Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:22:43 (26071): wrapper (7.7.26015): starting
11:22:43 (26071): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 11:22:43] Arguments: --nthreads 8
[2025-11-24 11:22:43] Threads: 8
[2025-11-24 11:22:43] Checking for CVMFS
[2025-11-24 11:22:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 11:22:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 11:22:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 11:22:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 11:22:44] 2.11.2.0 28532 282298 138248 153242 2 84 18962975 25165825 930 130560 16 125573049 99.874 76431331 2980 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 11:22:44] CVMFS is ok
[2025-11-24 11:22:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 11:22:44] Checking for apptainer binary...
[2025-11-24 11:22:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 11:22:44] Running /usr/bin/apptainer --version
[2025-11-24 11:22:44] apptainer version 1.3.2-1.el7
[2025-11-24 11:22:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 11:22:46] cg-vwn472.simple-grid.lan
[2025-11-24 11:22:46] apptainer works
[2025-11-24 11:22:46] Set ATHENA_PROC_NUMBER=8
[2025-11-24 11:22:46] Set ATHENA_CORE_NUMBER=8
[2025-11-24 11:22:46] Starting ATLAS job with PandaID=6894241935
[2025-11-24 11:22:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 09:55:45]  *** The last 200 lines of the pilot log: ***
[2025-11-25 09:55:46] 2025-11-25 08:54:58,879 | INFO     | monitor loop #5432: job 0:6894241935 is in state 'finished'
[2025-11-25 09:55:46] 2025-11-25 08:54:58,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 09:55:46] 2025-11-25 08:54:59,973 | INFO     | time since job start (81107s) is within the limit (172800.0s)
[2025-11-25 09:55:46] 2025-11-25 08:55:01,383 | INFO     | monitor loop #5433: job 0:6894241935 is in state 'finished'
[2025-11-25 09:55:46] 2025-11-25 08:55:01,384 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 09:55:46] 2025-11-25 08:55:01,980 | INFO     | time since job start (81109s) is within the limit (172800.0s)
[2025-11-25 09:55:46] 2025-11-25 08:55:03,888 | INFO     | monitor loop #5434: job 0:6894241935 is in state 'finished'
[2025-11-25 09:55:46] 2025-11-25 08:55:03,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 09:55:46] 2025-11-25 08:55:03,994 | INFO     | time since job start (81111s) is within the limit (172800.0s)
[2025-11-25 09:55:46] 2025-11-25 08:55:03,995 | INFO     | 81122s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-25 09:55:46] 2025-11-25 08:55:06,001 | INFO     | time since job start (81114s) is within the limit (172800.0s)
[2025-11-25 09:55:46] 2025-11-25 08:55:06,395 | INFO     | monitor loop #5435: job 0:6894241935 is in state 'finished'
[2025-11-25 09:55:46] 2025-11-25 08:55:06,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 09:55:46] 2025-11-25 08:55:08,008 | INFO     | time since job start (81116s) is within the limit (172800.0s)
[2025-11-25 09:55:46] 2025-11-25 08:55:08,904 | INFO     | monitor loop #5436: job 0:6894241935 is in state 'finished'
[2025-11-25 09:55:46] 2025-11-25 08:55:08,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 09:55:46] 2025-11-25 08:55:09,220 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 09:55:46] 2025-11-25 08:55:09,222 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-25 09:55:46] 2025-11-25 08:55:09,224 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6894241935/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 09:55:46] 2025-11-25 08:55:09,225 | INFO     | extracted standard info from prmon json
[2025-11-25 09:55:46] 2025-11-25 08:55:09,225 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 09:55:46] 2025-11-25 08:55:09,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 09:55:46] 2025-11-25 08:55:09,255 | INFO     | fitting pss+swap vs Time
