Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:32:07 (15162): wrapper (7.7.26015): starting
19:32:07 (15162): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 19:32:07] Arguments: --nthreads 12
[2025-11-21 19:32:07] Threads: 12
[2025-11-21 19:32:07] Checking for CVMFS
[2025-11-21 19:32:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 19:32:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 19:32:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 19:32:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 19:32:07] 2.11.2.0 6893 111119 94008 153153 0 81 13705468 20275201 1 130560 0 47550538 99.930 5791894 30764 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 19:32:07] CVMFS is ok
[2025-11-21 19:32:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 19:32:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 19:32:07] Further information can be found at the LHC@home message board.
[2025-11-21 19:32:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 19:32:07] Checking for apptainer binary...
[2025-11-21 19:32:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 19:32:07] Running /usr/bin/apptainer --version
[2025-11-21 19:32:07] apptainer version 1.3.2-1.el7
[2025-11-21 19:32:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 19:32:08] c-205-3.aglt2.org
[2025-11-21 19:32:08] apptainer works
[2025-11-21 19:32:08] Set ATHENA_PROC_NUMBER=12
[2025-11-21 19:32:08] Set ATHENA_CORE_NUMBER=12
[2025-11-21 19:32:08] Starting ATLAS job with PandaID=6894270935
[2025-11-21 19:32:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 02:32:11]  *** The last 200 lines of the pilot log: ***
[2025-11-22 02:32:11] 2025-11-22 07:31:18,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 02:32:11] 2025-11-22 07:31:18,669 | INFO     | time since job start (25134s) is within the limit (172800.0s)
[2025-11-22 02:32:11] 2025-11-22 07:31:18,904 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 02:32:11] 2025-11-22 07:31:18,908 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-11-22 02:32:11] 2025-11-22 07:31:18,911 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894270935/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 02:32:11] 2025-11-22 07:31:18,912 | INFO     | extracted standard info from prmon json
[2025-11-22 02:32:11] 2025-11-22 07:31:18,912 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 02:32:11] 2025-11-22 07:31:18,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 02:32:11] 2025-11-22 07:31:18,919 | INFO     | fitting pss+swap vs Time
[2025-11-22 02:32:11] 2025-11-22 07:31:18,920 | INFO     | sum of square deviations: 21685282303.094677
[2025-11-22 02:32:11] 2025-11-22 07:31:18,923 | INFO     | sum of deviations: 284100467741.2503
[2025-11-22 02:32:11] 2025-11-22 07:31:18,923 | INFO     | mean x: 1763784108.7305825
[2025-11-22 02:32:11] 2025-11-22 07:31:18,923 | INFO     | mean y: 3439659.75
[2025-11-22 02:32:11] 2025-11-22 07:31:18,924 | INFO     | intersect: -23104024807.679718
[2025-11-22 02:32:11] 2025-11-22 07:31:18,924 | INFO     | chi2: 6.733728722765717
[2025-11-22 02:32:11] 2025-11-22 07:31:18,925 | INFO     | sum of square deviations: 20905333862.825638
[2025-11-22 02:32:11] 2025-11-22 07:31:18,928 | INFO     | sum of deviations: 455825311206.0348
[2025-11-22 02:32:11] 2025-11-22 07:31:18,928 | INFO     | mean x: 1763783956.2334151
[2025-11-22 02:32:11] 2025-11-22 07:31:18,929 | INFO     | mean y: 3473207.968058968
[2025-11-22 02:32:11] 2025-11-22 07:31:18,929 | INFO     | intersect: -38454528755.82547
[2025-11-22 02:32:11] 2025-11-22 07:31:18,929 | INFO     | chi2: 3.2341369084623497
[2025-11-22 02:32:11] 2025-11-22 07:31:18,929 | INFO     | current chi2=3.2341369084623497 (change=51.971084051422764 %)
