[2025-11-23 13:24:07] 2025-11-23 21:23:33,789 | INFO     | chi2: 2.8817010647750796
[2025-11-23 13:24:07] 2025-11-23 21:23:33,790 | INFO     | current chi2=2.8817010647750796 (change=43.6762211056618 %)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,790 | INFO     | sum of square deviations: 174750020816.44083
[2025-11-23 13:24:07] 2025-11-23 21:23:33,798 | INFO     | sum of deviations: 1245507644433.0325
[2025-11-23 13:24:07] 2025-11-23 21:23:33,798 | INFO     | mean x: 1763907185.5084746
[2025-11-23 13:24:07] 2025-11-23 21:23:33,798 | INFO     | mean y: 2900806.7094430993
[2025-11-23 13:24:07] 2025-11-23 21:23:33,798 | INFO     | intersect: -12569114197.104885
[2025-11-23 13:24:07] 2025-11-23 21:23:33,799 | INFO     | chi2: 2.5166242615318817
[2025-11-23 13:24:07] 2025-11-23 21:23:33,799 | INFO     | current chi2=2.5166242615318817 (change=12.668795098345589 %)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,799 | INFO     | right removable region: 825
[2025-11-23 13:24:07] 2025-11-23 21:23:33,799 | INFO     | sum of square deviations: 177942697528.94092
[2025-11-23 13:24:07] 2025-11-23 21:23:33,813 | INFO     | sum of deviations: 706849373867.5509
[2025-11-23 13:24:07] 2025-11-23 21:23:33,814 | INFO     | mean x: 1763907643.0084236
[2025-11-23 13:24:07] 2025-11-23 21:23:33,814 | INFO     | mean y: 2897712.2069795425
[2025-11-23 13:24:07] 2025-11-23 21:23:33,814 | INFO     | intersect: -7003947920.31979
[2025-11-23 13:24:07] 2025-11-23 21:23:33,815 | INFO     | chi2: 2.7608491191083733
[2025-11-23 13:24:07] 2025-11-23 21:23:33,815 | INFO     | current chi2=2.7608491191083733 (change=46.03831145218892 %)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,816 | INFO     | sum of square deviations: 174750012276.4408
[2025-11-23 13:24:07] 2025-11-23 21:23:33,833 | INFO     | sum of deviations: 655460507788.8469
[2025-11-23 13:24:07] 2025-11-23 21:23:33,833 | INFO     | mean x: 1763907795.5084746
[2025-11-23 13:24:07] 2025-11-23 21:23:33,833 | INFO     | mean y: 2900165.450363196
[2025-11-23 13:24:07] 2025-11-23 21:23:33,833 | INFO     | intersect: -6613247577.6909485
[2025-11-23 13:24:07] 2025-11-23 21:23:33,833 | INFO     | chi2: 2.704093437386641
[2025-11-23 13:24:07] 2025-11-23 21:23:33,833 | INFO     | current chi2=2.704093437386641 (change=2.055732829762959 %)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,833 | INFO     | left removable region: 20
[2025-11-23 13:24:07] 2025-11-23 21:23:33,834 | INFO     | sum of square deviations: 161757573750.93826
[2025-11-23 13:24:07] 2025-11-23 21:23:33,850 | INFO     | sum of deviations: 893006870232.7576
[2025-11-23 13:24:07] 2025-11-23 21:23:33,851 | INFO     | mean x: 1763907765.0086956
[2025-11-23 13:24:07] 2025-11-23 21:23:33,851 | INFO     | mean y: 2918169.0347826085
[2025-11-23 13:24:07] 2025-11-23 21:23:33,852 | INFO     | intersect: -9734998369.17329
[2025-11-23 13:24:07] 2025-11-23 21:23:33,853 | INFO     | chi2: 0.06360132907365838
[2025-11-23 13:24:07] 2025-11-23 21:23:33,853 | INFO     | current memory leak: 5.52 B/s (using 805 data points, chi2=0.06)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | could have reported an average CPU frequency of 3999 MHz (32 samples)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | ..............................
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | . Timing measurements:
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | . get job = 0 s
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | . initial setup = 3 s
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | . payload setup = 5 s
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | . stage-in = 0 s
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | . payload execution = 50977 s
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | . stage-out = 4 s
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | . log creation = 0 s
[2025-11-23 13:24:07] 2025-11-23 21:23:33,855 | INFO     | ..............................