[2025-11-25 09:55:46] 2025-11-25 08:55:09,257 | INFO     | sum of square deviations: 726225605921.4171
[2025-11-25 09:55:46] 2025-11-25 08:55:09,310 | INFO     | sum of deviations: 1082095038976.987
[2025-11-25 09:55:46] 2025-11-25 08:55:09,310 | INFO     | mean x: 1764020299.558735
[2025-11-25 09:55:46] 2025-11-25 08:55:09,310 | INFO     | mean y: 2847373.3975903615
[2025-11-25 09:55:46] 2025-11-25 08:55:09,310 | INFO     | intersect: -2625588747.889155
[2025-11-25 09:55:46] 2025-11-25 08:55:09,312 | INFO     | chi2: 19.76942874645761
[2025-11-25 09:55:46] 2025-11-25 08:55:09,314 | INFO     | sum of square deviations: 718054011755.7927
[2025-11-25 09:55:46] 2025-11-25 08:55:09,361 | INFO     | sum of deviations: 1515031034501.124
[2025-11-25 09:55:46] 2025-11-25 08:55:09,362 | INFO     | mean x: 1764020147.0627363
[2025-11-25 09:55:46] 2025-11-25 08:55:09,362 | INFO     | mean y: 2855451.6009070296
[2025-11-25 09:55:46] 2025-11-25 08:55:09,362 | INFO     | intersect: -3719072459.8529243
[2025-11-25 09:55:46] 2025-11-25 08:55:09,363 | INFO     | chi2: 16.558212770389968
[2025-11-25 09:55:46] 2025-11-25 08:55:09,363 | INFO     | current chi2=16.558212770389968 (change=16.243342269781287 %)
[2025-11-25 09:55:46] 2025-11-25 08:55:09,364 | INFO     | right removable region: 1322
[2025-11-25 09:55:46] 2025-11-25 08:55:09,365 | INFO     | sum of square deviations: 718053154095.7933
[2025-11-25 09:55:46] 2025-11-25 08:55:09,409 | INFO     | sum of deviations: 653822318627.374
[2025-11-25 09:55:46] 2025-11-25 08:55:09,409 | INFO     | mean x: 1764020452.0627363
[2025-11-25 09:55:46] 2025-11-25 08:55:09,409 | INFO     | mean y: 2855361.4051398337
[2025-11-25 09:55:46] 2025-11-25 08:55:09,410 | INFO     | intersect: -1603371051.6326628
[2025-11-25 09:55:46] 2025-11-25 08:55:09,411 | INFO     | chi2: 17.023512053115933
[2025-11-25 09:55:46] 2025-11-25 08:55:09,411 | INFO     | current chi2=17.023512053115933 (change=13.889711880692074 %)
[2025-11-25 09:55:46] 2025-11-25 08:55:09,411 | INFO     | left removable region: 10
[2025-11-25 09:55:46] 2025-11-25 08:55:09,413 | INFO     | sum of square deviations: 700291149257.4089
[2025-11-25 09:55:46] 2025-11-25 08:55:09,458 | INFO     | sum of deviations: 1079879445923.1698
[2025-11-25 09:55:46] 2025-11-25 08:55:09,458 | INFO     | mean x: 1764020421.5708842
[2025-11-25 09:55:46] 2025-11-25 08:55:09,458 | INFO     | mean y: 2867221.43902439
[2025-11-25 09:55:46] 2025-11-25 08:55:09,458 | INFO     | intersect: -2717329081.860134
[2025-11-25 09:55:46] 2025-11-25 08:55:09,460 | INFO     | chi2: 12.91090336528652
[2025-11-25 09:55:46] 2025-11-25 08:55:09,460 | INFO     | current memory leak: 1.54 B/s (using 1312 data points, chi2=12.91)
[2025-11-25 09:55:46] 2025-11-25 08:55:09,462 | INFO     | could have reported an average CPU frequency of 2249 MHz (45 samples)
[2025-11-25 09:55:46] 2025-11-25 08:55:09,462 | INFO     | ..............................
[2025-11-25 09:55:46] 2025-11-25 08:55:09,462 | INFO     | . Timing measurements:
[2025-11-25 09:55:46] 2025-11-25 08:55:09,462 | INFO     | . get job = 0 s
[2025-11-25 09:55:46] 2025-11-25 08:55:09,462 | INFO     | . initial setup = 11 s
[2025-11-25 09:55:46] 2025-11-25 08:55:09,462 | INFO     | . payload setup = 8 s
[2025-11-25 09:55:46] 2025-11-25 08:55:09,462 | INFO     | . stage-in = 0 s
[2025-11-25 09:55:46] 2025-11-25 08:55:09,463 | INFO     | . payload execution = 80982 s
[2025-11-25 09:55:46] 2025-11-25 08:55:09,463 | INFO     | . stage-out = 5 s
[2025-11-25 09:55:46] 2025-11-25 08:55:09,463 | INFO     | . log creation = 2 s
[2025-11-25 09:55:46] 2025-11-25 08:55:09,463 | INFO     | ..............................
