Stderr output

<core_client_version>7.16.16</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 08:06:00 (44865): vboxwrapper version 26210
2025-11-22 08:06:00 (44865): BOINC client version: 7.16.16
2025-11-22 08:06:00 (44865): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-22 08:06:00 (44865): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 08:06:00 (44865): Create VM. (boinc_1a0bc8592b596d8e, slot#0)
2025-11-22 08:06:00 (44865): Setting Memory Size for VM. (4400MB)
2025-11-22 08:06:00 (44865): Setting CPU Count for VM. (4)
2025-11-22 08:06:00 (44865): Setting Chipset Options for VM.
2025-11-22 08:06:01 (44865): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 08:06:01 (44865): Setting Boot Options for VM.
2025-11-22 08:06:01 (44865): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 08:06:01 (44865): Enabling VM Network Access.
2025-11-22 08:06:01 (44865): Disabling USB Support for VM.
2025-11-22 08:06:01 (44865): Disabling COM Port Support for VM.
2025-11-22 08:06:01 (44865): Disabling LPT Port Support for VM.
2025-11-22 08:06:01 (44865): Disabling Audio Support for VM.
2025-11-22 08:06:01 (44865): Disabling Clipboard Support for VM.
2025-11-22 08:06:01 (44865): Disabling Drag and Drop Support for VM.
2025-11-22 08:06:01 (44865): Adding storage controller(s) to VM.
2025-11-22 08:06:01 (44865): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 08:06:02 (44865): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 08:06:02 (44865): forwarding host port 50999 to guest port 80
2025-11-22 08:06:02 (44865): Enabling remote desktop for VM.
2025-11-22 08:06:02 (44865): Enabling shared directory for VM.
2025-11-22 08:06:02 (44865): Starting VM using VBoxManage interface. (boinc_1a0bc8592b596d8e, slot#0)
2025-11-22 08:06:03 (44865): Successfully started VM. (PID = '45350')
2025-11-22 08:06:03 (44865): Reporting VM Process ID to BOINC.
2025-11-22 08:06:03 (44865): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-22 08:06:03 (44865): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 08:06:03 (44865): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 08:06:03 (44865): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 08:06:03 (44865): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 08:06:03 (44865): Detected: Web Application Enabled (http://localhost:50999)
2025-11-22 08:06:03 (44865): Detected: Remote Desktop Enabled (localhost:54037)
2025-11-22 08:06:03 (44865): Preference change detected
2025-11-22 08:06:03 (44865): Setting CPU throttle for VM. (100%)
2025-11-22 08:06:03 (44865): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 08:06:05 (44865): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 08:06:05 (44865): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 08:06:08 (44865): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 08:06:08 (44865): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 08:06:08 (44865): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 08:06:13 (44865): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 08:06:13 (44865): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-22 08:06:19 (44865): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 08:06:19 (44865): Guest Log: 00:00:00.000133 main     Log opened 2025-11-22T14:06:16.801774000Z
2025-11-22 08:06:19 (44865): Guest Log: 00:00:00.000206 main     OS Product: Linux
2025-11-22 08:06:19 (44865): Guest Log: 00:00:00.000228 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 08:06:19 (44865): Guest Log: 00:00:00.000244 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 08:06:19 (44865): Guest Log: 00:00:00.000260 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 08:06:19 (44865): Guest Log: 00:00:00.000260 main     Process ID: 1297
2025-11-22 08:06:19 (44865): Guest Log: 00:00:00.000261 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 08:06:19 (44865): Guest Log: 00:00:00.001506 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 08:06:19 (44865): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 08:06:19 (44865): Guest Log: [INFO] Mounting shared directory
2025-11-22 08:06:19 (44865): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 08:06:21 (44865): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 08:06:21 (44865): Guest Log: [INFO] Detected branch: prod
2025-11-22 08:06:22 (44865): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 08:06:22 (44865): Guest Log: Copying input files
2025-11-22 08:06:23 (44865): Guest Log: Copied input files into RunAtlas.
2025-11-22 08:06:24 (44865): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-22 08:06:24 (44865): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-22 08:06:24 (44865): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-22 08:06:24 (44865): Guest Log: Further information can be found at the LHC@home message board.
2025-11-22 08:06:33 (44865): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-22 08:06:33 (44865): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-22 08:06:33 (44865): Guest Log: 2.6.3.0 1573 0 30200 153173 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-22 08:06:34 (44865): Guest Log: copied the webapp to /var/www
2025-11-22 08:06:34 (44865): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-22 08:06:34 (44865): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-22 08:06:34 (44865): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-22 08:06:35 (44865): Guest Log:  *** Starting ATLAS job. (PandaID=6894245862 taskID=47533967) ***
2025-11-22 09:45:15 (44865): Status Report: Elapsed Time: '6000.000000'
2025-11-22 09:45:15 (44865): Status Report: CPU Time: '22618.310000'
2025-11-22 11:24:27 (44865): Status Report: Elapsed Time: '12000.000000'
2025-11-22 11:24:27 (44865): Status Report: CPU Time: '46383.250000'
2025-11-22 13:03:38 (44865): Status Report: Elapsed Time: '18000.000000'
2025-11-22 13:03:38 (44865): Status Report: CPU Time: '70149.910000'
2025-11-22 14:42:50 (44865): Status Report: Elapsed Time: '24000.000000'
2025-11-22 14:42:50 (44865): Status Report: CPU Time: '93917.790000'
2025-11-22 16:22:02 (44865): Status Report: Elapsed Time: '30000.000000'
2025-11-22 16:22:02 (44865): Status Report: CPU Time: '117691.240000'
2025-11-22 17:29:05 (44865): Guest Log:  *** Job finished ***