[2025-11-22 02:32:11] 2025-11-22 07:31:18,930 | INFO     | sum of square deviations: 20144316010.049698
[2025-11-22 02:32:11] 2025-11-22 07:31:18,933 | INFO     | sum of deviations: 521233795681.6564
[2025-11-22 02:32:11] 2025-11-22 07:31:18,933 | INFO     | mean x: 1763783803.7363183
[2025-11-22 02:32:11] 2025-11-22 07:31:18,934 | INFO     | mean y: 3486270.119402985
[2025-11-22 02:32:11] 2025-11-22 07:31:18,934 | INFO     | intersect: -45634386285.3282
[2025-11-22 02:32:11] 2025-11-22 07:31:18,934 | INFO     | chi2: 2.509961290211398
[2025-11-22 02:32:11] 2025-11-22 07:31:18,934 | INFO     | current chi2=2.509961290211398 (change=22.39161911655918 %)
[2025-11-22 02:32:11] 2025-11-22 07:31:18,934 | INFO     | right removable region: 401
[2025-11-22 02:32:11] 2025-11-22 07:31:18,935 | INFO     | sum of square deviations: 20905275912.82564
[2025-11-22 02:32:11] 2025-11-22 07:31:18,938 | INFO     | sum of deviations: 145420395719.41785
[2025-11-22 02:32:11] 2025-11-22 07:31:18,939 | INFO     | mean x: 1763784261.2334151
[2025-11-22 02:32:11] 2025-11-22 07:31:18,939 | INFO     | mean y: 3466692.4692874695
[2025-11-22 02:32:11] 2025-11-22 07:31:18,939 | INFO     | intersect: -12265694752.794605
[2025-11-22 02:32:11] 2025-11-22 07:31:18,939 | INFO     | chi2: 4.375312209994001
[2025-11-22 02:32:11] 2025-11-22 07:31:18,939 | INFO     | current chi2=4.375312209994001 (change=35.02393116607544 %)
[2025-11-22 02:32:11] 2025-11-22 07:31:18,940 | INFO     | sum of square deviations: 20144249762.98493
[2025-11-22 02:32:11] 2025-11-22 07:31:18,943 | INFO     | sum of deviations: 115039976113.55219
[2025-11-22 02:32:11] 2025-11-22 07:31:18,944 | INFO     | mean x: 1763784413.7313433
[2025-11-22 02:32:11] 2025-11-22 07:31:18,944 | INFO     | mean y: 3472773.106965174
[2025-11-22 02:32:11] 2025-11-22 07:31:18,944 | INFO     | intersect: -10069164292.679855
[2025-11-22 02:32:11] 2025-11-22 07:31:18,944 | INFO     | chi2: 4.32105930463615
[2025-11-22 02:32:11] 2025-11-22 07:31:18,944 | INFO     | current chi2=4.32105930463615 (change=1.2399779205225052 %)
[2025-11-22 02:32:11] 2025-11-22 07:31:18,944 | INFO     | left removable region: 20
[2025-11-22 02:32:11] 2025-11-22 07:31:18,945 | INFO     | sum of square deviations: 17149427462.21008
[2025-11-22 02:32:11] 2025-11-22 07:31:18,948 | INFO     | sum of deviations: 311744185561.0499
[2025-11-22 02:32:11] 2025-11-22 07:31:18,948 | INFO     | mean x: 1763784383.2335958
[2025-11-22 02:32:11] 2025-11-22 07:31:18,948 | INFO     | mean y: 3529079.1679790025
[2025-11-22 02:32:11] 2025-11-22 07:31:18,948 | INFO     | intersect: -32058738146.25903
[2025-11-22 02:32:11] 2025-11-22 07:31:18,949 | INFO     | chi2: 0.027019137077579664
[2025-11-22 02:32:11] 2025-11-22 07:31:18,949 | INFO     | current memory leak: 18.18 B/s (using 381 data points, chi2=0.03)
[2025-11-22 02:32:11] 2025-11-22 07:31:18,950 | INFO     | could have reported an average CPU frequency of 2412 MHz (17 samples)
[2025-11-22 02:32:11] 2025-11-22 07:31:18,950 | INFO     | ..............................
[2025-11-22 02:32:11] 2025-11-22 07:31:18,950 | INFO     | . Timing measurements:
[2025-11-22 02:32:11] 2025-11-22 07:31:18,950 | INFO     | . get job = 0 s
[2025-11-22 02:32:11] 2025-11-22 07:31:18,950 | INFO     | . initial setup = 2 s
[2025-11-22 02:32:11] 2025-11-22 07:31:18,950 | INFO     | . payload setup = 7 s
[2025-11-22 02:32:11] 2025-11-22 07:31:18,950 | INFO     | . stage-in = 0 s
[2025-11-22 02:32:11] 2025-11-22 07:31:18,950 | INFO     | . payload execution = 25097 s
[2025-11-22 02:32:11] 2025-11-22 07:31:18,950 | INFO     | . stage-out = 3 s
[2025-11-22 02:32:11] 2025-11-22 07:31:18,951 | INFO     | . log creation = 0 s
[2025-11-22 02:32:11] 2025-11-22 07:31:18,951 | INFO     | ..............................
