Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:43:38 (5922): wrapper (7.7.26015): starting
20:43:38 (5922): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 20:43:38] Arguments: --nthreads 8
[2025-11-24 20:43:38] Threads: 8
[2025-11-24 20:43:38] Checking for CVMFS
[2025-11-24 20:43:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 20:43:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 20:43:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 20:43:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 20:43:41] 2.11.2.0 29208 219905 135680 153257 1 85 17413025 25165824 1027 130560 8 95516571 99.900 38626974 2366 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 20:43:41] CVMFS is ok
[2025-11-24 20:43:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 20:43:41] Checking for apptainer binary...
[2025-11-24 20:43:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 20:43:41] Running /usr/bin/apptainer --version
[2025-11-24 20:43:41] apptainer version 1.3.2-1.el7
[2025-11-24 20:43:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 20:44:01] cg-vwn345.simple-grid.lan
[2025-11-24 20:44:01] apptainer works
[2025-11-24 20:44:01] Set ATHENA_PROC_NUMBER=8
[2025-11-24 20:44:01] Set ATHENA_CORE_NUMBER=8
[2025-11-24 20:44:01] Starting ATLAS job with PandaID=6894274441
[2025-11-24 20:44:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:23:34]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:23:34] 2025-11-25 21:22:47,117 | INFO     | time since job start (92065s) is within the limit (172800.0s)
[2025-11-25 22:23:34] 2025-11-25 21:22:47,775 | INFO     | monitor loop #6173: job 0:6894274441 is in state 'finished'
[2025-11-25 22:23:34] 2025-11-25 21:22:47,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:23:34] 2025-11-25 21:22:49,124 | INFO     | time since job start (92067s) is within the limit (172800.0s)
[2025-11-25 22:23:34] 2025-11-25 21:22:50,284 | INFO     | monitor loop #6174: job 0:6894274441 is in state 'finished'
[2025-11-25 22:23:34] 2025-11-25 21:22:50,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:23:34] 2025-11-25 21:22:51,131 | INFO     | time since job start (92069s) is within the limit (172800.0s)
[2025-11-25 22:23:34] 2025-11-25 21:22:52,798 | INFO     | monitor loop #6175: job 0:6894274441 is in state 'finished'
[2025-11-25 22:23:34] 2025-11-25 21:22:52,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:23:34] 2025-11-25 21:22:53,138 | INFO     | time since job start (92071s) is within the limit (172800.0s)
[2025-11-25 22:23:34] 2025-11-25 21:22:55,147 | INFO     | time since job start (92073s) is within the limit (172800.0s)
[2025-11-25 22:23:34] 2025-11-25 21:22:55,305 | INFO     | monitor loop #6176: job 0:6894274441 is in state 'finished'
[2025-11-25 22:23:34] 2025-11-25 21:22:55,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:23:34] 2025-11-25 21:22:57,163 | INFO     | time since job start (92075s) is within the limit (172800.0s)
[2025-11-25 22:23:34] 2025-11-25 21:22:57,811 | INFO     | monitor loop #6177: job 0:6894274441 is in state 'finished'
[2025-11-25 22:23:34] 2025-11-25 21:22:57,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:23:34] 2025-11-25 21:22:58,078 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 22:23:34] 2025-11-25 21:22:58,080 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 22:23:34] 2025-11-25 21:22:58,085 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6894274441/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:23:34] 2025-11-25 21:22:58,086 | INFO     | extracted standard info from prmon json