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | 
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | job summary report
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | --------------------------------------------------
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | PanDA job id: 6894274127
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | task id: 47533967
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | errors: (none)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | pilot state: finished 
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | transexitcode: 0
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | exeerrorcode: 0
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | exeerrordiag: 
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | exitcode: 0
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | exitmsg: OK
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | cpuconsumptiontime: 134158 s
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | nevents: 1000
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | neventsw: 0
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | pid: 136322
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | pgrp: 136322
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | corecount: 8
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | event service: False
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | sizes: {0: 2298821, 4: 2299083, 11: 2299111, 50986: 2347680, 50992: 2356758, 51000: 2356948}
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | --------------------------------------------------
[2025-11-23 13:24:07] 2025-11-23 21:23:33,955 | INFO     | 
[2025-11-23 13:24:07] 2025-11-23 21:23:33,956 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc505/slots/3
[2025-11-23 13:24:07] 2025-11-23 21:23:33,983 | INFO     | time since job start (51015s) is within the limit (172800.0s)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,989 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 13:24:07] 2025-11-23 21:23:33,990 | INFO     | job 6894274127 has completed (purged errors)
[2025-11-23 13:24:07] 2025-11-23 21:23:33,990 | INFO     | overall cleanup function is called
[2025-11-23 13:24:07] 2025-11-23 21:23:35,008 | INFO     | --- collectZombieJob: --- 10, [136322]
[2025-11-23 13:24:07] 2025-11-23 21:23:35,008 | INFO     | zombie collector waiting for pid 136322
[2025-11-23 13:24:07] 2025-11-23 21:23:35,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 13:24:07] 2025-11-23 21:23:35,008 | INFO     | collected zombie processes
[2025-11-23 13:24:07] 2025-11-23 21:23:35,008 | INFO     | will attempt to kill all subprocesses of pid=136322
[2025-11-23 13:24:07] 2025-11-23 21:23:35,330 | INFO     | process IDs to be killed: [136322] (in reverse order)
[2025-11-23 13:24:07] 2025-11-23 21:23:35,510 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 13:24:07] 2025-11-23 21:23:35,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 13:24:07] 2025-11-23 21:23:35,516 | INFO     | did not find any defunct processes belonging to 136322
[2025-11-23 13:24:07] 2025-11-23 21:23:35,522 | INFO     | did not find any defunct processes belonging to 136322
[2025-11-23 13:24:07] 2025-11-23 21:23:35,523 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 13:24:07] 2025-11-23 21:23:35,523 | INFO     | ready for new job
[2025-11-23 13:24:07] 2025-11-23 21:23:35,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 13:24:07] 2025-11-23 21:23:35,526 | INFO     | ***************************************
[2025-11-23 13:24:07] 2025-11-23 21:23:35,526 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 13:24:07] 2025-11-23 21:23:35,526 | INFO     | ***************************************
[2025-11-23 13:24:07] 2025-11-23 21:23:35,526 | INFO     | 
[2025-11-23 13:24:07] 2025-11-23 21:23:35,527 | INFO     | architecture information:
[2025-11-23 13:24:07] 2025-11-23 21:23:35,528 | INFO     | executing command: cat /etc/os-release
[2025-11-23 13:24:07] 2025-11-23 21:23:35,543 | INFO     | cat /etc/os-release:
[2025-11-23 13:24:07] NAME="CentOS Linux"
[2025-11-23 13:24:07] VERSION="7 (Core)"
[2025-11-23 13:24:07] ID="centos"
[2025-11-23 13:24:07] ID_LIKE="rhel fedora"
[2025-11-23 13:24:07] VERSION_ID="7"
[2025-11-23 13:24:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 13:24:07] ANSI_COLOR="0;31"
[2025-11-23 13:24:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 13:24:07] HOME_URL="https://www.centos.org/"
[2025-11-23 13:24:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 13:24:07] 