[2025-11-22 02:32:11] 2025-11-22 07:31:19,034 | INFO     | 
[2025-11-22 02:32:11] 2025-11-22 07:31:19,034 | INFO     | job summary report
[2025-11-22 02:32:11] 2025-11-22 07:31:19,034 | INFO     | --------------------------------------------------
[2025-11-22 02:32:11] 2025-11-22 07:31:19,034 | INFO     | PanDA job id: 6894270935
[2025-11-22 02:32:11] 2025-11-22 07:31:19,034 | INFO     | task id: 47533967
[2025-11-22 02:32:11] 2025-11-22 07:31:19,035 | INFO     | errors: (none)
[2025-11-22 02:32:11] 2025-11-22 07:31:19,035 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 02:32:11] 2025-11-22 07:31:19,035 | INFO     | pilot state: finished 
[2025-11-22 02:32:11] 2025-11-22 07:31:19,035 | INFO     | transexitcode: 0
[2025-11-22 02:32:11] 2025-11-22 07:31:19,035 | INFO     | exeerrorcode: 0
[2025-11-22 02:32:11] 2025-11-22 07:31:19,035 | INFO     | exeerrordiag: 
[2025-11-22 02:32:11] 2025-11-22 07:31:19,036 | INFO     | exitcode: 0
[2025-11-22 02:32:11] 2025-11-22 07:31:19,036 | INFO     | exitmsg: OK
[2025-11-22 02:32:11] 2025-11-22 07:31:19,036 | INFO     | cpuconsumptiontime: 287406 s
[2025-11-22 02:32:11] 2025-11-22 07:31:19,036 | INFO     | nevents: 1000
[2025-11-22 02:32:11] 2025-11-22 07:31:19,036 | INFO     | neventsw: 0
[2025-11-22 02:32:11] 2025-11-22 07:31:19,036 | INFO     | pid: 25268
[2025-11-22 02:32:11] 2025-11-22 07:31:19,036 | INFO     | pgrp: 25268
[2025-11-22 02:32:11] 2025-11-22 07:31:19,037 | INFO     | corecount: 12
[2025-11-22 02:32:11] 2025-11-22 07:31:19,037 | INFO     | event service: False
[2025-11-22 02:32:11] 2025-11-22 07:31:19,037 | INFO     | sizes: {0: 2298529, 1: 2298784, 6: 2299046, 12: 2299074, 25109: 2335998, 25113: 2344992, 25114: 2345176, 25119: 2345486}
[2025-11-22 02:32:11] 2025-11-22 07:31:19,037 | INFO     | --------------------------------------------------
[2025-11-22 02:32:11] 2025-11-22 07:31:19,037 | INFO     | 
[2025-11-22 02:32:11] 2025-11-22 07:31:19,037 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 02:32:11] 2025-11-22 07:31:19,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 02:32:11] 2025-11-22 07:31:19,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,066 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 02:32:11] 2025-11-22 07:31:19,066 | INFO     | job 6894270935 has completed (purged errors)
[2025-11-22 02:32:11] 2025-11-22 07:31:19,066 | INFO     | overall cleanup function is called
[2025-11-22 02:32:11] 2025-11-22 07:31:20,083 | INFO     | --- collectZombieJob: --- 10, [25268]
[2025-11-22 02:32:11] 2025-11-22 07:31:20,083 | INFO     | zombie collector waiting for pid 25268
[2025-11-22 02:32:11] 2025-11-22 07:31:20,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 02:32:11] 2025-11-22 07:31:20,083 | INFO     | collected zombie processes
[2025-11-22 02:32:11] 2025-11-22 07:31:20,083 | INFO     | will attempt to kill all subprocesses of pid=25268
[2025-11-22 02:32:11] 2025-11-22 07:31:20,176 | INFO     | process IDs to be killed: [25268] (in reverse order)
[2025-11-22 02:32:11] 2025-11-22 07:31:20,228 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 02:32:11] 2025-11-22 07:31:20,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 02:32:11] 2025-11-22 07:31:20,232 | INFO     | did not find any defunct processes belonging to 25268
[2025-11-22 02:32:11] 2025-11-22 07:31:20,234 | INFO     | did not find any defunct processes belonging to 25268
[2025-11-22 02:32:11] 2025-11-22 07:31:20,237 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 02:32:11] 2025-11-22 07:31:20,237 | INFO     | ready for new job
[2025-11-22 02:32:11] 2025-11-22 07:31:20,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 02:32:11] 2025-11-22 07:31:20,239 | INFO     | ***************************************
[2025-11-22 02:32:11] 2025-11-22 07:31:20,239 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 02:32:11] 2025-11-22 07:31:20,240 | INFO     | ***************************************
[2025-11-22 02:32:11] 2025-11-22 07:31:20,240 | INFO     | 
[2025-11-22 02:32:11] 2025-11-22 07:31:20,240 | INFO     | architecture information:
[2025-11-22 02:32:11] 2025-11-22 07:31:20,241 | INFO     | executing command: cat /etc/os-release
[2025-11-22 02:32:11] 2025-11-22 07:31:20,256 | INFO     | cat /etc/os-release:
[2025-11-22 02:32:11] NAME="CentOS Linux"
[2025-11-22 02:32:11] VERSION="7 (Core)"
[2025-11-22 02:32:11] ID="centos"
[2025-11-22 02:32:11] ID_LIKE="rhel fedora"
[2025-11-22 02:32:11] VERSION_ID="7"
[2025-11-22 02:32:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 02:32:11] ANSI_COLOR="0;31"
[2025-11-22 02:32:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 02:32:11] HOME_URL="https://www.centos.org/"
[2025-11-22 02:32:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 02:32:11] 
