Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:02 (22065): wrapper (7.7.26015): starting
19:02:02 (22065): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 19:02:02] Arguments: --nthreads 8
[2025-11-21 19:02:02] Threads: 8
[2025-11-21 19:02:02] Checking for CVMFS
[2025-11-21 19:02:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 19:02:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 19:02:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 19:02:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 19:02:03] 2.11.2.0 2989 66795 83424 153152 1 81 19167593 20275201 1 130560 0 18792670 99.878 3545867 29044 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 19:02:03] CVMFS is ok
[2025-11-21 19:02:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 19:02:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 19:02:03] Further information can be found at the LHC@home message board.
[2025-11-21 19:02:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 19:02:03] Checking for apptainer binary...
[2025-11-21 19:02:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 19:02:03] Running /usr/bin/apptainer --version
[2025-11-21 19:02:03] apptainer version 1.3.2-1.el7
[2025-11-21 19:02:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 19:02:05] c-204-24.aglt2.org
[2025-11-21 19:02:05] apptainer works
[2025-11-21 19:02:05] Set ATHENA_PROC_NUMBER=8
[2025-11-21 19:02:05] Set ATHENA_CORE_NUMBER=8
[2025-11-21 19:02:05] Starting ATLAS job with PandaID=6894270915
[2025-11-21 19:02:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 07:37:54]  *** The last 200 lines of the pilot log: ***
[2025-11-22 07:37:54] 2025-11-22 12:37:20,503 | INFO     | monitor loop #3337: job 0:6894270915 is in state 'finished'
[2025-11-22 07:37:54] 2025-11-22 12:37:20,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 07:37:54] 2025-11-22 12:37:20,777 | INFO     | time since job start (45297s) is within the limit (172800.0s)
[2025-11-22 07:37:54] 2025-11-22 12:37:21,938 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 07:37:54] 2025-11-22 12:37:21,941 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-22 07:37:54] 2025-11-22 12:37:21,943 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894270915/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 07:37:54] 2025-11-22 12:37:21,944 | INFO     | extracted standard info from prmon json
[2025-11-22 07:37:54] 2025-11-22 12:37:21,944 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 07:37:54] 2025-11-22 12:37:21,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 07:37:54] 2025-11-22 12:37:21,957 | INFO     | fitting pss+swap vs Time
[2025-11-22 07:37:54] 2025-11-22 12:37:21,957 | INFO     | sum of square deviations: 126674039997.3491
[2025-11-22 07:37:54] 2025-11-22 12:37:21,969 | INFO     | sum of deviations: 929193076758.9716
[2025-11-22 07:37:54] 2025-11-22 12:37:21,969 | INFO     | mean x: 1763792377.04717
[2025-11-22 07:37:54] 2025-11-22 12:37:21,969 | INFO     | mean y: 2869886.9150943398
[2025-11-22 07:37:54] 2025-11-22 12:37:21,969 | INFO     | intersect: -12935090137.307524
[2025-11-22 07:37:54] 2025-11-22 12:37:21,970 | INFO     | chi2: 4.936952381562933
[2025-11-22 07:37:54] 2025-11-22 12:37:21,971 | INFO     | sum of square deviations: 124130571948.34215
[2025-11-22 07:37:54] 2025-11-22 12:37:21,982 | INFO     | sum of deviations: 1154026208894.5024
[2025-11-22 07:37:54] 2025-11-22 12:37:21,982 | INFO     | mean x: 1763792224.5508819
