Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:58:12 (21832): wrapper (7.7.26015): starting
18:58:12 (21832): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 18:58:12] Arguments: --nthreads 12
[2025-11-21 18:58:12] Threads: 12
[2025-11-21 18:58:12] Checking for CVMFS
[2025-11-21 18:58:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 18:58:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 18:58:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 18:58:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 18:58:13] 2.11.2.0 2998 281125 94788 153152 2 81 20023045 20275201 1 130560 1 126728311 99.967 16678409 14391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 18:58:13] CVMFS is ok
[2025-11-21 18:58:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 18:58:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 18:58:13] Further information can be found at the LHC@home message board.
[2025-11-21 18:58:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 18:58:13] Checking for apptainer binary...
[2025-11-21 18:58:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 18:58:13] Running /usr/bin/apptainer --version
[2025-11-21 18:58:13] apptainer version 1.3.2-1.el7
[2025-11-21 18:58:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 18:58:14] c-205-25.aglt2.org
[2025-11-21 18:58:14] apptainer works
[2025-11-21 18:58:14] Set ATHENA_PROC_NUMBER=12
[2025-11-21 18:58:14] Set ATHENA_CORE_NUMBER=12
[2025-11-21 18:58:14] Starting ATLAS job with PandaID=6893877429
[2025-11-21 18:58:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 02:10:35]  *** The last 200 lines of the pilot log: ***
[2025-11-22 02:10:35] 2025-11-22 07:09:58,484 | INFO     | time since job start (25889s) is within the limit (172800.0s)
[2025-11-22 02:10:35] 2025-11-22 07:10:00,440 | INFO     | monitor loop #1939: job 0:6893877429 is in state 'finished'
[2025-11-22 02:10:35] 2025-11-22 07:10:00,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 02:10:35] 2025-11-22 07:10:00,485 | INFO     | time since job start (25891s) is within the limit (172800.0s)
[2025-11-22 02:10:35] 2025-11-22 07:10:01,632 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 02:10:35] 2025-11-22 07:10:01,635 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-22 02:10:35] 2025-11-22 07:10:01,637 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893877429/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 02:10:35] 2025-11-22 07:10:01,638 | INFO     | extracted standard info from prmon json
[2025-11-22 02:10:35] 2025-11-22 07:10:01,638 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 02:10:35] 2025-11-22 07:10:01,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 02:10:35] 2025-11-22 07:10:01,645 | INFO     | fitting pss+swap vs Time
[2025-11-22 02:10:35] 2025-11-22 07:10:01,645 | INFO     | sum of square deviations: 23636033752.896294
[2025-11-22 02:10:35] 2025-11-22 07:10:01,649 | INFO     | sum of deviations: 388418086813.155
[2025-11-22 02:10:35] 2025-11-22 07:10:01,649 | INFO     | mean x: 1763782440.712264
[2025-11-22 02:10:35] 2025-11-22 07:10:01,649 | INFO     | mean y: 3420862.6816037735
[2025-11-22 02:10:35] 2025-11-22 07:10:01,649 | INFO     | intersect: -28981349100.770756
[2025-11-22 02:10:35] 2025-11-22 07:10:01,650 | INFO     | chi2: 5.928913559197661
[2025-11-22 02:10:35] 2025-11-22 07:10:01,650 | INFO     | sum of square deviations: 22809701522.667988
[2025-11-22 02:10:35] 2025-11-22 07:10:01,654 | INFO     | sum of deviations: 537991748024.12476