[2025-11-25 09:55:46] 2025-11-25 08:55:09,570 | INFO     | 
[2025-11-25 09:55:46] 2025-11-25 08:55:09,570 | INFO     | job summary report
[2025-11-25 09:55:46] 2025-11-25 08:55:09,570 | INFO     | --------------------------------------------------
[2025-11-25 09:55:46] 2025-11-25 08:55:09,570 | INFO     | PanDA job id: 6894241935
[2025-11-25 09:55:46] 2025-11-25 08:55:09,570 | INFO     | task id: 47533967
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | errors: (none)
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | pilot state: finished 
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | transexitcode: 0
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | exeerrorcode: 0
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | exeerrordiag: 
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | exitcode: 0
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | exitmsg: OK
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | cpuconsumptiontime: 311568 s
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | nevents: 1000
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | neventsw: 0
[2025-11-25 09:55:46] 2025-11-25 08:55:09,571 | INFO     | pid: 3847
[2025-11-25 09:55:46] 2025-11-25 08:55:09,572 | INFO     | pgrp: 3847
[2025-11-25 09:55:46] 2025-11-25 08:55:09,572 | INFO     | corecount: 8
[2025-11-25 09:55:46] 2025-11-25 08:55:09,572 | INFO     | event service: False
[2025-11-25 09:55:46] 2025-11-25 08:55:09,572 | INFO     | sizes: {0: 2298634, 1: 2298833, 6: 2299095, 12: 2299123, 80995: 2357169, 81000: 2366959, 81002: 2367143, 81100: 2367389}
[2025-11-25 09:55:46] 2025-11-25 08:55:09,572 | INFO     | --------------------------------------------------
[2025-11-25 09:55:46] 2025-11-25 08:55:09,572 | INFO     | 
[2025-11-25 09:55:46] 2025-11-25 08:55:09,573 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-25 09:55:46] 2025-11-25 08:55:09,985 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,985 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,987 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,987 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,987 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 09:55:46] 2025-11-25 08:55:09,987 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,987 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 09:55:46] 2025-11-25 08:55:09,987 | INFO     | job 6894241935 has completed (purged errors)
[2025-11-25 09:55:46] 2025-11-25 08:55:09,987 | INFO     | overall cleanup function is called
[2025-11-25 09:55:46] 2025-11-25 08:55:11,002 | INFO     | --- collectZombieJob: --- 10, [3847]
[2025-11-25 09:55:46] 2025-11-25 08:55:11,002 | INFO     | zombie collector waiting for pid 3847
[2025-11-25 09:55:46] 2025-11-25 08:55:11,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 09:55:46] 2025-11-25 08:55:11,003 | INFO     | collected zombie processes
[2025-11-25 09:55:46] 2025-11-25 08:55:11,003 | INFO     | will attempt to kill all subprocesses of pid=3847
[2025-11-25 09:55:46] 2025-11-25 08:55:11,098 | INFO     | process IDs to be killed: [3847] (in reverse order)
[2025-11-25 09:55:46] 2025-11-25 08:55:11,901 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 09:55:46] 2025-11-25 08:55:11,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 09:55:46] 2025-11-25 08:55:11,904 | INFO     | did not find any defunct processes belonging to 3847
[2025-11-25 09:55:46] 2025-11-25 08:55:11,907 | INFO     | did not find any defunct processes belonging to 3847
[2025-11-25 09:55:46] 2025-11-25 08:55:11,957 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 09:55:46] 2025-11-25 08:55:11,958 | INFO     | ready for new job
[2025-11-25 09:55:46] 2025-11-25 08:55:11,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 09:55:46] 2025-11-25 08:55:11,963 | INFO     | ***************************************
[2025-11-25 09:55:46] 2025-11-25 08:55:11,964 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 09:55:46] 2025-11-25 08:55:11,964 | INFO     | ***************************************
[2025-11-25 09:55:46] 2025-11-25 08:55:11,964 | INFO     | 
[2025-11-25 09:55:46] 2025-11-25 08:55:11,964 | INFO     | pilot is running in a VM
[2025-11-25 09:55:46] 2025-11-25 08:55:11,964 | INFO     | architecture information:
[2025-11-25 09:55:46] 2025-11-25 08:55:11,979 | INFO     | executing command: cat /etc/os-release
[2025-11-25 09:55:46] 2025-11-25 08:55:12,195 | INFO     | cat /etc/os-release:
[2025-11-25 09:55:46] NAME="CentOS Linux"
[2025-11-25 09:55:46] VERSION="7 (Core)"
[2025-11-25 09:55:46] ID="centos"
[2025-11-25 09:55:46] ID_LIKE="rhel fedora"
[2025-11-25 09:55:46] VERSION_ID="7"
[2025-11-25 09:55:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 09:55:46] ANSI_COLOR="0;31"
