Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:05:58 (1169621): wrapper (7.7.26015): starting
15:05:58 (1169621): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 15:05:58] Arguments: --nthreads 3
[2025-11-24 15:05:58] Threads: 3
[2025-11-24 15:05:58] Checking for CVMFS
[2025-11-24 15:05:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 15:05:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 15:05:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 15:05:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 15:05:59] 2.9.2.0 28796 8491 89420 153247 2 81 30297524 36864000 0 130560 0 3170598 99.923 466641 6802 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 15:05:59] CVMFS is ok
[2025-11-24 15:05:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 15:05:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 15:05:59] Further information can be found at the LHC@home message board.
[2025-11-24 15:05:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 15:05:59] Checking for apptainer binary...
[2025-11-24 15:05:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 15:05:59] Running /usr/bin/apptainer --version
[2025-11-24 15:05:59] apptainer version 1.4.1-1.1
[2025-11-24 15:05:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 15:05:59] thA331b
[2025-11-24 15:05:59] apptainer works
[2025-11-24 15:05:59] Set ATHENA_PROC_NUMBER=3
[2025-11-24 15:05:59] Set ATHENA_CORE_NUMBER=3
[2025-11-24 15:05:59] Starting ATLAS job with PandaID=6894273726
[2025-11-24 15:05:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:03:43]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:03:43] 2025-11-24 22:02:50,582 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:02:50,773 | INFO     | all payload control threads have been joined
[2025-11-24 23:03:43] 2025-11-24 22:02:50,878 | INFO     | [job] control thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:02:51,099 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:02:51,158 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:02:51,344 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:02:51,464 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:02:51,470 | INFO     | [job] validate thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:02:51,779 | INFO     | [payload] control thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:02:54,427 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:03:00,042 | INFO     | job.realtimelogging is not enabled
[2025-11-24 23:03:43] 2025-11-24 22:03:01,048 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:03:43] 2025-11-24 22:03:20,124 | INFO     | PID=1173342 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:03:43] 2025-11-24 22:03:20,125 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:03:43] 2025-11-24 22:03:20,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:03:43] 2025-11-24 22:03:20,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:03:43] 2025-11-24 22:03:36,433 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:03:43] 2025-11-24 22:03:38,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140563983042368)>', '<ExcThread(monitor, started 140563634431744)>']
[2025-11-24 23:03:43] 2025-11-24 22:03:38,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:03:43] 2025-11-24 22:03:38,212 | INFO     | [monitor] control thread has ended
[2025-11-24 23:03:43] 2025-11-24 22:03:43,121 | INFO     | all workflow threads have been joined
[2025-11-24 23:03:43] 2025-11-24 22:03:43,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:03:43] 2025-11-24 22:03:43,121 | INFO     | traces error code: 0
[2025-11-24 23:03:43] 2025-11-24 22:03:43,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:03:43] 2025-11-24 22:03:43,173 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:03:43] 2025-11-24 22:03:43,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:03:43] 2025-11-24 22:03:43,178 [wrapper] pilotpid: 1173342
[2025-11-24 23:03:43] 2025-11-24 22:03:43,180 [wrapper] Pilot exit status: 0
[2025-11-24 23:03:43] 2025-11-24 22:03:43,187 [wrapper] pandaids: 6894273726
[2025-11-24 23:03:43] 2025-11-24 22:03:43,203 [wrapper] cleanup supervisor_pilot 1229368 1173343
[2025-11-24 23:03:43] 2025-11-24 22:03:43,206 [wrapper] Test setup, not cleaning
[2025-11-24 23:03:43] 2025-11-24 22:03:43,208 [wrapper] apfmon messages muted