[2025-11-25 22:23:34] 2025-11-25 21:22:58,086 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:23:34] 2025-11-25 21:22:58,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:23:34] 2025-11-25 21:22:58,115 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:23:34] 2025-11-25 21:22:58,118 | INFO     | sum of square deviations: 1044444794745.0242
[2025-11-25 22:23:34] 2025-11-25 21:22:58,191 | INFO     | sum of deviations: 3949041147342.357
[2025-11-25 22:23:34] 2025-11-25 21:22:58,192 | INFO     | mean x: 1764059960.2221482
[2025-11-25 22:23:34] 2025-11-25 21:22:58,192 | INFO     | mean y: 2829159.176117412
[2025-11-25 22:23:34] 2025-11-25 21:22:58,192 | INFO     | intersect: -6667073744.593008
[2025-11-25 22:23:34] 2025-11-25 21:22:58,194 | INFO     | chi2: 29.314282418259037
[2025-11-25 22:23:34] 2025-11-25 21:22:58,197 | INFO     | sum of square deviations: 1034028814005.0336
[2025-11-25 22:23:34] 2025-11-25 21:22:58,256 | INFO     | sum of deviations: 4437673608024.251
[2025-11-25 22:23:34] 2025-11-25 21:22:58,257 | INFO     | mean x: 1764059807.7262383
[2025-11-25 22:23:34] 2025-11-25 21:22:58,257 | INFO     | mean y: 2836312.1619812585
[2025-11-25 22:23:34] 2025-11-25 21:22:58,257 | INFO     | intersect: -7567863406.932069
[2025-11-25 22:23:34] 2025-11-25 21:22:58,259 | INFO     | chi2: 26.127688158154452
[2025-11-25 22:23:34] 2025-11-25 21:22:58,259 | INFO     | current chi2=26.127688158154452 (change=10.870449477964177 %)
[2025-11-25 22:23:34] 2025-11-25 21:22:58,260 | INFO     | right removable region: 1493
[2025-11-25 22:23:34] 2025-11-25 21:22:58,262 | INFO     | sum of square deviations: 1034027696485.0354
[2025-11-25 22:23:34] 2025-11-25 21:22:58,326 | INFO     | sum of deviations: 3329860675481.3193
[2025-11-25 22:23:34] 2025-11-25 21:22:58,326 | INFO     | mean x: 1764060112.7262383
[2025-11-25 22:23:34] 2025-11-25 21:22:58,326 | INFO     | mean y: 2838223.093708166
[2025-11-25 22:23:34] 2025-11-25 21:22:58,326 | INFO     | intersect: -5677932629.099084
[2025-11-25 22:23:34] 2025-11-25 21:22:58,328 | INFO     | chi2: 24.67687486898661
[2025-11-25 22:23:34] 2025-11-25 21:22:58,328 | INFO     | current chi2=24.67687486898661 (change=15.819618174872732 %)
[2025-11-25 22:23:34] 2025-11-25 21:22:58,328 | INFO     | left removable region: 10
[2025-11-25 22:23:34] 2025-11-25 21:22:58,331 | INFO     | sum of square deviations: 1011355697544.869
[2025-11-25 22:23:34] 2025-11-25 21:22:58,394 | INFO     | sum of deviations: 3386315125434.143
[2025-11-25 22:23:34] 2025-11-25 21:22:58,394 | INFO     | mean x: 1764060082.2353337
[2025-11-25 22:23:34] 2025-11-25 21:22:58,394 | INFO     | mean y: 2855040.4436952122
[2025-11-25 22:23:34] 2025-11-25 21:22:58,394 | INFO     | intersect: -5903734849.888224
[2025-11-25 22:23:34] 2025-11-25 21:22:58,396 | INFO     | chi2: 17.284183745884416
[2025-11-25 22:23:34] 2025-11-25 21:22:58,396 | INFO     | current memory leak: 3.35 B/s (using 1483 data points, chi2=17.28)
[2025-11-25 22:23:34] 2025-11-25 21:22:58,399 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-25 22:23:34] 2025-11-25 21:22:58,399 | INFO     | ..............................
[2025-11-25 22:23:34] 2025-11-25 21:22:58,399 | INFO     | . Timing measurements:
[2025-11-25 22:23:34] 2025-11-25 21:22:58,399 | INFO     | . get job = 0 s
[2025-11-25 22:23:34] 2025-11-25 21:22:58,399 | INFO     | . initial setup = 8 s
[2025-11-25 22:23:34] 2025-11-25 21:22:58,399 | INFO     | . payload setup = 183 s
[2025-11-25 22:23:34] 2025-11-25 21:22:58,400 | INFO     | . stage-in = 0 s
[2025-11-25 22:23:34] 2025-11-25 21:22:58,400 | INFO     | . payload execution = 91581 s
[2025-11-25 22:23:34] 2025-11-25 21:22:58,400 | INFO     | . stage-out = 5 s
[2025-11-25 22:23:34] 2025-11-25 21:22:58,400 | INFO     | . log creation = 2 s
[2025-11-25 22:23:34] 2025-11-25 21:22:58,400 | INFO     | ..............................