[2025-11-22 02:32:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 02:32:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 02:32:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 02:32:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 02:32:11] 
[2025-11-22 02:32:11] 2025-11-22 07:31:20,257 | INFO     | ***************************************
[2025-11-22 02:32:11] 2025-11-22 07:31:20,760 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 02:32:11] 2025-11-22 07:31:20,777 | INFO     | sufficient remaining disk space (28391243776 B)
[2025-11-22 02:32:11] 2025-11-22 07:31:20,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 02:32:11] 2025-11-22 07:31:20,778 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 02:32:11] 2025-11-22 07:31:20,778 | INFO     | update_server=False
[2025-11-22 02:32:11] 2025-11-22 07:31:20,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 02:32:11] 2025-11-22 07:31:20,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 02:32:11] 2025-11-22 07:31:20,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 02:32:11] 2025-11-22 07:31:21,058 | INFO     | all data control threads have been joined
[2025-11-22 02:32:11] 2025-11-22 07:31:21,059 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 02:32:11] 2025-11-22 07:31:21,059 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 02:32:11] 2025-11-22 07:31:21,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 02:32:11] 2025-11-22 07:31:21,060 | INFO     | will abort loop
[2025-11-22 02:32:11] 2025-11-22 07:31:21,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 02:32:11] 2025-11-22 07:31:21,541 | INFO     | all payload control threads have been joined
[2025-11-22 02:32:11] 2025-11-22 07:31:21,782 | INFO     | [job] queue monitor thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:21,784 | INFO     | [job] retrieve thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:21,997 | INFO     | all job control threads have been joined
[2025-11-22 02:32:11] 2025-11-22 07:31:22,011 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:22,063 | INFO     | [data] control thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:22,065 | INFO     | [job] job monitor thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:22,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:22,470 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:22,546 | INFO     | [payload] control thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:22,669 | INFO     | [job] validate thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:23,000 | INFO     | [job] control thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:23,018 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:23,020 | INFO     | [payload] failed_post thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:23,131 | INFO     | [payload] validate_post thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:23,189 | INFO     | [data] copytool_out thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:23,211 | INFO     | [data] copytool_in thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:24,785 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 02:32:11] 2025-11-22 07:31:51,868 | INFO     | PID=18873 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 02:32:11] 2025-11-22 07:31:51,869 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 02:32:11] 2025-11-22 07:31:51,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 02:32:11] 2025-11-22 07:31:51,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 02:32:11] 2025-11-22 07:32:04,960 | INFO     | [monitor] cgroup control has ended
[2025-11-22 02:32:11] 2025-11-22 07:32:06,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411219179328)>', '<ExcThread(monitor, started 140410617829120)>']
[2025-11-22 02:32:11] 2025-11-22 07:32:06,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 02:32:11] 2025-11-22 07:32:06,940 | INFO     | [monitor] control thread has ended
[2025-11-22 02:32:11] 2025-11-22 07:32:11,248 | INFO     | all workflow threads have been joined
[2025-11-22 02:32:11] 2025-11-22 07:32:11,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 02:32:11] 2025-11-22 07:32:11,248 | INFO     | traces error code: 0
[2025-11-22 02:32:11] 2025-11-22 07:32:11,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 02:32:11] 2025-11-22 07:32:11,351 [wrapper] ==== pilot stdout END ====
[2025-11-22 02:32:11] 2025-11-22 07:32:11,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 02:32:11] 2025-11-22 07:32:11,359 [wrapper] pilotpid: 18873
[2025-11-22 02:32:11] 2025-11-22 07:32:11,362 [wrapper] Pilot exit status: 0
[2025-11-22 02:32:11] 2025-11-22 07:32:11,376 [wrapper] pandaids: 6894270935
[2025-11-22 02:32:11] 2025-11-22 07:32:11,421 [wrapper] cleanup supervisor_pilot 10696 18874