[2025-11-24 23:03:43] 2025-11-24 22:03:43,210 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:03:43] 2025-11-24 22:03:43,212 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:03:43]  *** Error codes and diagnostics ***
[2025-11-24 23:03:43]     "exeErrorCode": 0,
[2025-11-24 23:03:43]     "exeErrorDiag": "",
[2025-11-24 23:03:43]     "pilotErrorCode": 0,
[2025-11-24 23:03:43]     "pilotErrorDiag": "",
[2025-11-24 23:03:43]  *** Listing of results directory ***
[2025-11-24 23:03:43] total 1321712
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc    576529 Nov 21 08:07 pilot3.tar.gz
[2025-11-24 23:03:43] -rwx------ 1 boinc boinc     36292 Nov 21 08:23 runpilot2-wrapper.sh
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc      5112 Nov 21 08:23 queuedata.json
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc       100 Nov 24 15:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:03:43] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 15:05 run_atlas
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc       105 Nov 24 15:05 job.xml
[2025-11-24 23:03:43] -rw-r--r-- 2 boinc boinc 411331095 Nov 24 15:05 EVNT.47493127._002298.pool.root.1
[2025-11-24 23:03:43] -rw-r--r-- 2 boinc boinc    590100 Nov 24 15:05 input.tar.gz
[2025-11-24 23:03:43] -rw-r--r-- 2 boinc boinc     15847 Nov 24 15:05 start_atlas.sh
[2025-11-24 23:03:43] drwxrwx--x 2 boinc boinc      4096 Nov 24 15:05 shared
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc         0 Nov 24 15:05 boinc_setup_complete
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc      6441 Nov 24 15:05 init_data.xml
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc         0 Nov 24 15:05 boinc_lockfile
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc      2786 Nov 24 15:05 pandaJob.out
[2025-11-24 23:03:43] -rw------- 1 boinc boinc    988280 Nov 24 15:06 agis_schedconf.cvmfs.json
[2025-11-24 23:03:43] drwx------ 5 boinc boinc      4096 Nov 24 15:06 pilot3
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc       531 Nov 24 22:59 boinc_task_state.xml
[2025-11-24 23:03:43] -rw------- 1 boinc boinc 927815503 Nov 24 23:02 HITS.47533967._002695.pool.root.1
[2025-11-24 23:03:43] -rw------- 1 boinc boinc        95 Nov 24 23:02 pilot_heartbeat.json
[2025-11-24 23:03:43] -rw------- 1 boinc boinc      1037 Nov 24 23:02 memory_monitor_summary.json
[2025-11-24 23:03:43] -rw------- 1 boinc boinc   1516227 Nov 24 23:02 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:03:43] -rw------- 1 boinc boinc   1163380 Nov 24 23:02 log.47533967._002695.job.log.tgz.1
[2025-11-24 23:03:43] -rw------- 1 boinc boinc      8567 Nov 24 23:02 heartbeat.json
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc      8192 Nov 24 23:03 boinc_mmap_file
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc        28 Nov 24 23:03 wrapper_checkpoint.txt
[2025-11-24 23:03:43] -rw------- 1 boinc boinc      4824 Nov 24 23:03 pilotlog.txt
[2025-11-24 23:03:43] -rw------- 1 boinc boinc   4026954 Nov 24 23:03 log.47533967._002695.job.log.1
[2025-11-24 23:03:43] -rw------- 1 boinc boinc       353 Nov 24 23:03 output.list
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc       620 Nov 24 23:03 runtime_log
[2025-11-24 23:03:43] -rw------- 1 boinc boinc   5212160 Nov 24 23:03 result.tar.gz
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc      8903 Nov 24 23:03 runtime_log.err
[2025-11-24 23:03:43] -rw------- 1 boinc boinc       666 Nov 24 23:03 i85MDmEfag8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgBJKDmeOiORo.diag
[2025-11-24 23:03:43] -rw-r--r-- 1 boinc boinc      5904 Nov 24 23:03 stderr.txt
[2025-11-24 23:03:43] HITS file was successfully produced:
[2025-11-24 23:03:43] -rw------- 1 boinc boinc 927815503 Nov 24 23:02 shared/HITS.pool.root.1
[2025-11-24 23:03:43]  *** Contents of shared directory: ***
[2025-11-24 23:03:43] total 1313460
[2025-11-24 23:03:43] -rw-r--r-- 2 boinc boinc 411331095 Nov 24 15:05 ATLAS.root_0
[2025-11-24 23:03:43] -rw-r--r-- 2 boinc boinc    590100 Nov 24 15:05 input.tar.gz
[2025-11-24 23:03:43] -rw-r--r-- 2 boinc boinc     15847 Nov 24 15:05 start_atlas.sh
[2025-11-24 23:03:43] -rw------- 1 boinc boinc 927815503 Nov 24 23:02 HITS.pool.root.1
[2025-11-24 23:03:43] -rw------- 1 boinc boinc   5212160 Nov 24 23:03 result.tar.gz
23:03:44 (1169621): run_atlas exited; CPU time 84441.876047
23:03:44 (1169621): called boinc_finish(0)

</stderr_txt>
]]>

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