Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
05:07:05 (2522759): wrapper (7.7.26015): starting
05:07:05 (2522759): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 05:07:05] Arguments: --nthreads 8
[2025-11-24 05:07:05] Threads: 8
[2025-11-24 05:07:05] Checking for CVMFS
[2025-11-24 05:07:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:07:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:07:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:07:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:07:06] 2.13.3.0 4524 4864 73932 153246 2 83 3027364 4096001 12222 130560 0 699465320 99.998 1134897 712 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-24 05:07:06] CVMFS is ok
[2025-11-24 05:07:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 05:07:06] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 05:07:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 05:07:06] Further information can be found at the LHC@home message board.
[2025-11-24 05:07:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:07:06] Checking for apptainer binary...
[2025-11-24 05:07:06] apptainer is not installed, using version from CVMFS
[2025-11-24 05:07:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:07:06] 7950x-linux
[2025-11-24 05:07:06] apptainer works
[2025-11-24 05:07:06] Set ATHENA_PROC_NUMBER=8
[2025-11-24 05:07:06] Set ATHENA_CORE_NUMBER=8
[2025-11-24 05:07:06] Starting ATLAS job with PandaID=6894246220
[2025-11-24 05:07:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc505/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:28:23]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:28:23] 2025-11-25 05:27:50,145 | INFO     | monitor loop #4282: job 0:6894246220 is in state 'finished'
[2025-11-24 21:28:23] 2025-11-25 05:27:50,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 21:28:23] 2025-11-25 05:27:50,220 | INFO     | time since job start (58828s) is within the limit (172800.0s)
[2025-11-24 21:28:23] 2025-11-25 05:27:51,636 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 21:28:23] 2025-11-25 05:27:51,639 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.8676874999996
[2025-11-24 21:28:23] 2025-11-25 05:27:51,643 | INFO     | using path: /var/lib/multiboinc/boinc505/slots/0/PanDA_Pilot-6894246220/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 21:28:23] 2025-11-25 05:27:51,643 | INFO     | extracted standard info from prmon json
[2025-11-24 21:28:23] 2025-11-25 05:27:51,643 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 21:28:23] 2025-11-25 05:27:51,643 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 21:28:23] 2025-11-25 05:27:51,652 | INFO     | fitting pss+swap vs Time
[2025-11-24 21:28:23] 2025-11-25 05:27:51,653 | INFO     | sum of square deviations: 277785087728.8506
[2025-11-24 21:28:23] 2025-11-25 05:27:51,665 | INFO     | sum of deviations: 1719188099878.2454
[2025-11-24 21:28:23] 2025-11-25 05:27:51,665 | INFO     | mean x: 1764019042.512448
[2025-11-24 21:28:23] 2025-11-25 05:27:51,665 | INFO     | mean y: 2868039.270746888
[2025-11-24 21:28:23] 2025-11-25 05:27:51,665 | INFO     | intersect: -10914494626.381968
[2025-11-24 21:28:23] 2025-11-25 05:27:51,666 | INFO     | chi2: 4.3094398610175855
[2025-11-24 21:28:23] 2025-11-25 05:27:51,668 | INFO     | sum of square deviations: 273485085183.8499
[2025-11-24 21:28:23] 2025-11-25 05:27:51,678 | INFO     | sum of deviations: 1942622683183.3425
[2025-11-24 21:28:23] 2025-11-25 05:27:51,678 | INFO     | mean x: 1764018890.012513
[2025-11-24 21:28:23] 2025-11-25 05:27:51,678 | INFO     | mean y: 2875954.5547445253
[2025-11-24 21:28:23] 2025-11-25 05:27:51,678 | INFO     | intersect: -12527325123.864332
[2025-11-24 21:28:23] 2025-11-25 05:27:51,679 | INFO     | chi2: 2.502614560977731