[2025-11-22 07:37:54] 2025-11-22 12:37:21,982 | INFO     | mean y: 2883361.9199457257
[2025-11-22 07:37:54] 2025-11-22 12:37:21,982 | INFO     | intersect: -16394869602.781834
[2025-11-22 07:37:54] 2025-11-22 12:37:21,983 | INFO     | chi2: 2.2524785573466284
[2025-11-22 07:37:54] 2025-11-22 12:37:21,983 | INFO     | current chi2=2.2524785573466284 (change=54.375120858801104 %)
[2025-11-22 07:37:54] 2025-11-22 12:37:21,984 | INFO     | sum of square deviations: 121621249107.12987
[2025-11-22 07:37:54] 2025-11-22 12:37:21,995 | INFO     | sum of deviations: 1162612328521.4001
[2025-11-22 07:37:54] 2025-11-22 12:37:21,995 | INFO     | mean x: 1763792072.0505464
[2025-11-22 07:37:54] 2025-11-22 12:37:21,996 | INFO     | mean y: 2883877.12431694
[2025-11-22 07:37:54] 2025-11-22 12:37:21,996 | INFO     | intersect: -16857709341.318932
[2025-11-22 07:37:54] 2025-11-22 12:37:21,997 | INFO     | chi2: 2.1686506376739367
[2025-11-22 07:37:54] 2025-11-22 12:37:21,997 | INFO     | current chi2=2.1686506376739367 (change=3.7215856905398983 %)
[2025-11-22 07:37:54] 2025-11-22 12:37:21,997 | INFO     | right removable region: 731
[2025-11-22 07:37:54] 2025-11-22 12:37:21,998 | INFO     | sum of square deviations: 124130324288.34209
[2025-11-22 07:37:54] 2025-11-22 12:37:22,009 | INFO     | sum of deviations: 739907716615.9019
[2025-11-22 07:37:54] 2025-11-22 12:37:22,009 | INFO     | mean x: 1763792529.5508819
[2025-11-22 07:37:54] 2025-11-22 12:37:22,009 | INFO     | mean y: 2881215.842605156
[2025-11-22 07:37:54] 2025-11-22 12:37:22,009 | INFO     | intersect: -10510615068.052498
[2025-11-22 07:37:54] 2025-11-22 12:37:22,010 | INFO     | chi2: 2.9819171748639235
[2025-11-22 07:37:54] 2025-11-22 12:37:22,010 | INFO     | current chi2=2.9819171748639235 (change=39.6000417990681 %)
[2025-11-22 07:37:54] 2025-11-22 12:37:22,011 | INFO     | sum of square deviations: 121620978206.02725
[2025-11-22 07:37:54] 2025-11-22 12:37:22,022 | INFO     | sum of deviations: 696621570573.874
[2025-11-22 07:37:54] 2025-11-22 12:37:22,022 | INFO     | mean x: 1763792682.0519125
[2025-11-22 07:37:54] 2025-11-22 12:37:22,023 | INFO     | mean y: 2883845.161202186
[2025-11-22 07:37:54] 2025-11-22 12:37:22,023 | INFO     | intersect: -10099781389.583782
[2025-11-22 07:37:54] 2025-11-22 12:37:22,023 | INFO     | chi2: 2.9441865860460634
[2025-11-22 07:37:54] 2025-11-22 12:37:22,024 | INFO     | current chi2=2.9441865860460634 (change=1.2653131058068996 %)
[2025-11-22 07:37:54] 2025-11-22 12:37:22,024 | INFO     | left removable region: 20
[2025-11-22 07:37:54] 2025-11-22 12:37:22,024 | INFO     | sum of square deviations: 111451021783.32777
[2025-11-22 07:37:54] 2025-11-22 12:37:22,035 | INFO     | sum of deviations: 849900052486.8103
[2025-11-22 07:37:54] 2025-11-22 12:37:22,035 | INFO     | mean x: 1763792651.5583684
[2025-11-22 07:37:54] 2025-11-22 12:37:22,035 | INFO     | mean y: 2903008.594936709
[2025-11-22 07:37:54] 2025-11-22 12:37:22,035 | INFO     | intersect: -13447377151.685781
[2025-11-22 07:37:54] 2025-11-22 12:37:22,036 | INFO     | chi2: 0.11428117762008203
[2025-11-22 07:37:54] 2025-11-22 12:37:22,036 | INFO     | current memory leak: 7.63 B/s (using 711 data points, chi2=0.11)
[2025-11-22 07:37:54] 2025-11-22 12:37:22,037 | INFO     | could have reported an average CPU frequency of 2172 MHz (28 samples)
[2025-11-22 07:37:54] 2025-11-22 12:37:22,037 | INFO     | ..............................