[2025-11-22 02:32:11] 2025-11-22 07:32:11,426 [wrapper] Test setup, not cleaning
[2025-11-22 02:32:11] 2025-11-22 07:32:11,430 [wrapper] apfmon messages muted
[2025-11-22 02:32:11] 2025-11-22 07:32:11,433 [wrapper] ==== wrapper stdout END ====
[2025-11-22 02:32:11] 2025-11-22 07:32:11,437 [wrapper] ==== wrapper stderr END ====
[2025-11-22 02:32:11]  *** Error codes and diagnostics ***
[2025-11-22 02:32:11]     "exeErrorCode": 0,
[2025-11-22 02:32:11]     "exeErrorDiag": "",
[2025-11-22 02:32:11]     "pilotErrorCode": 0,
[2025-11-22 02:32:11]     "pilotErrorDiag": "",
[2025-11-22 02:32:11]  *** Listing of results directory ***
[2025-11-22 02:32:11] total 1296840
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 02:07 pilot3.tar.gz
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 02:10 queuedata.json
[2025-11-22 02:32:11] -rwx------ 1 boincer umatlas     36292 Nov 21 02:10 runpilot2-wrapper.sh
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas       100 Nov 21 19:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 02:32:11] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 19:32 run_atlas
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas       105 Nov 21 19:32 job.xml
[2025-11-22 02:32:11] -rw-r--r-- 2 boincer umatlas 409054317 Nov 21 19:32 EVNT.47493127._002291.pool.root.1
[2025-11-22 02:32:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 19:32 start_atlas.sh
[2025-11-22 02:32:11] drwxrwx--x 2 boincer umatlas      4096 Nov 21 19:32 shared
[2025-11-22 02:32:11] -rw-r--r-- 2 boincer umatlas    590100 Nov 21 19:32 input.tar.gz
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas         0 Nov 21 19:32 boinc_lockfile
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas      2785 Nov 21 19:32 pandaJob.out
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas        57 Nov 21 19:32 setup.sh.local
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas    989798 Nov 21 19:32 agis_schedconf.cvmfs.json
[2025-11-22 02:32:11] drwx------ 5 boincer umatlas      4096 Nov 21 19:32 pilot3
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas       532 Nov 22 02:20 boinc_task_state.xml
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 02:28 init_data.xml
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas 903611515 Nov 22 02:30 HITS.47533967._002626.pool.root.1
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas      1064 Nov 22 02:31 memory_monitor_summary.json
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas   1526164 Nov 22 02:31 agis_ddmendpoints.agis.ALL.json
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas   2171754 Nov 22 02:31 log.47533967._002626.job.log.tgz.1
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas      8679 Nov 22 02:31 heartbeat.json
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas        95 Nov 22 02:31 pilot_heartbeat.json
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas        29 Nov 22 02:32 wrapper_checkpoint.txt
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 02:32 boinc_mmap_file
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas      4932 Nov 22 02:32 pilotlog.txt
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas   3517119 Nov 22 02:32 log.47533967._002626.job.log.1
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas       353 Nov 22 02:32 output.list
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas       620 Nov 22 02:32 runtime_log
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas   5703680 Nov 22 02:32 result.tar.gz
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas      9340 Nov 22 02:32 runtime_log.err
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas       669 Nov 22 02:32 KwPKDmNTag8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuAJKDmwrMWon.diag
[2025-11-22 02:32:11] -rw-r--r-- 1 boincer umatlas     21301 Nov 22 02:32 stderr.txt
[2025-11-22 02:32:11] HITS file was successfully produced:
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas 903611515 Nov 22 02:30 shared/HITS.pool.root.1
[2025-11-22 02:32:11]  *** Contents of shared directory: ***
[2025-11-22 02:32:11] total 1288076
[2025-11-22 02:32:11] -rw-r--r-- 2 boincer umatlas 409054317 Nov 21 19:32 ATLAS.root_0
[2025-11-22 02:32:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 19:32 start_atlas.sh
[2025-11-22 02:32:11] -rw-r--r-- 2 boincer umatlas    590100 Nov 21 19:32 input.tar.gz
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas 903611515 Nov 22 02:30 HITS.pool.root.1
[2025-11-22 02:32:11] -rw------- 1 boincer umatlas   5703680 Nov 22 02:32 result.tar.gz
02:32:13 (15162): run_atlas exited; CPU time 280921.541019
02:32:13 (15162): called boinc_finish(0)

</stderr_txt>
]]>

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