[2025-11-24 21:28:23] 2025-11-25 05:27:51,679 | INFO     | current chi2=2.502614560977731 (change=41.92714966007694 %)
[2025-11-24 21:28:23] 2025-11-25 05:27:51,679 | INFO     | sum of square deviations: 269229688126.34912
[2025-11-24 21:28:23] 2025-11-25 05:27:51,690 | INFO     | sum of deviations: 1949043380294.1326
[2025-11-24 21:28:23] 2025-11-25 05:27:51,690 | INFO     | mean x: 1764018737.5125787
[2025-11-24 21:28:23] 2025-11-25 05:27:51,690 | INFO     | mean y: 2876182.363731656
[2025-11-24 21:28:23] 2025-11-25 05:27:51,690 | INFO     | intersect: -12767442971.481539
[2025-11-24 21:28:23] 2025-11-25 05:27:51,690 | INFO     | chi2: 2.4578390094713543
[2025-11-24 21:28:23] 2025-11-25 05:27:51,690 | INFO     | current chi2=2.4578390094713543 (change=1.7891509225808826 %)
[2025-11-24 21:28:23] 2025-11-25 05:27:51,690 | INFO     | right removable region: 953
[2025-11-24 21:28:23] 2025-11-25 05:27:51,691 | INFO     | sum of square deviations: 273485077863.84988
[2025-11-24 21:28:23] 2025-11-25 05:27:51,701 | INFO     | sum of deviations: 1457880280229.7205
[2025-11-24 21:28:23] 2025-11-25 05:27:51,701 | INFO     | mean x: 1764019195.012513
[2025-11-24 21:28:23] 2025-11-25 05:27:51,701 | INFO     | mean y: 2877295.189781022
[2025-11-24 21:28:23] 2025-11-25 05:27:51,701 | INFO     | intersect: -9400666102.654184
[2025-11-24 21:28:23] 2025-11-25 05:27:51,702 | INFO     | chi2: 2.1217873458749095
[2025-11-24 21:28:23] 2025-11-25 05:27:51,702 | INFO     | current chi2=2.1217873458749095 (change=50.7641964082568 %)
[2025-11-24 21:28:23] 2025-11-25 05:27:51,702 | INFO     | sum of square deviations: 269229673486.34915
[2025-11-24 21:28:23] 2025-11-25 05:27:51,712 | INFO     | sum of deviations: 1399914797542.6038
[2025-11-24 21:28:23] 2025-11-25 05:27:51,712 | INFO     | mean x: 1764019347.5125787
[2025-11-24 21:28:23] 2025-11-25 05:27:51,713 | INFO     | mean y: 2879371.9496855345
[2025-11-24 21:28:23] 2025-11-25 05:27:51,713 | INFO     | intersect: -9169500313.232075
[2025-11-24 21:28:23] 2025-11-25 05:27:51,713 | INFO     | chi2: 2.084896916582026
[2025-11-24 21:28:23] 2025-11-25 05:27:51,713 | INFO     | current chi2=2.084896916582026 (change=1.7386487559464612 %)
[2025-11-24 21:28:23] 2025-11-25 05:27:51,713 | INFO     | left removable region: 20
[2025-11-24 21:28:23] 2025-11-25 05:27:51,714 | INFO     | sum of square deviations: 251838834657.8457
[2025-11-24 21:28:23] 2025-11-25 05:27:51,723 | INFO     | sum of deviations: 1514206049969.4514
[2025-11-24 21:28:23] 2025-11-25 05:27:51,723 | INFO     | mean x: 1764019317.0128617
[2025-11-24 21:28:23] 2025-11-25 05:27:51,723 | INFO     | mean y: 2891800.878885316
[2025-11-24 21:28:23] 2025-11-25 05:27:51,724 | INFO     | intersect: -10603449852.952465
[2025-11-24 21:28:23] 2025-11-25 05:27:51,724 | INFO     | chi2: 0.15911798328770885
[2025-11-24 21:28:23] 2025-11-25 05:27:51,724 | INFO     | current memory leak: 6.01 B/s (using 933 data points, chi2=0.16)
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | could have reported an average CPU frequency of 3999 MHz (36 samples)
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | ..............................
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | . Timing measurements:
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | . get job = 0 s
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | . initial setup = 3 s
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | . payload setup = 6 s
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | . stage-in = 0 s
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | . payload execution = 58788 s
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | . stage-out = 3 s
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | . log creation = 0 s
[2025-11-24 21:28:23] 2025-11-25 05:27:51,725 | INFO     | ..............................