[2025-11-22 07:37:54] 2025-11-22 12:37:22,037 | INFO     | . Timing measurements:
[2025-11-22 07:37:54] 2025-11-22 12:37:22,037 | INFO     | . get job = 0 s
[2025-11-22 07:37:54] 2025-11-22 12:37:22,037 | INFO     | . initial setup = 2 s
[2025-11-22 07:37:54] 2025-11-22 12:37:22,038 | INFO     | . payload setup = 9 s
[2025-11-22 07:37:54] 2025-11-22 12:37:22,038 | INFO     | . stage-in = 0 s
[2025-11-22 07:37:54] 2025-11-22 12:37:22,038 | INFO     | . payload execution = 45256 s
[2025-11-22 07:37:54] 2025-11-22 12:37:22,038 | INFO     | . stage-out = 4 s
[2025-11-22 07:37:54] 2025-11-22 12:37:22,038 | INFO     | . log creation = 0 s
[2025-11-22 07:37:54] 2025-11-22 12:37:22,038 | INFO     | ..............................
[2025-11-22 07:37:54] 2025-11-22 12:37:22,271 | INFO     | 
[2025-11-22 07:37:54] 2025-11-22 12:37:22,271 | INFO     | job summary report
[2025-11-22 07:37:54] 2025-11-22 12:37:22,271 | INFO     | --------------------------------------------------
[2025-11-22 07:37:54] 2025-11-22 12:37:22,271 | INFO     | PanDA job id: 6894270915
[2025-11-22 07:37:54] 2025-11-22 12:37:22,272 | INFO     | task id: 47533967
[2025-11-22 07:37:54] 2025-11-22 12:37:22,272 | INFO     | errors: (none)
[2025-11-22 07:37:54] 2025-11-22 12:37:22,272 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 07:37:54] 2025-11-22 12:37:22,272 | INFO     | pilot state: finished 
[2025-11-22 07:37:54] 2025-11-22 12:37:22,272 | INFO     | transexitcode: 0
[2025-11-22 07:37:54] 2025-11-22 12:37:22,272 | INFO     | exeerrorcode: 0
[2025-11-22 07:37:54] 2025-11-22 12:37:22,273 | INFO     | exeerrordiag: 
[2025-11-22 07:37:54] 2025-11-22 12:37:22,273 | INFO     | exitcode: 0
[2025-11-22 07:37:54] 2025-11-22 12:37:22,273 | INFO     | exitmsg: OK
[2025-11-22 07:37:54] 2025-11-22 12:37:22,273 | INFO     | cpuconsumptiontime: 351421 s
[2025-11-22 07:37:54] 2025-11-22 12:37:22,273 | INFO     | nevents: 1000
[2025-11-22 07:37:54] 2025-11-22 12:37:22,273 | INFO     | neventsw: 0
[2025-11-22 07:37:54] 2025-11-22 12:37:22,274 | INFO     | pid: 32184
[2025-11-22 07:37:54] 2025-11-22 12:37:22,274 | INFO     | pgrp: 32184
[2025-11-22 07:37:54] 2025-11-22 12:37:22,274 | INFO     | corecount: 8
[2025-11-22 07:37:54] 2025-11-22 12:37:22,274 | INFO     | event service: False
[2025-11-22 07:37:54] 2025-11-22 12:37:22,274 | INFO     | sizes: {0: 2297979, 1: 2298835, 7: 2299097, 12: 2299125, 45268: 2345191, 45274: 2354185, 45275: 2354369, 45281: 2354615}
[2025-11-22 07:37:54] 2025-11-22 12:37:22,274 | INFO     | --------------------------------------------------
[2025-11-22 07:37:54] 2025-11-22 12:37:22,275 | INFO     | 
[2025-11-22 07:37:54] 2025-11-22 12:37:22,275 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 07:37:54] 2025-11-22 12:37:22,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,307 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,308 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,308 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 07:37:54] 2025-11-22 12:37:22,308 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 07:37:54] 2025-11-22 12:37:22,309 | INFO     | job 6894270915 has completed (purged errors)
[2025-11-22 07:37:54] 2025-11-22 12:37:22,309 | INFO     | overall cleanup function is called
[2025-11-22 07:37:54] 2025-11-22 12:37:23,325 | INFO     | --- collectZombieJob: --- 10, [32184]
[2025-11-22 07:37:54] 2025-11-22 12:37:23,325 | INFO     | zombie collector waiting for pid 32184
[2025-11-22 07:37:54] 2025-11-22 12:37:23,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 07:37:54] 2025-11-22 12:37:23,326 | INFO     | collected zombie processes
[2025-11-22 07:37:54] 2025-11-22 12:37:23,326 | INFO     | will attempt to kill all subprocesses of pid=32184
[2025-11-22 07:37:54] 2025-11-22 12:37:23,414 | INFO     | process IDs to be killed: [32184] (in reverse order)
[2025-11-22 07:37:54] 2025-11-22 12:37:23,475 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 07:37:54] 2025-11-22 12:37:23,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 07:37:54] 2025-11-22 12:37:23,480 | INFO     | did not find any defunct processes belonging to 32184
[2025-11-22 07:37:54] 2025-11-22 12:37:23,483 | INFO     | did not find any defunct processes belonging to 32184
[2025-11-22 07:37:54] 2025-11-22 12:37:23,486 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 07:37:54] 2025-11-22 12:37:23,486 | INFO     | ready for new job
[2025-11-22 07:37:54] 2025-11-22 12:37:23,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 07:37:54] 2025-11-22 12:37:23,491 | INFO     | ***************************************
[2025-11-22 07:37:54] 2025-11-22 12:37:23,491 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 07:37:54] 2025-11-22 12:37:23,491 | INFO     | ***************************************
[2025-11-22 07:37:54] 2025-11-22 12:37:23,491 | INFO     | 
[2025-11-22 07:37:54] 2025-11-22 12:37:23,492 | INFO     | architecture information:
[2025-11-22 07:37:54] 2025-11-22 12:37:23,493 | INFO     | executing command: cat /etc/os-release
[2025-11-22 07:37:54] 2025-11-22 12:37:23,511 | INFO     | cat /etc/os-release:
[2025-11-22 07:37:54] NAME="CentOS Linux"
[2025-11-22 07:37:54] VERSION="7 (Core)"
[2025-11-22 07:37:54] ID="centos"
[2025-11-22 07:37:54] ID_LIKE="rhel fedora"
[2025-11-22 07:37:54] VERSION_ID="7"
[2025-11-22 07:37:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 07:37:54] ANSI_COLOR="0;31"
[2025-11-22 07:37:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 07:37:54] HOME_URL="https://www.centos.org/"
[2025-11-22 07:37:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 07:37:54] 
[2025-11-22 07:37:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 07:37:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 07:37:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 07:37:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 07:37:54] 
[2025-11-22 07:37:54] 2025-11-22 12:37:23,511 | INFO     | ***************************************
[2025-11-22 07:37:54] 2025-11-22 12:37:24,012 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 07:37:54] 2025-11-22 12:37:24,035 | INFO     | sufficient remaining disk space (17604542464 B)
[2025-11-22 07:37:54] 2025-11-22 12:37:24,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 07:37:54] 2025-11-22 12:37:24,036 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 07:37:54] 2025-11-22 12:37:24,036 | INFO     | update_server=False
[2025-11-22 07:37:54] 2025-11-22 12:37:24,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 07:37:54] 2025-11-22 12:37:24,036 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:37:54] 2025-11-22 12:37:24,037 | INFO     | aborting loop
[2025-11-22 07:37:54] 2025-11-22 12:37:24,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:37:54] 2025-11-22 12:37:24,130 | INFO     | all data control threads have been joined
[2025-11-22 07:37:54] 2025-11-22 12:37:24,737 | INFO     | all job control threads have been joined
[2025-11-22 07:37:54] 2025-11-22 12:37:25,042 | INFO     | [job] retrieve thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:25,042 | INFO     | [job] job monitor thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:25,043 | INFO     | [job] queue monitor thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:25,136 | INFO     | [data] control thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:25,168 | INFO     | [data] copytool_in thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:25,326 | INFO     | [payload] failed_post thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:25,411 | INFO     | all payload control threads have been joined
[2025-11-22 07:37:54] 2025-11-22 12:37:25,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 07:37:54] 2025-11-22 12:37:25,725 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:25,740 | INFO     | [job] control thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:25,853 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:26,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 07:37:54] 2025-11-22 12:37:26,067 | INFO     | [job] validate thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:26,315 | INFO     | [payload] validate_post thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:26,417 | INFO     | [payload] control thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:26,517 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:27,424 | INFO     | [data] copytool_out thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:30,046 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:34,662 | INFO     | job.realtimelogging is not enabled
[2025-11-22 07:37:54] 2025-11-22 12:37:35,667 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 07:37:54] 2025-11-22 12:37:38,063 | INFO     | [monitor] cgroup control has ended
[2025-11-22 07:37:54] 2025-11-22 12:37:38,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140484267435840)>', '<ExcThread(monitor, started 140483573556992)>']
[2025-11-22 07:37:54] 2025-11-22 12:37:43,994 | INFO     | all workflow threads have been joined
[2025-11-22 07:37:54] 2025-11-22 12:37:43,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 07:37:54] 2025-11-22 12:37:43,995 | INFO     | traces error code: 0
[2025-11-22 07:37:54] 2025-11-22 12:37:43,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 07:37:54] 2025-11-22 12:37:53,980 | INFO     | PID=25744 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 07:37:54] 2025-11-22 12:37:53,981 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 07:37:54] 2025-11-22 12:37:53,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 07:37:54] 2025-11-22 12:37:53,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 07:37:54] 2025-11-22 12:37:53,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 07:37:54] 2025-11-22 12:37:53,981 | INFO     | [monitor] control thread has ended
[2025-11-22 07:37:54] 2025-11-22 12:37:54,092 [wrapper] ==== pilot stdout END ====
[2025-11-22 07:37:54] 2025-11-22 12:37:54,097 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 07:37:54] 2025-11-22 12:37:54,101 [wrapper] pilotpid: 25744
[2025-11-22 07:37:54] 2025-11-22 12:37:54,106 [wrapper] Pilot exit status: 0
[2025-11-22 07:37:54] 2025-11-22 12:37:54,122 [wrapper] pandaids: 6894270915
[2025-11-22 07:37:54] 2025-11-22 12:37:54,166 [wrapper] cleanup supervisor_pilot 12737 25745
[2025-11-22 07:37:54] 2025-11-22 12:37:54,171 [wrapper] Test setup, not cleaning
[2025-11-22 07:37:54] 2025-11-22 12:37:54,176 [wrapper] apfmon messages muted
[2025-11-22 07:37:54] 2025-11-22 12:37:54,181 [wrapper] ==== wrapper stdout END ====
[2025-11-22 07:37:54] 2025-11-22 12:37:54,185 [wrapper] ==== wrapper stderr END ====
[2025-11-22 07:37:54]  *** Error codes and diagnostics ***
[2025-11-22 07:37:54]     "exeErrorCode": 0,
[2025-11-22 07:37:54]     "exeErrorDiag": "",
[2025-11-22 07:37:54]     "pilotErrorCode": 0,
[2025-11-22 07:37:54]     "pilotErrorDiag": "",
[2025-11-22 07:37:54]  *** Listing of results directory ***
[2025-11-22 07:37:54] total 1307356
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 02:02 pilot3.tar.gz
[2025-11-22 07:37:54] -rwx------ 1 boincer umatlas     36292 Nov 21 02:05 runpilot2-wrapper.sh
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 02:05 queuedata.json
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas       100 Nov 21 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 07:37:54] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 19:01 run_atlas
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas       105 Nov 21 19:01 job.xml
[2025-11-22 07:37:54] -rw-r--r-- 2 boincer umatlas 408441343 Nov 21 19:02 EVNT.47493127._002289.pool.root.1
[2025-11-22 07:37:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 19:02 start_atlas.sh
[2025-11-22 07:37:54] drwxrwx--x 2 boincer umatlas      4096 Nov 21 19:02 shared
[2025-11-22 07:37:54] -rw-r--r-- 2 boincer umatlas    590100 Nov 21 19:02 input.tar.gz
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas         0 Nov 21 19:02 boinc_lockfile
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas      2786 Nov 21 19:02 pandaJob.out
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas        57 Nov 21 19:02 setup.sh.local
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas    989798 Nov 21 19:02 agis_schedconf.cvmfs.json
[2025-11-22 07:37:54] drwx------ 5 boincer umatlas      4096 Nov 21 19:02 pilot3
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas       533 Nov 22 07:29 boinc_task_state.xml
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 07:31 init_data.xml
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas 909899631 Nov 22 07:36 HITS.47533967._002606.pool.root.1
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas      1064 Nov 22 07:37 memory_monitor_summary.json
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas   1526164 Nov 22 07:37 agis_ddmendpoints.agis.ALL.json
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas   1986809 Nov 22 07:37 log.47533967._002606.job.log.tgz.1
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas      8659 Nov 22 07:37 heartbeat.json
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 07:37 boinc_mmap_file
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas        29 Nov 22 07:37 wrapper_checkpoint.txt
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas       745 Nov 22 07:37 pilotlog.txt
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas        95 Nov 22 07:37 pilot_heartbeat.json
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas   6245176 Nov 22 07:37 log.47533967._002606.job.log.1
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas       353 Nov 22 07:37 output.list
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas       620 Nov 22 07:37 runtime_log
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas   8253440 Nov 22 07:37 result.tar.gz
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas       668 Nov 22 07:37 vTiKDmQOag8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVAJKDmbowjln.diag
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 07:37 runtime_log.err
[2025-11-22 07:37:54] -rw-r--r-- 1 boincer umatlas     21294 Nov 22 07:37 stderr.txt
[2025-11-22 07:37:54] HITS file was successfully produced:
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas 909899631 Nov 22 07:36 shared/HITS.pool.root.1
[2025-11-22 07:37:54]  *** Contents of shared directory: ***
[2025-11-22 07:37:54] total 1296112
[2025-11-22 07:37:54] -rw-r--r-- 2 boincer umatlas 408441343 Nov 21 19:02 ATLAS.root_0
[2025-11-22 07:37:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 19:02 start_atlas.sh
[2025-11-22 07:37:54] -rw-r--r-- 2 boincer umatlas    590100 Nov 21 19:02 input.tar.gz
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas 909899631 Nov 22 07:36 HITS.pool.root.1
[2025-11-22 07:37:54] -rw------- 1 boincer umatlas   8253440 Nov 22 07:37 result.tar.gz
07:37:55 (22065): run_atlas exited; CPU time 347399.210968
07:37:55 (22065): called boinc_finish(0)

</stderr_txt>
]]>

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