[2025-11-25 22:23:34] 2025-11-25 21:22:58,529 | INFO     | 
[2025-11-25 22:23:34] 2025-11-25 21:22:58,529 | INFO     | job summary report
[2025-11-25 22:23:34] 2025-11-25 21:22:58,529 | INFO     | --------------------------------------------------
[2025-11-25 22:23:34] 2025-11-25 21:22:58,529 | INFO     | PanDA job id: 6894274441
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | task id: 47533967
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | errors: (none)
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | pilot state: finished 
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | transexitcode: 0
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | exeerrorcode: 0
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | exeerrordiag: 
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | exitcode: 0
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | exitmsg: OK
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | cpuconsumptiontime: 348952 s
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | nevents: 1000
[2025-11-25 22:23:34] 2025-11-25 21:22:58,530 | INFO     | neventsw: 0
[2025-11-25 22:23:34] 2025-11-25 21:22:58,531 | INFO     | pid: 16133
[2025-11-25 22:23:34] 2025-11-25 21:22:58,531 | INFO     | pgrp: 16133
[2025-11-25 22:23:34] 2025-11-25 21:22:58,531 | INFO     | corecount: 8
[2025-11-25 22:23:34] 2025-11-25 21:22:58,531 | INFO     | event service: False
[2025-11-25 22:23:34] 2025-11-25 21:22:58,531 | INFO     | sizes: {0: 2283482, 1: 2284168, 2: 2284367, 13: 2284367, 24: 2284423, 34: 2284451, 45: 2284607, 56: 2284635, 67: 2284663, 77: 2284691, 88: 2284747, 99: 2285055, 10
[2025-11-25 22:23:34] 2025-11-25 21:22:58,531 | INFO     | --------------------------------------------------
[2025-11-25 22:23:34] 2025-11-25 21:22:58,531 | INFO     | 
[2025-11-25 22:23:34] 2025-11-25 21:22:58,531 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-25 22:23:34] 2025-11-25 21:22:58,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:23:34] 2025-11-25 21:22:58,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:23:34] 2025-11-25 21:22:58,790 | INFO     | job 6894274441 has completed (purged errors)
[2025-11-25 22:23:34] 2025-11-25 21:22:58,790 | INFO     | overall cleanup function is called
[2025-11-25 22:23:34] 2025-11-25 21:22:59,811 | INFO     | --- collectZombieJob: --- 10, [16133]
[2025-11-25 22:23:34] 2025-11-25 21:22:59,811 | INFO     | zombie collector waiting for pid 16133
[2025-11-25 22:23:34] 2025-11-25 21:22:59,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:23:34] 2025-11-25 21:22:59,812 | INFO     | collected zombie processes
[2025-11-25 22:23:34] 2025-11-25 21:22:59,812 | INFO     | will attempt to kill all subprocesses of pid=16133
[2025-11-25 22:23:34] 2025-11-25 21:22:59,927 | INFO     | process IDs to be killed: [16133] (in reverse order)
[2025-11-25 22:23:34] 2025-11-25 21:23:00,619 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:23:34] 2025-11-25 21:23:00,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:23:34] 2025-11-25 21:23:00,623 | INFO     | did not find any defunct processes belonging to 16133
[2025-11-25 22:23:34] 2025-11-25 21:23:00,626 | INFO     | did not find any defunct processes belonging to 16133
[2025-11-25 22:23:34] 2025-11-25 21:23:00,684 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:23:34] 2025-11-25 21:23:00,685 | INFO     | ready for new job
[2025-11-25 22:23:34] 2025-11-25 21:23:00,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:23:34] 2025-11-25 21:23:00,691 | INFO     | ***************************************
[2025-11-25 22:23:34] 2025-11-25 21:23:00,692 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:23:34] 2025-11-25 21:23:00,692 | INFO     | ***************************************
[2025-11-25 22:23:34] 2025-11-25 21:23:00,692 | INFO     | 
[2025-11-25 22:23:34] 2025-11-25 21:23:00,692 | INFO     | pilot is running in a VM
[2025-11-25 22:23:34] 2025-11-25 21:23:00,692 | INFO     | architecture information:
[2025-11-25 22:23:34] 2025-11-25 21:23:00,707 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:23:34] 2025-11-25 21:23:00,880 | INFO     | cat /etc/os-release:
[2025-11-25 22:23:34] NAME="CentOS Linux"
[2025-11-25 22:23:34] VERSION="7 (Core)"
[2025-11-25 22:23:34] ID="centos"
[2025-11-25 22:23:34] ID_LIKE="rhel fedora"
[2025-11-25 22:23:34] VERSION_ID="7"
[2025-11-25 22:23:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:23:34] ANSI_COLOR="0;31"
[2025-11-25 22:23:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:23:34] HOME_URL="https://www.centos.org/"