[2025-11-24 21:28:23] 2025-11-25 05:27:52,160 | INFO     | 
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | job summary report
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | --------------------------------------------------
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | PanDA job id: 6894246220
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | task id: 47533967
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | errors: (none)
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | pilot state: finished 
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | transexitcode: 0
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | exeerrorcode: 0
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | exeerrordiag: 
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | exitcode: 0
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | exitmsg: OK
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | cpuconsumptiontime: 133702 s
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | nevents: 1000
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | neventsw: 0
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | pid: 2536219
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | pgrp: 2536219
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | corecount: 8
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | event service: False
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | sizes: {0: 2284208, 1: 2284350, 5: 2284612, 11: 2284668, 58798: 2336565, 58803: 2345587, 58807: 2345771, 58814: 2346017}
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | --------------------------------------------------
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | 
[2025-11-24 21:28:23] 2025-11-25 05:27:52,161 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc505/slots/0
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 21:28:23] 2025-11-25 05:27:52,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 21:28:23] 2025-11-25 05:27:52,194 | INFO     | job 6894246220 has completed (purged errors)
[2025-11-24 21:28:23] 2025-11-25 05:27:52,194 | INFO     | overall cleanup function is called
[2025-11-24 21:28:23] 2025-11-25 05:27:53,206 | INFO     | --- collectZombieJob: --- 10, [2536219]
[2025-11-24 21:28:23] 2025-11-25 05:27:53,207 | INFO     | zombie collector waiting for pid 2536219
[2025-11-24 21:28:23] 2025-11-25 05:27:53,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 21:28:23] 2025-11-25 05:27:53,207 | INFO     | collected zombie processes
[2025-11-24 21:28:23] 2025-11-25 05:27:53,207 | INFO     | will attempt to kill all subprocesses of pid=2536219
[2025-11-24 21:28:23] 2025-11-25 05:27:53,485 | INFO     | process IDs to be killed: [2536219] (in reverse order)
[2025-11-24 21:28:23] 2025-11-25 05:27:53,623 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 21:28:23] 2025-11-25 05:27:53,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 21:28:23] 2025-11-25 05:27:53,628 | INFO     | did not find any defunct processes belonging to 2536219
[2025-11-24 21:28:23] 2025-11-25 05:27:53,633 | INFO     | did not find any defunct processes belonging to 2536219
[2025-11-24 21:28:23] 2025-11-25 05:27:53,634 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 21:28:23] 2025-11-25 05:27:53,634 | INFO     | ready for new job
[2025-11-24 21:28:23] 2025-11-25 05:27:53,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 21:28:23] 2025-11-25 05:27:53,638 | INFO     | ***************************************
[2025-11-24 21:28:23] 2025-11-25 05:27:53,638 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 21:28:23] 2025-11-25 05:27:53,638 | INFO     | ***************************************
[2025-11-24 21:28:23] 2025-11-25 05:27:53,638 | INFO     | 
[2025-11-24 21:28:23] 2025-11-25 05:27:53,639 | INFO     | architecture information:
[2025-11-24 21:28:23] 2025-11-25 05:27:53,639 | INFO     | executing command: cat /etc/os-release
[2025-11-24 21:28:23] 2025-11-25 05:27:53,654 | INFO     | cat /etc/os-release:
[2025-11-24 21:28:23] NAME="CentOS Linux"
[2025-11-24 21:28:23] VERSION="7 (Core)"
[2025-11-24 21:28:23] ID="centos"
[2025-11-24 21:28:23] ID_LIKE="rhel fedora"
[2025-11-24 21:28:23] VERSION_ID="7"
[2025-11-24 21:28:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 21:28:23] ANSI_COLOR="0;31"
[2025-11-24 21:28:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 21:28:23] HOME_URL="https://www.centos.org/"