[2025-11-23 13:24:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 13:24:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 13:24:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 13:24:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 13:24:07] 
[2025-11-23 13:24:07] 2025-11-23 21:23:35,543 | INFO     | ***************************************
[2025-11-23 13:24:07] 2025-11-23 21:23:36,046 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc505/slots/3
[2025-11-23 13:24:07] 2025-11-23 21:23:36,068 | INFO     | sufficient remaining disk space (173909475328 B)
[2025-11-23 13:24:07] 2025-11-23 21:23:36,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 13:24:07] 2025-11-23 21:23:36,068 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 13:24:07] 2025-11-23 21:23:36,068 | INFO     | update_server=False
[2025-11-23 13:24:07] 2025-11-23 21:23:36,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 13:24:07] 2025-11-23 21:23:36,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 13:24:07] 2025-11-23 21:23:36,068 | INFO     | aborting loop
[2025-11-23 13:24:07] 2025-11-23 21:23:36,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 13:24:07] 2025-11-23 21:23:36,256 | INFO     | all data control threads have been joined
[2025-11-23 13:24:07] 2025-11-23 21:23:36,470 | INFO     | all payload control threads have been joined
[2025-11-23 13:24:07] 2025-11-23 21:23:36,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 13:24:07] 2025-11-23 21:23:37,072 | INFO     | [job] retrieve thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:37,073 | INFO     | [job] job monitor thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:37,110 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:37,154 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:37,195 | INFO     | [payload] validate_post thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:37,224 | INFO     | [job] validate thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:37,261 | INFO     | [data] control thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:37,475 | INFO     | [payload] control thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:37,583 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:37,625 | INFO     | all job control threads have been joined
[2025-11-23 13:24:07] 2025-11-23 21:23:38,121 | INFO     | [data] copytool_out thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:38,267 | INFO     | [data] copytool_in thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:38,364 | INFO     | [payload] failed_post thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:38,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:38,630 | INFO     | [job] control thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:38,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 13:24:07] 2025-11-23 21:23:39,972 | INFO     | [job] queue monitor thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:40,634 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 13:24:07] 2025-11-23 21:23:42,795 | INFO     | [monitor] cgroup control has ended
[2025-11-23 13:24:07] 2025-11-23 21:23:43,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125213273900864)>', '<ExcThread(monitor, started 125212179818240)>']
[2025-11-23 13:24:07] 2025-11-23 21:23:48,487 | INFO     | all workflow threads have been joined
[2025-11-23 13:24:07] 2025-11-23 21:23:48,488 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 13:24:07] 2025-11-23 21:23:48,488 | INFO     | traces error code: 0
[2025-11-23 13:24:07] 2025-11-23 21:23:48,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 13:24:07] 2025-11-23 21:24:07,336 | INFO     | PID=119426 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 13:24:07] 2025-11-23 21:24:07,336 | INFO     | .. there are 14 such processes running
[2025-11-23 13:24:07] 2025-11-23 21:24:07,336 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 13:24:07] 2025-11-23 21:24:07,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 13:24:07] 2025-11-23 21:24:07,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 13:24:07] 2025-11-23 21:24:07,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 13:24:07] 2025-11-23 21:24:07,336 | INFO     | [monitor] control thread has ended
[2025-11-23 13:24:07] 2025-11-23 21:24:07,433 [wrapper] ==== pilot stdout END ====
[2025-11-23 13:24:07] 2025-11-23 21:24:07,437 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 13:24:07] 2025-11-23 21:24:07,439 [wrapper] pilotpid: 119426