[2025-11-25 22:23:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:23:34] 
[2025-11-25 22:23:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:23:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:23:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:23:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:23:34] 
[2025-11-25 22:23:34] 2025-11-25 21:23:00,880 | INFO     | ***************************************
[2025-11-25 22:23:34] 2025-11-25 21:23:01,383 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-25 22:23:34] 2025-11-25 21:23:01,571 | INFO     | sufficient remaining disk space (494723399680 B)
[2025-11-25 22:23:34] 2025-11-25 21:23:01,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:23:34] 2025-11-25 21:23:01,571 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:23:34] 2025-11-25 21:23:01,572 | INFO     | update_server=False
[2025-11-25 22:23:34] 2025-11-25 21:23:01,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:23:34] 2025-11-25 21:23:01,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:23:34] 2025-11-25 21:23:01,574 | INFO     | aborting loop
[2025-11-25 22:23:34] 2025-11-25 21:23:01,576 | INFO     | all data control threads have been joined
[2025-11-25 22:23:34] 2025-11-25 21:23:01,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:23:34] 2025-11-25 21:23:02,089 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:23:34] 2025-11-25 21:23:02,510 | INFO     | all job control threads have been joined
[2025-11-25 22:23:34] 2025-11-25 21:23:02,578 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:02,579 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:02,581 | INFO     | [data] control thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:02,585 | INFO     | [job] validate thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:02,715 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:02,731 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:02,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:23:34] 2025-11-25 21:23:02,927 | INFO     | all payload control threads have been joined
[2025-11-25 22:23:34] 2025-11-25 21:23:03,088 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:03,096 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:03,516 | INFO     | [job] control thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:03,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:23:34] 2025-11-25 21:23:03,587 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:03,845 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:03,861 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:03,933 | INFO     | [payload] control thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:03,963 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:04,549 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:06,814 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:23:34] 2025-11-25 21:23:07,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673670141760)>', '<ExcThread(monitor, started 140673214813952)>']
[2025-11-25 22:23:34] 2025-11-25 21:23:12,165 | INFO     | all workflow threads have been joined
[2025-11-25 22:23:34] 2025-11-25 21:23:12,165 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:23:34] 2025-11-25 21:23:12,166 | INFO     | traces error code: 0
[2025-11-25 22:23:34] 2025-11-25 21:23:12,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:23:34] 2025-11-25 21:23:30,372 | INFO     | PID=9643 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 22:23:34] 2025-11-25 21:23:30,372 | INFO     | .. there are 9 such processes running
[2025-11-25 22:23:34] 2025-11-25 21:23:30,374 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:23:34] 2025-11-25 21:23:30,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:23:34] 2025-11-25 21:23:30,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:23:34] 2025-11-25 21:23:30,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:23:34] 2025-11-25 21:23:30,374 | INFO     | [monitor] control thread has ended
[2025-11-25 22:23:34] 2025-11-25 21:23:30,729 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:23:34] 2025-11-25 21:23:30,822 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:23:34] 2025-11-25 21:23:30,944 [wrapper] pilotpid: 9643
[2025-11-25 22:23:34] 2025-11-25 21:23:31,020 [wrapper] Pilot exit status: 0
[2025-11-25 22:23:34] 2025-11-25 21:23:31,266 [wrapper] pandaids: 6894274441
[2025-11-25 22:23:34] 2025-11-25 21:23:32,071 [wrapper] cleanup supervisor_pilot 16462 9644
[2025-11-25 22:23:34] 2025-11-25 21:23:32,143 [wrapper] Test setup, not cleaning