[2025-11-24 21:28:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 21:28:23] 
[2025-11-24 21:28:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 21:28:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 21:28:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 21:28:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:28:23] 
[2025-11-24 21:28:23] 2025-11-25 05:27:53,654 | INFO     | ***************************************
[2025-11-24 21:28:23] 2025-11-25 05:27:54,157 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc505/slots/0
[2025-11-24 21:28:23] 2025-11-25 05:27:54,184 | INFO     | sufficient remaining disk space (184112119808 B)
[2025-11-24 21:28:23] 2025-11-25 05:27:54,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:28:23] 2025-11-25 05:27:54,185 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:28:23] 2025-11-25 05:27:54,185 | INFO     | update_server=False
[2025-11-24 21:28:23] 2025-11-25 05:27:54,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:28:23] 2025-11-25 05:27:54,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:28:23] 2025-11-25 05:27:54,185 | INFO     | aborting loop
[2025-11-24 21:28:23] 2025-11-25 05:27:54,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:28:23] 2025-11-25 05:27:54,500 | INFO     | all data control threads have been joined
[2025-11-24 21:28:23] 2025-11-25 05:27:55,090 | INFO     | all payload control threads have been joined
[2025-11-24 21:28:23] 2025-11-25 05:27:55,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:28:23] 2025-11-25 05:27:55,189 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:55,190 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:55,505 | INFO     | [data] control thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:55,571 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:55,593 | INFO     | all job control threads have been joined
[2025-11-24 21:28:23] 2025-11-25 05:27:55,648 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:55,977 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:56,076 | INFO     | [job] validate thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:56,095 | INFO     | [payload] control thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:56,285 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:56,430 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:56,508 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:56,598 | INFO     | [job] control thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:56,685 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:56,686 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:56,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:28:23] 2025-11-25 05:27:57,792 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:59,157 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:28:23] 2025-11-25 05:27:59,525 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:28:23] 2025-11-25 05:28:01,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127227527731008)>', '<ExcThread(monitor, started 127227031172864)>']
[2025-11-24 21:28:23] 2025-11-25 05:28:06,284 | INFO     | all workflow threads have been joined
[2025-11-24 21:28:23] 2025-11-25 05:28:06,285 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:28:23] 2025-11-25 05:28:06,285 | INFO     | traces error code: 0
[2025-11-24 21:28:23] 2025-11-25 05:28:06,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:28:23] 2025-11-25 05:28:23,601 | INFO     | PID=2528727 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 21:28:23] 2025-11-25 05:28:23,601 | INFO     | .. there are 14 such processes running
[2025-11-24 21:28:23] 2025-11-25 05:28:23,602 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:28:23] 2025-11-25 05:28:23,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:28:23] 2025-11-25 05:28:23,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:28:23] 2025-11-25 05:28:23,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:28:23] 2025-11-25 05:28:23,602 | INFO     | [monitor] control thread has ended
[2025-11-24 21:28:23] 2025-11-25 05:28:23,728 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:28:23] 2025-11-25 05:28:23,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:28:23] 2025-11-25 05:28:23,731 [wrapper] pilotpid: 2528727
[2025-11-24 21:28:23] 2025-11-25 05:28:23,733 [wrapper] Pilot exit status: 0
[2025-11-24 21:28:23] 2025-11-25 05:28:23,748 [wrapper] pandaids: 6894246220