[2025-11-25 09:55:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 09:55:46] HOME_URL="https://www.centos.org/"
[2025-11-25 09:55:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 09:55:46] 
[2025-11-25 09:55:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 09:55:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 09:55:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 09:55:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 09:55:46] 
[2025-11-25 09:55:46] 2025-11-25 08:55:12,195 | INFO     | ***************************************
[2025-11-25 09:55:46] 2025-11-25 08:55:12,698 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-25 09:55:46] 2025-11-25 08:55:12,845 | INFO     | sufficient remaining disk space (495215181824 B)
[2025-11-25 09:55:46] 2025-11-25 08:55:12,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 09:55:46] 2025-11-25 08:55:12,846 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 09:55:46] 2025-11-25 08:55:12,846 | INFO     | update_server=False
[2025-11-25 09:55:46] 2025-11-25 08:55:12,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 09:55:46] 2025-11-25 08:55:12,846 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 09:55:46] 2025-11-25 08:55:12,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:55:46] 2025-11-25 08:55:12,847 | INFO     | aborting loop
[2025-11-25 09:55:46] 2025-11-25 08:55:13,260 | INFO     | all job control threads have been joined
[2025-11-25 09:55:46] 2025-11-25 08:55:13,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 09:55:46] 2025-11-25 08:55:13,540 | INFO     | all payload control threads have been joined
[2025-11-25 09:55:46] 2025-11-25 08:55:13,752 | INFO     | all data control threads have been joined
[2025-11-25 09:55:46] 2025-11-25 08:55:13,852 | INFO     | [job] retrieve thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:13,853 | INFO     | [job] job monitor thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,036 | INFO     | [payload] failed_post thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,183 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,266 | INFO     | [job] control thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,546 | INFO     | [payload] control thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,548 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:55:46] 2025-11-25 08:55:14,618 | INFO     | [job] validate thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,658 | INFO     | [payload] validate_post thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,677 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,758 | INFO     | [data] control thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:14,948 | INFO     | [data] copytool_in thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:15,138 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:15,370 | INFO     | [data] copytool_out thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:15,590 | INFO     | [job] queue monitor thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:16,855 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 09:55:46] 2025-11-25 08:55:33,968 | INFO     | [monitor] cgroup control has ended
[2025-11-25 09:55:46] 2025-11-25 08:55:35,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000687949632)>', '<ExcThread(monitor, started 140000389736192)>']
[2025-11-25 09:55:46] 2025-11-25 08:55:40,079 | INFO     | all workflow threads have been joined
[2025-11-25 09:55:46] 2025-11-25 08:55:40,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 09:55:46] 2025-11-25 08:55:40,080 | INFO     | traces error code: 0
[2025-11-25 09:55:46] 2025-11-25 08:55:40,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 09:55:46] 2025-11-25 08:55:41,169 | INFO     | PID=29809 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 09:55:46] 2025-11-25 08:55:41,169 | INFO     | .. there are 9 such processes running
[2025-11-25 09:55:46] 2025-11-25 08:55:41,171 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 09:55:46] 2025-11-25 08:55:41,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 09:55:46] 2025-11-25 08:55:41,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 09:55:46] 2025-11-25 08:55:41,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 09:55:46] 2025-11-25 08:55:41,171 | INFO     | [monitor] control thread has ended
[2025-11-25 09:55:46] 2025-11-25 08:55:41,643 [wrapper] ==== pilot stdout END ====
[2025-11-25 09:55:46] 2025-11-25 08:55:41,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 09:55:46] 2025-11-25 08:55:41,850 [wrapper] pilotpid: 29809
[2025-11-25 09:55:46] 2025-11-25 08:55:41,942 [wrapper] Pilot exit status: 0
[2025-11-25 09:55:46] 2025-11-25 08:55:42,333 [wrapper] pandaids: 6894241935
[2025-11-25 09:55:46] 2025-11-25 08:55:43,034 [wrapper] cleanup supervisor_pilot 16184 29810
[2025-11-25 09:55:46] 2025-11-25 08:55:43,132 [wrapper] Test setup, not cleaning
[2025-11-25 09:55:46] 2025-11-25 08:55:43,191 [wrapper] apfmon messages muted
[2025-11-25 09:55:46] 2025-11-25 08:55:43,288 [wrapper] ==== wrapper stdout END ====
[2025-11-25 09:55:46] 2025-11-25 08:55:43,382 [wrapper] ==== wrapper stderr END ====
[2025-11-25 09:55:46]  *** Error codes and diagnostics ***
[2025-11-25 09:55:46]     "exeErrorCode": 0,
[2025-11-25 09:55:46]     "exeErrorDiag": "",
[2025-11-25 09:55:46]     "pilotErrorCode": 0,
[2025-11-25 09:55:46]     "pilotErrorDiag": "",
[2025-11-25 09:55:46]  *** Listing of results directory ***
[2025-11-25 09:55:46] total 1325484
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc    576529 Nov 21 01:06 pilot3.tar.gz
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc      5112 Nov 21 01:47 queuedata.json
[2025-11-25 09:55:46] -rwx------. 1 boinc boinc     36292 Nov 21 01:47 runpilot2-wrapper.sh
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc       100 Nov 24 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 09:55:46] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 11:22 run_atlas
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc       105 Nov 24 11:22 job.xml
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc      6392 Nov 24 11:22 init_data.xml
[2025-11-25 09:55:46] -rw-r--r--. 2 boinc boinc 408890712 Nov 24 11:22 EVNT.47493127._002059.pool.root.1
[2025-11-25 09:55:46] -rw-r--r--. 2 boinc boinc     15847 Nov 24 11:22 start_atlas.sh
[2025-11-25 09:55:46] drwxrwx--x. 2 boinc boinc        68 Nov 24 11:22 shared
[2025-11-25 09:55:46] -rw-r--r--. 2 boinc boinc    590103 Nov 24 11:22 input.tar.gz
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc         0 Nov 24 11:22 boinc_lockfile
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc      2785 Nov 24 11:22 pandaJob.out
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc    989824 Nov 24 11:23 agis_schedconf.cvmfs.json
[2025-11-25 09:55:46] drwx------. 5 boinc boinc      4096 Nov 24 11:23 pilot3
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc       533 Nov 25 09:24 boinc_task_state.xml
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc 918035785 Nov 25 09:52 HITS.47533967._000310.pool.root.1
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc      1034 Nov 25 09:53 memory_monitor_summary.json
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc   1516240 Nov 25 09:53 agis_ddmendpoints.agis.ALL.json
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc   2423866 Nov 25 09:53 log.47533967._000310.job.log.tgz.1
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc      7943 Nov 25 09:55 heartbeat.json
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc        29 Nov 25 09:55 wrapper_checkpoint.txt
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc      8192 Nov 25 09:55 boinc_mmap_file
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc        95 Nov 25 09:55 pilot_heartbeat.json
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc       820 Nov 25 09:55 pilotlog.txt
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc  10813004 Nov 25 09:55 log.47533967._000310.job.log.1
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc       353 Nov 25 09:55 output.list
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc       620 Nov 25 09:55 runtime_log
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc  13260800 Nov 25 09:55 result.tar.gz
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc       662 Nov 25 09:55 yheMDm9TUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTlIKDmMbDW8n.diag
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc      8817 Nov 25 09:55 runtime_log.err
[2025-11-25 09:55:46] -rw-r--r--. 1 boinc boinc     21407 Nov 25 09:55 stderr.txt
[2025-11-25 09:55:46] HITS file was successfully produced:
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc 918035785 Nov 25 09:52 shared/HITS.pool.root.1
[2025-11-25 09:55:46]  *** Contents of shared directory: ***
[2025-11-25 09:55:46] total 1309376
[2025-11-25 09:55:46] -rw-r--r--. 2 boinc boinc 408890712 Nov 24 11:22 ATLAS.root_0
[2025-11-25 09:55:46] -rw-r--r--. 2 boinc boinc     15847 Nov 24 11:22 start_atlas.sh
[2025-11-25 09:55:46] -rw-r--r--. 2 boinc boinc    590103 Nov 24 11:22 input.tar.gz
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc 918035785 Nov 25 09:52 HITS.pool.root.1
[2025-11-25 09:55:46] -rw-------. 1 boinc boinc  13260800 Nov 25 09:55 result.tar.gz
09:55:48 (26071): run_atlas exited; CPU time 311865.949392
09:55:48 (26071): called boinc_finish(0)

</stderr_txt>
]]>

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