[2025-11-22 02:10:35] 2025-11-22 07:10:01,654 | INFO     | mean x: 1763782288.214797
[2025-11-22 02:10:35] 2025-11-22 07:10:01,655 | INFO     | mean y: 3448437.754176611
[2025-11-22 02:10:35] 2025-11-22 07:10:01,655 | INFO     | intersect: -41597285154.82109
[2025-11-22 02:10:35] 2025-11-22 07:10:01,655 | INFO     | chi2: 3.29285978984013
[2025-11-22 02:10:35] 2025-11-22 07:10:01,655 | INFO     | current chi2=3.29285978984013 (change=44.46099176582124 %)
[2025-11-22 02:10:35] 2025-11-22 07:10:01,656 | INFO     | sum of square deviations: 22002858029.934746
[2025-11-22 02:10:35] 2025-11-22 07:10:01,659 | INFO     | sum of deviations: 595058679867.5651
[2025-11-22 02:10:35] 2025-11-22 07:10:01,660 | INFO     | mean x: 1763782135.7173913
[2025-11-22 02:10:35] 2025-11-22 07:10:01,660 | INFO     | mean y: 3459169.115942029
[2025-11-22 02:10:35] 2025-11-22 07:10:01,660 | INFO     | intersect: -47697338055.77521
[2025-11-22 02:10:35] 2025-11-22 07:10:01,660 | INFO     | chi2: 2.614843235668196
[2025-11-22 02:10:35] 2025-11-22 07:10:01,660 | INFO     | current chi2=2.614843235668196 (change=20.59050786990393 %)
[2025-11-22 02:10:35] 2025-11-22 07:10:01,661 | INFO     | right removable region: 413
[2025-11-22 02:10:35] 2025-11-22 07:10:01,661 | INFO     | sum of square deviations: 22809646622.668
[2025-11-22 02:10:35] 2025-11-22 07:10:01,665 | INFO     | sum of deviations: 243258774199.94055
[2025-11-22 02:10:35] 2025-11-22 07:10:01,665 | INFO     | mean x: 1763782593.214797
[2025-11-22 02:10:35] 2025-11-22 07:10:01,665 | INFO     | mean y: 3447575.9451073986
[2025-11-22 02:10:35] 2025-11-22 07:10:01,665 | INFO     | intersect: -18806821547.392944
[2025-11-22 02:10:35] 2025-11-22 07:10:01,666 | INFO     | chi2: 3.4793818162066654
[2025-11-22 02:10:35] 2025-11-22 07:10:01,666 | INFO     | current chi2=3.4793818162066654 (change=41.31501865448823 %)
[2025-11-22 02:10:35] 2025-11-22 07:10:01,666 | INFO     | sum of square deviations: 22002773666.3673
[2025-11-22 02:10:35] 2025-11-22 07:10:01,670 | INFO     | sum of deviations: 210454174712.43524
[2025-11-22 02:10:35] 2025-11-22 07:10:01,670 | INFO     | mean x: 1763782745.7149758
[2025-11-22 02:10:35] 2025-11-22 07:10:01,670 | INFO     | mean y: 3453769.9782608696
[2025-11-22 02:10:35] 2025-11-22 07:10:01,670 | INFO     | intersect: -16866939379.085268
[2025-11-22 02:10:35] 2025-11-22 07:10:01,671 | INFO     | chi2: 3.426027326712847
[2025-11-22 02:10:35] 2025-11-22 07:10:01,671 | INFO     | current chi2=3.426027326712847 (change=1.5334473855469901 %)
[2025-11-22 02:10:35] 2025-11-22 07:10:01,671 | INFO     | left removable region: 20
[2025-11-22 02:10:35] 2025-11-22 07:10:01,671 | INFO     | sum of square deviations: 18821489677.7405
[2025-11-22 02:10:35] 2025-11-22 07:10:01,675 | INFO     | sum of deviations: 372369812712.145
[2025-11-22 02:10:35] 2025-11-22 07:10:01,675 | INFO     | mean x: 1763782715.221374
[2025-11-22 02:10:35] 2025-11-22 07:10:01,675 | INFO     | mean y: 3502020.7684478373
[2025-11-22 02:10:35] 2025-11-22 07:10:01,675 | INFO     | intersect: -34891686966.77758
[2025-11-22 02:10:35] 2025-11-22 07:10:01,676 | INFO     | chi2: 0.06181744031902632
[2025-11-22 02:10:35] 2025-11-22 07:10:01,676 | INFO     | current memory leak: 19.78 B/s (using 393 data points, chi2=0.06)
[2025-11-22 02:10:35] 2025-11-22 07:10:01,676 | INFO     | could have reported an average CPU frequency of 2394 MHz (18 samples)
[2025-11-22 02:10:35] 2025-11-22 07:10:01,676 | INFO     | ..............................