[2025-11-24 21:28:23] 2025-11-25 05:28:23,789 [wrapper] cleanup supervisor_pilot 3849335 2528728
[2025-11-24 21:28:23] 2025-11-25 05:28:23,792 [wrapper] Test setup, not cleaning
[2025-11-24 21:28:23] 2025-11-25 05:28:23,794 [wrapper] apfmon messages muted
[2025-11-24 21:28:23] 2025-11-25 05:28:23,795 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:28:23] 2025-11-25 05:28:23,797 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:28:23]  *** Error codes and diagnostics ***
[2025-11-24 21:28:23]     "exeErrorCode": 0,
[2025-11-24 21:28:23]     "exeErrorDiag": "",
[2025-11-24 21:28:23]     "pilotErrorCode": 0,
[2025-11-24 21:28:23]     "pilotErrorDiag": "",
[2025-11-24 21:28:23]  *** Listing of results directory ***
[2025-11-24 21:28:23] total 1323980
[2025-11-24 21:28:23] -rw-r--r-- 1 root root    576529 Nov 20 17:08 pilot3.tar.gz
[2025-11-24 21:28:23] -rw-r--r-- 1 root root      5112 Nov 20 17:36 queuedata.json
[2025-11-24 21:28:23] -rwx------ 1 4871 1028     36292 Nov 20 17:38 runpilot2-wrapper.sh
[2025-11-24 21:28:23] -rw-r--r-- 1 root root       100 Nov 24 05:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:28:23] -rwxr-xr-x 1 root root      7986 Nov 24 05:07 run_atlas
[2025-11-24 21:28:23] -rw-r--r-- 1 root root       105 Nov 24 05:07 job.xml
[2025-11-24 21:28:23] -rw-r--r-- 2 root root 410014877 Nov 24 05:07 EVNT.47493127._002092.pool.root.1
[2025-11-24 21:28:23] -rw-r--r-- 1 root root      7081 Nov 24 05:07 init_data.xml
[2025-11-24 21:28:23] -rw-r--r-- 2 root root     15847 Nov 24 05:07 start_atlas.sh
[2025-11-24 21:28:23] drwxrwx--x 2 root root      4096 Nov 24 05:07 shared
[2025-11-24 21:28:23] -rw-r--r-- 2 root root    590107 Nov 24 05:07 input.tar.gz
[2025-11-24 21:28:23] -rw-r--r-- 1 root root         0 Nov 24 05:07 boinc_lockfile
[2025-11-24 21:28:23] -rw-r--r-- 1 root root      2785 Nov 24 05:07 pandaJob.out
[2025-11-24 21:28:23] -rw------- 1 root root    988279 Nov 24 05:07 agis_schedconf.cvmfs.json
[2025-11-24 21:28:23] drwxr-xr-x 5  320  320      4096 Nov 24 05:07 pilot3
[2025-11-24 21:28:23] -rw-r--r-- 1 root root       533 Nov 24 21:19 boinc_task_state.xml
[2025-11-24 21:28:23] -rw------- 1 root root 920891730 Nov 24 21:27 HITS.47533967._000636.pool.root.1
[2025-11-24 21:28:23] -rw------- 1 root root      1037 Nov 24 21:27 memory_monitor_summary.json
[2025-11-24 21:28:23] -rw------- 1 root root   1516227 Nov 24 21:27 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:28:23] -rw------- 1 root root   2117272 Nov 24 21:27 log.47533967._000636.job.log.tgz.1
[2025-11-24 21:28:23] -rw------- 1 root root        95 Nov 24 21:27 pilot_heartbeat.json
[2025-11-24 21:28:23] -rw------- 1 root root      8564 Nov 24 21:27 heartbeat.json
[2025-11-24 21:28:23] -rw-r--r-- 1 root root      8192 Nov 24 21:28 boinc_mmap_file
[2025-11-24 21:28:23] -rw-r--r-- 1 root root        29 Nov 24 21:28 wrapper_checkpoint.txt
[2025-11-24 21:28:23] -rw------- 1 root root       823 Nov 24 21:28 pilotlog.txt
[2025-11-24 21:28:23] -rw------- 1 root root   8352453 Nov 24 21:28 log.47533967._000636.job.log.1
[2025-11-24 21:28:23] -rw------- 1 root root       353 Nov 24 21:28 output.list
[2025-11-24 21:28:23] -rw-r--r-- 1 root root       620 Nov 24 21:28 runtime_log
[2025-11-24 21:28:23] -rw------- 1 root root  10485760 Nov 24 21:28 result.tar.gz
[2025-11-24 21:28:23] -rw------- 1 root root       657 Nov 24 21:28 Ug0NDmXHVg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmApIKDmJT9iem.diag
[2025-11-24 21:28:23] -rw-r--r-- 1 root root      9019 Nov 24 21:28 runtime_log.err
[2025-11-24 21:28:23] -rw-r--r-- 1 root root     21476 Nov 24 21:28 stderr.txt
[2025-11-24 21:28:23] HITS file was successfully produced:
[2025-11-24 21:28:23] -rw------- 1 root root 920891730 Nov 24 21:27 shared/HITS.pool.root.1
[2025-11-24 21:28:23]  *** Contents of shared directory: ***
[2025-11-24 21:28:23] total 1310564
[2025-11-24 21:28:23] -rw-r--r-- 2 root root 410014877 Nov 24 05:07 ATLAS.root_0
[2025-11-24 21:28:23] -rw-r--r-- 2 root root     15847 Nov 24 05:07 start_atlas.sh
[2025-11-24 21:28:23] -rw-r--r-- 2 root root    590107 Nov 24 05:07 input.tar.gz
[2025-11-24 21:28:23] -rw------- 1 root root 920891730 Nov 24 21:27 HITS.pool.root.1
[2025-11-24 21:28:23] -rw------- 1 root root  10485760 Nov 24 21:28 result.tar.gz
21:28:25 (2522759): run_atlas exited; CPU time 133975.456924
21:28:25 (2522759): called boinc_finish(0)

</stderr_txt>
]]>

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