[2025-11-25 22:23:34] 2025-11-25 21:23:32,257 [wrapper] apfmon messages muted
[2025-11-25 22:23:34] 2025-11-25 21:23:32,364 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:23:34] 2025-11-25 21:23:32,463 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:23:34]  *** Error codes and diagnostics ***
[2025-11-25 22:23:34]     "exeErrorCode": 0,
[2025-11-25 22:23:34]     "exeErrorDiag": "",
[2025-11-25 22:23:34]     "pilotErrorCode": 0,
[2025-11-25 22:23:34]     "pilotErrorDiag": "",
[2025-11-25 22:23:34]  *** Listing of results directory ***
[2025-11-25 22:23:34] total 1341764
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc    576529 Nov 21 08:07 pilot3.tar.gz
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc      5112 Nov 21 08:31 queuedata.json
[2025-11-25 22:23:34] -rwx------. 1 boinc boinc     36292 Nov 21 08:31 runpilot2-wrapper.sh
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc       100 Nov 24 20:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:23:34] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 20:43 run_atlas
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc       105 Nov 24 20:43 job.xml
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc      6392 Nov 24 20:43 init_data.xml
[2025-11-25 22:23:34] -rw-r--r--. 2 boinc boinc 409971077 Nov 24 20:43 EVNT.47493127._002306.pool.root.1
[2025-11-25 22:23:34] -rw-r--r--. 2 boinc boinc     15847 Nov 24 20:43 start_atlas.sh
[2025-11-25 22:23:34] drwxrwx--x. 2 boinc boinc        68 Nov 24 20:43 shared
[2025-11-25 22:23:34] -rw-r--r--. 2 boinc boinc    590101 Nov 24 20:43 input.tar.gz
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc         0 Nov 24 20:43 boinc_lockfile
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc      2786 Nov 24 20:44 pandaJob.out
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc    991801 Nov 24 20:48 agis_schedconf.cvmfs.json
[2025-11-25 22:23:34] drwx------. 5 boinc boinc      4096 Nov 24 20:48 pilot3
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc       533 Nov 25 21:54 boinc_task_state.xml
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc 930358363 Nov 25 22:20 HITS.47533967._002779.pool.root.1
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc      1033 Nov 25 22:21 memory_monitor_summary.json
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc   1516240 Nov 25 22:21 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc   2576332 Nov 25 22:21 log.47533967._002779.job.log.tgz.1
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc      8630 Nov 25 22:22 heartbeat.json
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc      8192 Nov 25 22:23 boinc_mmap_file
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc        29 Nov 25 22:23 wrapper_checkpoint.txt
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc        95 Nov 25 22:23 pilot_heartbeat.json
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc       819 Nov 25 22:23 pilotlog.txt
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc  12291855 Nov 25 22:23 log.47533967._002779.job.log.1
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc       353 Nov 25 22:23 output.list
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc       620 Nov 25 22:23 runtime_log
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc  14888960 Nov 25 22:23 result.tar.gz
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc      8833 Nov 25 22:23 runtime_log.err
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc       662 Nov 25 22:23 qEaKDmYnag8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNCJKDmspPfDm.diag
[2025-11-25 22:23:34] -rw-r--r--. 1 boinc boinc     21444 Nov 25 22:23 stderr.txt
[2025-11-25 22:23:34] HITS file was successfully produced:
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc 930358363 Nov 25 22:20 shared/HITS.pool.root.1
[2025-11-25 22:23:34]  *** Contents of shared directory: ***
[2025-11-25 22:23:34] total 1324056
[2025-11-25 22:23:34] -rw-r--r--. 2 boinc boinc 409971077 Nov 24 20:43 ATLAS.root_0
[2025-11-25 22:23:34] -rw-r--r--. 2 boinc boinc     15847 Nov 24 20:43 start_atlas.sh
[2025-11-25 22:23:34] -rw-r--r--. 2 boinc boinc    590101 Nov 24 20:43 input.tar.gz
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc 930358363 Nov 25 22:20 HITS.pool.root.1
[2025-11-25 22:23:34] -rw-------. 1 boinc boinc  14888960 Nov 25 22:23 result.tar.gz
22:23:36 (5922): run_atlas exited; CPU time 349407.444110
22:23:36 (5922): called boinc_finish(0)

</stderr_txt>
]]>

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