[2025-11-22 02:10:35] 2025-11-22 07:10:01,676 | INFO     | . Timing measurements:
[2025-11-22 02:10:35] 2025-11-22 07:10:01,677 | INFO     | . get job = 0 s
[2025-11-22 02:10:35] 2025-11-22 07:10:01,677 | INFO     | . initial setup = 2 s
[2025-11-22 02:10:35] 2025-11-22 07:10:01,677 | INFO     | . payload setup = 7 s
[2025-11-22 02:10:35] 2025-11-22 07:10:01,677 | INFO     | . stage-in = 0 s
[2025-11-22 02:10:35] 2025-11-22 07:10:01,677 | INFO     | . payload execution = 25854 s
[2025-11-22 02:10:35] 2025-11-22 07:10:01,677 | INFO     | . stage-out = 3 s
[2025-11-22 02:10:35] 2025-11-22 07:10:01,677 | INFO     | . log creation = 0 s
[2025-11-22 02:10:35] 2025-11-22 07:10:01,677 | INFO     | ..............................
[2025-11-22 02:10:35] 2025-11-22 07:10:02,038 | INFO     | 
[2025-11-22 02:10:35] 2025-11-22 07:10:02,038 | INFO     | job summary report
[2025-11-22 02:10:35] 2025-11-22 07:10:02,038 | INFO     | --------------------------------------------------
[2025-11-22 02:10:35] 2025-11-22 07:10:02,038 | INFO     | PanDA job id: 6893877429
[2025-11-22 02:10:35] 2025-11-22 07:10:02,038 | INFO     | task id: 47523449
[2025-11-22 02:10:35] 2025-11-22 07:10:02,038 | INFO     | errors: (none)
[2025-11-22 02:10:35] 2025-11-22 07:10:02,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 02:10:35] 2025-11-22 07:10:02,039 | INFO     | pilot state: finished 
[2025-11-22 02:10:35] 2025-11-22 07:10:02,039 | INFO     | transexitcode: 0
[2025-11-22 02:10:35] 2025-11-22 07:10:02,039 | INFO     | exeerrorcode: 0
[2025-11-22 02:10:35] 2025-11-22 07:10:02,039 | INFO     | exeerrordiag: 
[2025-11-22 02:10:35] 2025-11-22 07:10:02,039 | INFO     | exitcode: 0
[2025-11-22 02:10:35] 2025-11-22 07:10:02,039 | INFO     | exitmsg: OK
[2025-11-22 02:10:35] 2025-11-22 07:10:02,040 | INFO     | cpuconsumptiontime: 296012 s
[2025-11-22 02:10:35] 2025-11-22 07:10:02,040 | INFO     | nevents: 1000
[2025-11-22 02:10:35] 2025-11-22 07:10:02,040 | INFO     | neventsw: 0
[2025-11-22 02:10:35] 2025-11-22 07:10:02,040 | INFO     | pid: 31903
[2025-11-22 02:10:35] 2025-11-22 07:10:02,040 | INFO     | pgrp: 31903
[2025-11-22 02:10:35] 2025-11-22 07:10:02,040 | INFO     | corecount: 12
[2025-11-22 02:10:35] 2025-11-22 07:10:02,041 | INFO     | event service: False
[2025-11-22 02:10:35] 2025-11-22 07:10:02,041 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 25866: 2336339, 25870: 2345333, 25872: 2345389, 25877: 2345763}
[2025-11-22 02:10:35] 2025-11-22 07:10:02,041 | INFO     | --------------------------------------------------
[2025-11-22 02:10:35] 2025-11-22 07:10:02,041 | INFO     | 
[2025-11-22 02:10:35] 2025-11-22 07:10:02,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 02:10:35] 2025-11-22 07:10:02,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 02:10:35] 2025-11-22 07:10:02,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 02:10:35] 2025-11-22 07:10:02,117 | INFO     | job 6893877429 has completed (purged errors)
[2025-11-22 02:10:35] 2025-11-22 07:10:02,118 | INFO     | overall cleanup function is called
[2025-11-22 02:10:35] 2025-11-22 07:10:03,134 | INFO     | --- collectZombieJob: --- 10, [31903]
[2025-11-22 02:10:35] 2025-11-22 07:10:03,134 | INFO     | zombie collector waiting for pid 31903
[2025-11-22 02:10:35] 2025-11-22 07:10:03,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 02:10:35] 2025-11-22 07:10:03,142 | INFO     | collected zombie processes
[2025-11-22 02:10:35] 2025-11-22 07:10:03,142 | INFO     | will attempt to kill all subprocesses of pid=31903
[2025-11-22 02:10:35] 2025-11-22 07:10:03,233 | INFO     | process IDs to be killed: [31903] (in reverse order)
[2025-11-22 02:10:35] 2025-11-22 07:10:03,286 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 02:10:35] 2025-11-22 07:10:03,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 02:10:35] 2025-11-22 07:10:03,291 | INFO     | did not find any defunct processes belonging to 31903
[2025-11-22 02:10:35] 2025-11-22 07:10:03,294 | INFO     | did not find any defunct processes belonging to 31903
[2025-11-22 02:10:35] 2025-11-22 07:10:03,296 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 02:10:35] 2025-11-22 07:10:03,297 | INFO     | ready for new job
[2025-11-22 02:10:35] 2025-11-22 07:10:03,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 02:10:35] 2025-11-22 07:10:03,299 | INFO     | ***************************************
[2025-11-22 02:10:35] 2025-11-22 07:10:03,299 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 02:10:35] 2025-11-22 07:10:03,299 | INFO     | ***************************************
[2025-11-22 02:10:35] 2025-11-22 07:10:03,299 | INFO     | 
[2025-11-22 02:10:35] 2025-11-22 07:10:03,300 | INFO     | architecture information:
[2025-11-22 02:10:35] 2025-11-22 07:10:03,300 | INFO     | executing command: cat /etc/os-release
[2025-11-22 02:10:35] 2025-11-22 07:10:03,315 | INFO     | cat /etc/os-release:
[2025-11-22 02:10:35] NAME="CentOS Linux"
[2025-11-22 02:10:35] VERSION="7 (Core)"
[2025-11-22 02:10:35] ID="centos"
[2025-11-22 02:10:35] ID_LIKE="rhel fedora"
[2025-11-22 02:10:35] VERSION_ID="7"
[2025-11-22 02:10:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 02:10:35] ANSI_COLOR="0;31"
[2025-11-22 02:10:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 02:10:35] HOME_URL="https://www.centos.org/"
[2025-11-22 02:10:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 02:10:35] 
[2025-11-22 02:10:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 02:10:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 02:10:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 02:10:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 02:10:35] 
[2025-11-22 02:10:35] 2025-11-22 07:10:03,315 | INFO     | ***************************************
[2025-11-22 02:10:35] 2025-11-22 07:10:03,818 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 02:10:35] 2025-11-22 07:10:03,836 | INFO     | sufficient remaining disk space (28262268928 B)
[2025-11-22 02:10:35] 2025-11-22 07:10:03,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 02:10:35] 2025-11-22 07:10:03,837 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 02:10:35] 2025-11-22 07:10:03,837 | INFO     | update_server=False
[2025-11-22 02:10:35] 2025-11-22 07:10:03,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 02:10:35] 2025-11-22 07:10:03,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 02:10:35] 2025-11-22 07:10:03,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 02:10:35] 2025-11-22 07:10:03,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 02:10:35] 2025-11-22 07:10:03,948 | INFO     | aborting loop
[2025-11-22 02:10:35] 2025-11-22 07:10:04,041 | INFO     | all data control threads have been joined
[2025-11-22 02:10:35] 2025-11-22 07:10:04,341 | INFO     | all payload control threads have been joined
[2025-11-22 02:10:35] 2025-11-22 07:10:04,843 | INFO     | [job] retrieve thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:04,923 | INFO     | [payload] validate_post thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:04,928 | INFO     | all job control threads have been joined
[2025-11-22 02:10:35] 2025-11-22 07:10:04,953 | INFO     | [job] validate thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:04,954 | INFO     | [job] job monitor thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:05,002 | INFO     | [payload] failed_post thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:05,047 | INFO     | [data] control thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:05,277 | INFO     | [data] copytool_in thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:05,346 | INFO     | [payload] control thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:05,540 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:05,546 