[2025-11-23 13:24:07] 2025-11-23 21:24:07,440 [wrapper] Pilot exit status: 0
[2025-11-23 13:24:07] 2025-11-23 21:24:07,450 [wrapper] pandaids: 6894274127
[2025-11-23 13:24:07] 2025-11-23 21:24:07,518 [wrapper] cleanup supervisor_pilot 1216278 119427
[2025-11-23 13:24:07] 2025-11-23 21:24:07,521 [wrapper] Test setup, not cleaning
[2025-11-23 13:24:07] 2025-11-23 21:24:07,522 [wrapper] apfmon messages muted
[2025-11-23 13:24:07] 2025-11-23 21:24:07,524 [wrapper] ==== wrapper stdout END ====
[2025-11-23 13:24:07] 2025-11-23 21:24:07,526 [wrapper] ==== wrapper stderr END ====
[2025-11-23 13:24:07]  *** Error codes and diagnostics ***
[2025-11-23 13:24:07]     "exeErrorCode": 0,
[2025-11-23 13:24:07]     "exeErrorDiag": "",
[2025-11-23 13:24:07]     "pilotErrorCode": 0,
[2025-11-23 13:24:07]     "pilotErrorDiag": "",
[2025-11-23 13:24:07]  *** Listing of results directory ***
[2025-11-23 13:24:07] total 1328068
[2025-11-23 13:24:07] -rw-r--r-- 1 root root    576529 Nov 20 23:07 pilot3.tar.gz
[2025-11-23 13:24:07] -rwx------ 1 4871 1028     36292 Nov 20 23:23 runpilot2-wrapper.sh
[2025-11-23 13:24:07] -rw-r--r-- 1 root root      5112 Nov 20 23:23 queuedata.json
[2025-11-23 13:24:07] -rw-r--r-- 1 root root       100 Nov 22 23:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 13:24:07] -rwxr-xr-x 1 root root      7986 Nov 22 23:13 run_atlas
[2025-11-23 13:24:07] -rw-r--r-- 1 root root       105 Nov 22 23:13 job.xml
[2025-11-23 13:24:07] -rw-r--r-- 2 root root 414750248 Nov 22 23:13 EVNT.47493127._002301.pool.root.1
[2025-11-23 13:24:07] -rw-r--r-- 2 root root     15847 Nov 22 23:13 start_atlas.sh
[2025-11-23 13:24:07] drwxrwx--x 2 root root      4096 Nov 22 23:13 shared
[2025-11-23 13:24:07] -rw-r--r-- 2 root root    590098 Nov 22 23:13 input.tar.gz
[2025-11-23 13:24:07] -rw-r--r-- 1 root root         0 Nov 22 23:13 boinc_lockfile
[2025-11-23 13:24:07] -rw-r--r-- 1 root root      2786 Nov 22 23:13 pandaJob.out
[2025-11-23 13:24:07] -rw------- 1 root root    989784 Nov 22 23:13 agis_schedconf.cvmfs.json
[2025-11-23 13:24:07] drwxr-xr-x 5  320  320      4096 Nov 22 23:13 pilot3
[2025-11-23 13:24:07] -rw-r--r-- 1 root root      7082 Nov 23 10:59 init_data.xml
[2025-11-23 13:24:07] -rw-r--r-- 1 root root       532 Nov 23 13:12 boinc_task_state.xml
[2025-11-23 13:24:07] -rw------- 1 root root 922656771 Nov 23 13:22 HITS.47533967._002730.pool.root.1
[2025-11-23 13:24:07] -rw------- 1 root root      1053 Nov 23 13:23 memory_monitor_summary.json
[2025-11-23 13:24:07] -rw------- 1 root root   1526164 Nov 23 13:23 agis_ddmendpoints.agis.ALL.json
[2025-11-23 13:24:07] -rw------- 1 root root   2026019 Nov 23 13:23 log.47533967._002730.job.log.tgz.1
[2025-11-23 13:24:07] -rw------- 1 root root      8597 Nov 23 13:23 heartbeat.json
[2025-11-23 13:24:07] -rw-r--r-- 1 root root        29 Nov 23 13:24 wrapper_checkpoint.txt
[2025-11-23 13:24:07] -rw-r--r-- 1 root root      8192 Nov 23 13:24 boinc_mmap_file
[2025-11-23 13:24:07] -rw------- 1 root root        95 Nov 23 13:24 pilot_heartbeat.json
[2025-11-23 13:24:07] -rw------- 1 root root       822 Nov 23 13:24 pilotlog.txt
[2025-11-23 13:24:07] -rw------- 1 root root   7278493 Nov 23 13:24 log.47533967._002730.job.log.1
[2025-11-23 13:24:07] -rw------- 1 root root       353 Nov 23 13:24 output.list
[2025-11-23 13:24:07] -rw-r--r-- 1 root root       620 Nov 23 13:24 runtime_log
[2025-11-23 13:24:07] -rw------- 1 root root   9328640 Nov 23 13:24 result.tar.gz
[2025-11-23 13:24:07] -rw-r--r-- 1 root root      9019 Nov 23 13:24 runtime_log.err
[2025-11-23 13:24:07] -rw------- 1 root root       663 Nov 23 13:24 HUdNDmEfag8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5BJKDm031qdn.diag
[2025-11-23 13:24:07] -rw-r--r-- 1 root root     21492 Nov 23 13:24 stderr.txt
[2025-11-23 13:24:07] HITS file was successfully produced:
[2025-11-23 13:24:07] -rw------- 1 root root 922656771 Nov 23 13:22 shared/HITS.pool.root.1
[2025-11-23 13:24:07]  *** Contents of shared directory: ***
[2025-11-23 13:24:07] total 1315784
[2025-11-23 13:24:07] -rw-r--r-- 2 root root 414750248 Nov 22 23:13 ATLAS.root_0
[2025-11-23 13:24:07] -rw-r--r-- 2 root root     15847 Nov 22 23:13 start_atlas.sh
[2025-11-23 13:24:07] -rw-r--r-- 2 root root    590098 Nov 22 23:13 input.tar.gz
[2025-11-23 13:24:07] -rw------- 1 root root 922656771 Nov 23 13:22 HITS.pool.root.1
[2025-11-23 13:24:07] -rw------- 1 root root   9328640 Nov 23 13:24 result.tar.gz
13:24:08 (115209): run_atlas exited; CPU time 134330.753398
13:24:08 (115209): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN