Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:01:25 (1372919): wrapper (7.7.26015): starting
09:01:25 (1372919): wrapper: running run_atlas (--nthreads 2)
[2025-11-26 09:01:25] Arguments: --nthreads 2
[2025-11-26 09:01:25] Threads: 2
[2025-11-26 09:01:25] Checking for CVMFS
[2025-11-26 09:01:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:01:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:01:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:01:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:01:26] 2.9.2.0 87922 11026 59260 153314 0 81 30441489 36864000 0 130560 0 3538300 99.844 660469 8622 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 09:01:26] CVMFS is ok
[2025-11-26 09:01:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:01:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:01:26] Further information can be found at the LHC@home message board.
[2025-11-26 09:01:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:01:26] Checking for apptainer binary...
[2025-11-26 09:01:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:01:26] Running /usr/bin/apptainer --version
[2025-11-26 09:01:26] apptainer version 1.4.1-1.1
[2025-11-26 09:01:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:01:26] thA354
[2025-11-26 09:01:26] apptainer works
[2025-11-26 09:01:26] Set ATHENA_PROC_NUMBER=2
[2025-11-26 09:01:26] Set ATHENA_CORE_NUMBER=2
[2025-11-26 09:01:26] Starting ATLAS job with PandaID=6894245549
[2025-11-26 09:01:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:02:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:02:43] 2025-11-26 20:02:15,347 | INFO     | time since job start (43235s) is within the limit (172800.0s)
[2025-11-26 21:02:43] 2025-11-26 20:02:16,325 | INFO     | monitor loop #3300: job 0:6894245549 is in state 'finished'
[2025-11-26 21:02:43] 2025-11-26 20:02:16,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:02:43] 2025-11-26 20:02:16,886 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 21:02:43] 2025-11-26 20:02:16,886 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4600.84325
[2025-11-26 21:02:43] 2025-11-26 20:02:16,887 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894245549/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:02:43] 2025-11-26 20:02:16,887 | INFO     | extracted standard info from prmon json
[2025-11-26 21:02:43] 2025-11-26 20:02:16,887 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:02:43] 2025-11-26 20:02:16,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:02:43] 2025-11-26 20:02:16,891 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:02:43] 2025-11-26 20:02:16,892 | INFO     | sum of square deviations: 110513737210.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,896 | INFO     | sum of deviations: 255345489918.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,896 | INFO     | mean x: 1764165722.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,896 | INFO     | mean y: 2016506.562764457
[2025-11-26 21:02:43] 2025-11-26 20:02:16,896 | INFO     | intersect: -4074144267.2298946
[2025-11-26 21:02:43] 2025-11-26 20:02:16,896 | INFO     | chi2: 3.8997042305870426
[2025-11-26 21:02:43] 2025-11-26 20:02:16,896 | INFO     | sum of square deviations: 108192093680.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,901 | INFO     | sum of deviations: 349937956898.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,901 | INFO     | mean x: 1764165569.5
[2025-11-26 21:02:43] 2025-11-26 20:02:16,901 | INFO     | mean y: 2022701.8920454546
[2025-11-26 21:02:43] 2025-11-26 20:02:16,901 | INFO     | intersect: -5704018044.916679
[2025-11-26 21:02:43] 2025-11-26 20:02:16,901 | INFO     | chi2: 2.3334168162600646
[2025-11-26 21:02:43] 2025-11-26 20:02:16,901 | INFO     | current chi2=2.3334168162600646 (change=40.164261741747445 %)
[2025-11-26 21:02:43] 2025-11-26 20:02:16,901 | INFO     | sum of square deviations: 105903194950.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,905 | INFO     | sum of deviations: 347036384355.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,906 | INFO     | mean x: 1764165417.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,906 | INFO     | mean y: 2022508.529327611
[2025-11-26 21:02:43] 2025-11-26 20:02:16,906 | INFO     | intersect: -5779007875.009738
[2025-11-26 21:02:43] 2025-11-26 20:02:16,906 | INFO     | chi2: 2.332465809090914
[2025-11-26 21:02:43] 2025-11-26 20:02:16,906 | INFO     | current chi2=2.332465809090914 (change=0.04075599192239475 %)
[2025-11-26 21:02:43] 2025-11-26 20:02:16,906 | INFO     | right removable region: 698
[2025-11-26 21:02:43] 2025-11-26 20:02:16,906 | INFO     | sum of square deviations: 108192093680.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,910 | INFO     | sum of deviations: 123877152481.49991
[2025-11-26 21:02:43] 2025-11-26 20:02:16,911 | INFO     | mean x: 1764165874.5
[2025-11-26 21:02:43] 2025-11-26 20:02:16,911 | INFO     | mean y: 2025132.7457386365
[2025-11-26 21:02:43] 2025-11-26 20:02:16,911 | INFO     | intersect: -2017899222.2119434
[2025-11-26 21:02:43] 2025-11-26 20:02:16,911 | INFO     | chi2: 1.8981607613019862
[2025-11-26 21:02:43] 2025-11-26 20:02:16,911 | INFO     | current chi2=1.8981607613019862 (change=51.32551985830356 %)
[2025-11-26 21:02:43] 2025-11-26 20:02:16,911 | INFO     | sum of square deviations: 105903194950.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,915 | INFO     | sum of deviations: 89073718229.00003
[2025-11-26 21:02:43] 2025-11-26 20:02:16,915 | INFO     | mean x: 1764166027.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,915 | INFO     | mean y: 2027442.9570815451
[2025-11-26 21:02:43] 2025-11-26 20:02:16,915 | INFO     | intersect: -1481788297.1852555
[2025-11-26 21:02:43] 2025-11-26 20:02:16,916 | INFO     | chi2: 1.6512058841562292
[2025-11-26 21:02:43] 2025-11-26 20:02:16,916 | INFO     | current chi2=1.6512058841562292 (change=13.01021927017213 %)
[2025-11-26 21:02:43] 2025-11-26 20:02:16,916 | INFO     | left removable region: 20
[2025-11-26 21:02:43] 2025-11-26 20:02:16,916 | INFO     | sum of square deviations: 96642145029.5
[2025-11-26 21:02:43] 2025-11-26 20:02:16,920 | INFO     | sum of deviations: 158584596524.0
[2025-11-26 21:02:43] 2025-11-26 20:02:16,920 | INFO     | mean x: 1764165996.5
[2025-11-26 21:02:43] 2025-11-26 20:02:16,920 | INFO     | mean y: 2035286.0943952803
[2025-11-26 21:02:43] 2025-11-26 20:02:16,920 | INFO     | intersect: -2892866856.970758
[2025-11-26 21:02:43] 2025-11-26 20:02:16,920 | INFO     | chi2: 0.056572649568927116
[2025-11-26 21:02:43] 2025-11-26 20:02:16,920 | INFO     | current memory leak: 1.64 B/s (using 678 data points, chi2=0.06)
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | could have reported an average CPU frequency of 4567 MHz (27 samples)
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | ..............................
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | . Timing measurements:
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | . get job = 0 s
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | . initial setup = 1 s
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | . payload setup = 7 s
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | . stage-in = 0 s
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | . payload execution = 43197 s
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | . stage-out = 0 s
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | . log creation = 0 s
[2025-11-26 21:02:43] 2025-11-26 20:02:16,921 | INFO     | ..............................
[2025-11-26 21:02:43] 2025-11-26 20:02:17,352 | INFO     | time since job start (43237s) is within the limit (172800.0s)
[2025-11-26 21:02:43] 2025-11-26 20:02:17,448 | INFO     | 
[2025-11-26 21:02:43] 2025-11-26 20:02:17,448 | INFO     | job summary report
[2025-11-26 21:02:43] 2025-11-26 20:02:17,449 | INFO     | --------------------------------------------------
[2025-11-26 21:02:43] 2025-11-26 20:02:17,449 | INFO     | PanDA job id: 6894245549
[2025-11-26 21:02:43] 2025-11-26 20:02:17,449 | INFO     | task id: 47533967
[2025-11-26 21:02:43] 2025-11-26 20:02:17,449 | INFO     | errors: (none)
[2025-11-26 21:02:43] 2025-11-26 20:02:17,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:02:43] 2025-11-26 20:02:17,449 | INFO     | pilot state: finished 
[2025-11-26 21:02:43] 2025-11-26 20:02:17,450 | INFO     | transexitcode: 0
[2025-11-26 21:02:43] 2025-11-26 20:02:17,450 | INFO     | exeerrorcode: 0
[2025-11-26 21:02:43] 2025-11-26 20:02:17,450 | INFO     | exeerrordiag: 
[2025-11-26 21:02:43] 2025-11-26 20:02:17,450 | INFO     | exitcode: 0
[2025-11-26 21:02:43] 2025-11-26 20:02:17,450 | INFO     | exitmsg: OK
[2025-11-26 21:02:43] 2025-11-26 20:02:17,450 | INFO     | cpuconsumptiontime: 85553 s
[2025-11-26 21:02:43] 2025-11-26 20:02:17,451 | INFO     | nevents: 1000
[2025-11-26 21:02:43] 2025-11-26 20:02:17,451 | INFO     | neventsw: 0
[2025-11-26 21:02:43] 2025-11-26 20:02:17,451 | INFO     | pid: 1383046
[2025-11-26 21:02:43] 2025-11-26 20:02:17,451 | INFO     | pgrp: 1383046
[2025-11-26 21:02:43] 2025-11-26 20:02:17,451 | INFO     | corecount: 2
[2025-11-26 21:02:43] 2025-11-26 20:02:17,451 | INFO     | event service: False
[2025-11-26 21:02:43] 2025-11-26 20:02:17,451 | INFO     | sizes: {0: 2284316, 7: 2284578, 10: 2284606, 43209: 2330198, 43210: 2339198, 43211: 2339254, 43219: 2339628}
[2025-11-26 21:02:43] 2025-11-26 20:02:17,451 | INFO     | --------------------------------------------------
[2025-11-26 21:02:43] 2025-11-26 20:02:17,452 | INFO     | 
[2025-11-26 21:02:43] 2025-11-26 20:02:17,452 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,463 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | job 6894245549 has completed (purged errors)
[2025-11-26 21:02:43] 2025-11-26 20:02:17,464 | INFO     | overall cleanup function is called
[2025-11-26 21:02:43] 2025-11-26 20:02:18,471 | INFO     | --- collectZombieJob: --- 10, [1383046]
[2025-11-26 21:02:43] 2025-11-26 20:02:18,472 | INFO     | zombie collector waiting for pid 1383046
[2025-11-26 21:02:43] 2025-11-26 20:02:18,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:02:43] 2025-11-26 20:02:18,472 | INFO     | collected zombie processes
[2025-11-26 21:02:43] 2025-11-26 20:02:18,472 | INFO     | will attempt to kill all subprocesses of pid=1383046
[2025-11-26 21:02:43] 2025-11-26 20:02:18,504 | INFO     | process IDs to be killed: [1383046] (in reverse order)
[2025-11-26 21:02:43] 2025-11-26 20:02:18,524 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:02:43] 2025-11-26 20:02:18,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:02:43] 2025-11-26 20:02:18,525 | INFO     | did not find any defunct processes belonging to 1383046
[2025-11-26 21:02:43] 2025-11-26 20:02:18,525 | INFO     | did not find any defunct processes belonging to 1383046
[2025-11-26 21:02:43] 2025-11-26 20:02:18,526 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:02:43] 2025-11-26 20:02:18,526 | INFO     | ready for new job
[2025-11-26 21:02:43] 2025-11-26 20:02:18,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:02:43] 2025-11-26 20:02:18,527 | INFO     | ***************************************
[2025-11-26 21:02:43] 2025-11-26 20:02:18,527 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:02:43] 2025-11-26 20:02:18,527 | INFO     | ***************************************
[2025-11-26 21:02:43] 2025-11-26 20:02:18,527 | INFO     | 
[2025-11-26 21:02:43] 2025-11-26 20:02:18,527 | INFO     | architecture information:
[2025-11-26 21:02:43] 2025-11-26 20:02:18,528 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:02:43] 2025-11-26 20:02:18,535 | INFO     | cat /etc/os-release:
[2025-11-26 21:02:43] NAME="CentOS Linux"
[2025-11-26 21:02:43] VERSION="7 (Core)"
[2025-11-26 21:02:43] ID="centos"
[2025-11-26 21:02:43] ID_LIKE="rhel fedora"
[2025-11-26 21:02:43] VERSION_ID="7"
[2025-11-26 21:02:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:02:43] ANSI_COLOR="0;31"
[2025-11-26 21:02:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:02:43] HOME_URL="https://www.centos.org/"
[2025-11-26 21:02:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:02:43] 
[2025-11-26 21:02:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:02:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:02:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:02:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:02:43] 
[2025-11-26 21:02:43] 2025-11-26 20:02:18,535 | INFO     | ***************************************
[2025-11-26 21:02:43] 2025-11-26 20:02:19,038 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 21:02:43] 2025-11-26 20:02:19,051 | INFO     | sufficient remaining disk space (489713303552 B)
[2025-11-26 21:02:43] 2025-11-26 20:02:19,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:02:43] 2025-11-26 20:02:19,051 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:02:43] 2025-11-26 20:02:19,051 | INFO     | update_server=False
[2025-11-26 21:02:43] 2025-11-26 20:02:19,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:02:43] 2025-11-26 20:02:19,052 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 21:02:43] 2025-11-26 20:02:19,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:02:43] 2025-11-26 20:02:19,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:02:43] 2025-11-26 20:02:19,052 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:02:43] 2025-11-26 20:02:19,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:02:43] 2025-11-26 20:02:19,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:02:43] 2025-11-26 20:02:19,247 | INFO     | all job control threads have been joined
[2025-11-26 21:02:43] 2025-11-26 20:02:19,360 | INFO     | all data control threads have been joined
[2025-11-26 21:02:43] 2025-11-26 20:02:19,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:02:43] 2025-11-26 20:02:19,835 | INFO     | aborting loop
[2025-11-26 21:02:43] 2025-11-26 20:02:20,057 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:20,061 | INFO     | [job] validate thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:20,187 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:20,254 | INFO     | [job] control thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:20,258 | INFO     | all payload control threads have been joined
[2025-11-26 21:02:43] 2025-11-26 20:02:20,366 | INFO     | [data] control thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:20,620 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:20,841 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:20,867 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:21,058 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:21,196 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:21,240 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:21,264 | INFO     | [payload] control thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:21,291 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:21,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:21,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:02:43] 2025-11-26 20:02:22,968 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:23,058 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:02:43] 2025-11-26 20:02:38,301 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:02:43] 2025-11-26 20:02:38,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139876960913216)>', '<ExcThread(monitor, started 139876305446656)>']
[2025-11-26 21:02:43] 2025-11-26 20:02:39,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:02:43] 2025-11-26 20:02:39,152 | INFO     | [monitor] control thread has ended
[2025-11-26 21:02:43] 2025-11-26 20:02:43,644 | INFO     | all workflow threads have been joined
[2025-11-26 21:02:43] 2025-11-26 20:02:43,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:02:43] 2025-11-26 20:02:43,645 | INFO     | traces error code: 0
[2025-11-26 21:02:43] 2025-11-26 20:02:43,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:02:43] 2025-11-26 20:02:43,687 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:02:43] 2025-11-26 20:02:43,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:02:43] 2025-11-26 20:02:43,692 [wrapper] pilotpid: 1376627
[2025-11-26 21:02:43] 2025-11-26 20:02:43,694 [wrapper] Pilot exit status: 0
[2025-11-26 21:02:43] 2025-11-26 20:02:43,699 [wrapper] pandaids: 6894245549
[2025-11-26 21:02:43] 2025-11-26 20:02:43,711 [wrapper] cleanup supervisor_pilot 1454812 1376628
[2025-11-26 21:02:43] 2025-11-26 20:02:43,713 [wrapper] Test setup, not cleaning
[2025-11-26 21:02:43] 2025-11-26 20:02:43,715 [wrapper] apfmon messages muted
[2025-11-26 21:02:43] 2025-11-26 20:02:43,717 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:02:43] 2025-11-26 20:02:43,719 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:02:43]  *** Error codes and diagnostics ***
[2025-11-26 21:02:43]     "exeErrorCode": 0,
[2025-11-26 21:02:43]     "exeErrorDiag": "",
[2025-11-26 21:02:43]     "pilotErrorCode": 0,
[2025-11-26 21:02:43]     "pilotErrorDiag": "",
[2025-11-26 21:02:43]  *** Listing of results directory ***
[2025-11-26 21:02:43] total 1312600
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc    576529 Nov 21 02:08 pilot3.tar.gz
[2025-11-26 21:02:43] -rwx------ 1 boinc boinc     36292 Nov 21 02:11 runpilot2-wrapper.sh
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc      5112 Nov 21 02:11 queuedata.json
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc       100 Nov 26 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:02:43] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 09:01 run_atlas
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc       105 Nov 26 09:01 job.xml
[2025-11-26 21:02:43] -rw-r--r-- 2 boinc boinc 408559622 Nov 26 09:01 EVNT.47493127._002074.pool.root.1
[2025-11-26 21:02:43] -rw-r--r-- 2 boinc boinc    590102 Nov 26 09:01 input.tar.gz
[2025-11-26 21:02:43] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:01 start_atlas.sh
[2025-11-26 21:02:43] drwxrwx--x 2 boinc boinc      4096 Nov 26 09:01 shared
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:01 boinc_setup_complete
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc      6207 Nov 26 09:01 init_data.xml
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:01 boinc_lockfile
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc      2785 Nov 26 09:01 pandaJob.out
[2025-11-26 21:02:43] -rw------- 1 boinc boinc    991877 Nov 26 09:01 agis_schedconf.cvmfs.json
[2025-11-26 21:02:43] drwx------ 5 boinc boinc      4096 Nov 26 09:01 pilot3
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc       531 Nov 26 20:58 boinc_task_state.xml
[2025-11-26 21:02:43] -rw------- 1 boinc boinc 917074226 Nov 26 21:01 HITS.47533967._000455.pool.root.1
[2025-11-26 21:02:43] -rw------- 1 boinc boinc        95 Nov 26 21:01 pilot_heartbeat.json
[2025-11-26 21:02:43] -rw------- 1 boinc boinc      1021 Nov 26 21:02 memory_monitor_summary.json
[2025-11-26 21:02:43] -rw------- 1 boinc boinc   1516240 Nov 26 21:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:02:43] -rw------- 1 boinc boinc   1204271 Nov 26 21:02 log.47533967._000455.job.log.tgz.1
[2025-11-26 21:02:43] -rw------- 1 boinc boinc      8559 Nov 26 21:02 heartbeat.json
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc      8192 Nov 26 21:02 boinc_mmap_file
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc        28 Nov 26 21:02 wrapper_checkpoint.txt
[2025-11-26 21:02:43] -rw------- 1 boinc boinc      4556 Nov 26 21:02 pilotlog.txt
[2025-11-26 21:02:43] -rw------- 1 boinc boinc   6067418 Nov 26 21:02 log.47533967._000455.job.log.1
[2025-11-26 21:02:43] -rw------- 1 boinc boinc       353 Nov 26 21:02 output.list
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc       620 Nov 26 21:02 runtime_log
[2025-11-26 21:02:43] -rw------- 1 boinc boinc   7290880 Nov 26 21:02 result.tar.gz
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc      8898 Nov 26 21:02 runtime_log.err
[2025-11-26 21:02:43] -rw------- 1 boinc boinc       665 Nov 26 21:02 XBQMDmHrUg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtEHKDmram5An.diag
[2025-11-26 21:02:43] -rw-r--r-- 1 boinc boinc     21176 Nov 26 21:02 stderr.txt
[2025-11-26 21:02:43] HITS file was successfully produced:
[2025-11-26 21:02:43] -rw------- 1 boinc boinc 917074226 Nov 26 21:01 shared/HITS.pool.root.1
[2025-11-26 21:02:43]  *** Contents of shared directory: ***
[2025-11-26 21:02:43] total 1302296
[2025-11-26 21:02:43] -rw-r--r-- 2 boinc boinc 408559622 Nov 26 09:01 ATLAS.root_0
[2025-11-26 21:02:43] -rw-r--r-- 2 boinc boinc    590102 Nov 26 09:01 input.tar.gz
[2025-11-26 21:02:43] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:01 start_atlas.sh
[2025-11-26 21:02:43] -rw------- 1 boinc boinc 917074226 Nov 26 21:01 HITS.pool.root.1
[2025-11-26 21:02:43] -rw------- 1 boinc boinc   7290880 Nov 26 21:02 result.tar.gz
21:02:45 (1372919): run_atlas exited; CPU time 85676.065069
21:02:45 (1372919): called boinc_finish(0)

</stderr_txt>
]]>

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