2025-11-22 17:29:05 (44865): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:28:01,689 | INFO     | [payload] execute_payloads thread has finished
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:28:03,224 | INFO     | [data] queue_monitor thread has finished
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:28:57,836 | INFO     | [monitor] cgroup control has ended
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:28:59,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214971557696)>', '<ExcThread(monitor, started 140214097929984)>']
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:00,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:00,018 | INFO     | [monitor] control thread has ended
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,246 | INFO     | all workflow threads have been joined
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,246 | INFO     | end of generic workflow (traces error code: 0)
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,246 | INFO     | traces error code: 0
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,320 [wrapper] ==== pilot stdout END ====
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,325 [wrapper] ==== wrapper stdout RESUME ====
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,330 [wrapper] pilotpid: 5975
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,335 [wrapper] Pilot exit status: 0
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,353 [wrapper] pandaids: 6894245862
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,390 [wrapper] cleanup supervisor_pilot 11253 5976
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,398 [wrapper] Test setup, not cleaning
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,403 [wrapper] apfmon messages muted
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,407 [wrapper] ==== wrapper stdout END ====
2025-11-22 17:29:05 (44865): Guest Log: 2025-11-22 23:29:04,411 [wrapper] ==== wrapper stderr END ====
2025-11-22 17:29:05 (44865): Guest Log:  *** Error codes and diagnostics ***
2025-11-22 17:29:05 (44865): Guest Log:     "exeErrorCode": 0,
2025-11-22 17:29:05 (44865): Guest Log:     "exeErrorDiag": "",
2025-11-22 17:29:05 (44865): Guest Log:     "pilotErrorCode": 0,
2025-11-22 17:29:05 (44865): Guest Log:     "pilotErrorDiag": "",
2025-11-22 17:29:05 (44865): Guest Log:  *** Listing of results directory ***
2025-11-22 17:29:05 (44865): Guest Log: total 909192
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 01:08 pilot3.tar.gz
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 01:17 queuedata.json
2025-11-22 17:29:05 (44865): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 01:18 runpilot2-wrapper.sh
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 22 14:06 start_atlas.sh
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 atlas atlas    590104 Nov 22 14:06 input.tar.gz
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 atlas atlas      9078 Nov 22 14:06 init_data.xml
2025-11-22 17:29:05 (44865): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 22 14:06 EVNT.47493127._002084.pool.root.1 -> /data/./ATLAS.root_0
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 22 14:06 pandaJob.out
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas    989768 Nov 22 14:07 agis_schedconf.cvmfs.json
2025-11-22 17:29:05 (44865): Guest Log: drwx------. 5 atlas atlas      4096 Nov 22 14:07 pilot3
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas 915769510 Nov 22 23:27 HITS.47533967._000553.pool.root.1
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas        95 Nov 22 23:27 pilot_heartbeat.json
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 22 23:27 memory_monitor_summary.json
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 22 23:27 agis_ddmendpoints.agis.ALL.json
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas   1356091 Nov 22 23:27 log.47533967._000553.job.log.tgz.1
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas      8665 Nov 22 23:27 heartbeat.json
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 22 23:29 pilotlog.txt
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas   4337789 Nov 22 23:29 log.47533967._000553.job.log.1
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas       353 Nov 22 23:29 output.list
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 22 23:29 runtime_log
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas   5713920 Nov 22 23:29 result.tar.gz
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Nov 22 23:29 runtime_log.err
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas       665 Nov 22 23:29 IjKMDmUyUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqnIKDmsaTiyn.diag
2025-11-22 17:29:05 (44865): Guest Log: Looking for outputfile HITS.47533967._000553.pool.root.1
2025-11-22 17:29:05 (44865): Guest Log: HITS file was successfully produced
2025-11-22 17:29:05 (44865): Guest Log: -rw-------. 1 atlas atlas 915769510 Nov 22 23:27 /home/atlas/RunAtlas/HITS.47533967._000553.pool.root.1
2025-11-22 17:29:05 (44865): Guest Log: Successfully finished the ATLAS job!
2025-11-22 17:29:05 (44865): Guest Log: Copying the results back to the shared directory!
2025-11-22 17:29:05 (44865): Guest Log:  *** Contents of shared directory: ***
2025-11-22 17:29:05 (44865): Guest Log: total 404692
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 root root 408066602 Nov 22 14:06 ATLAS.root_0
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 root root      9078 Nov 22 14:06 init_data.xml
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 root root    590104 Nov 22 14:06 input.tar.gz
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 root root   5713920 Nov 22 23:29 result.tar.gz
2025-11-22 17:29:05 (44865): Guest Log: -rw-r--r--. 1 root root     15847 Nov 22 14:06 start_atlas.sh
2025-11-22 17:29:05 (44865): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-22 17:29:05 (44865): VM Completion File Detected.
2025-11-22 17:29:05 (44865): Powering off VM.
2025-11-22 17:29:05 (44865): Successfully stopped VM.
2025-11-22 17:29:05 (44865): Deregistering VM. (boinc_1a0bc8592b596d8e, slot#0)
2025-11-22 17:29:06 (44865): Removing network bandwidth throttle group from VM.
2025-11-22 17:29:06 (44865): Removing VM from VirtualBox.
2025-11-22 17:29:11 (44865): called boinc_finish(0)

</stderr_txt>
]]>

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