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:05,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:05,844 | INFO     | [data] copytool_out thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:05,933 | INFO     | [job] control thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:06,267 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:06,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 02:10:35] 2025-11-22 07:10:07,773 | INFO     | [job] queue monitor thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:07,844 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 02:10:35] 2025-11-22 07:10:11,307 | INFO     | [monitor] cgroup control has ended
[2025-11-22 02:10:35] 2025-11-22 07:10:12,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140282361206592)>', '<ExcThread(monitor, started 140281919813376)>']
[2025-11-22 02:10:35] 2025-11-22 07:10:17,809 | INFO     | all workflow threads have been joined
[2025-11-22 02:10:35] 2025-11-22 07:10:17,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 02:10:35] 2025-11-22 07:10:17,810 | INFO     | traces error code: 0
[2025-11-22 02:10:35] 2025-11-22 07:10:17,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 02:10:35] 2025-11-22 07:10:33,686 | INFO     | PID=25530 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 02:10:35] 2025-11-22 07:10:33,686 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 02:10:35] 2025-11-22 07:10:33,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 02:10:35] 2025-11-22 07:10:33,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 02:10:35] 2025-11-22 07:10:33,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 02:10:35] 2025-11-22 07:10:33,687 | INFO     | [monitor] control thread has ended
[2025-11-22 02:10:35] 2025-11-22 07:10:33,781 [wrapper] ==== pilot stdout END ====
[2025-11-22 02:10:35] 2025-11-22 07:10:33,784 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 02:10:35] 2025-11-22 07:10:33,788 [wrapper] pilotpid: 25530
[2025-11-22 02:10:35] 2025-11-22 07:10:33,792 [wrapper] Pilot exit status: 0
[2025-11-22 02:10:35] 2025-11-22 07:10:33,806 [wrapper] pandaids: 6893877429
[2025-11-22 02:10:35] 2025-11-22 07:10:33,845 [wrapper] cleanup supervisor_pilot 28839 25531
[2025-11-22 02:10:35] 2025-11-22 07:10:33,848 [wrapper] Test setup, not cleaning
[2025-11-22 02:10:35] 2025-11-22 07:10:33,851 [wrapper] apfmon messages muted
[2025-11-22 02:10:35] 2025-11-22 07:10:33,855 [wrapper] ==== wrapper stdout END ====
[2025-11-22 02:10:35] 2025-11-22 07:10:33,858 [wrapper] ==== wrapper stderr END ====
[2025-11-22 02:10:35]  *** Error codes and diagnostics ***
[2025-11-22 02:10:35]     "exeErrorCode": 0,
[2025-11-22 02:10:35]     "exeErrorDiag": "",
[2025-11-22 02:10:35]     "pilotErrorCode": 0,
[2025-11-22 02:10:35]     "pilotErrorDiag": "",
[2025-11-22 02:10:35]  *** Listing of results directory ***
[2025-11-22 02:10:35] total 1301772
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 13:04 pilot3.tar.gz
[2025-11-22 02:10:35] -rwx------ 1 boincer umatlas     36292 Nov 20 13:47 runpilot2-wrapper.sh
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 13:47 queuedata.json
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas       100 Nov 21 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 02:10:35] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 18:58 run_atlas
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas       105 Nov 21 18:58 job.xml
[2025-11-22 02:10:35] -rw-r--r-- 2 boincer umatlas 407928529 Nov 21 18:58 EVNT.47493127._000803.pool.root.1
[2025-11-22 02:10:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 18:58 start_atlas.sh
[2025-11-22 02:10:35] drwxrwx--x 2 boincer umatlas      4096 Nov 21 18:58 shared
[2025-11-22 02:10:35] -rw-r--r-- 2 boincer umatlas    590094 Nov 21 18:58 input.tar.gz
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas         0 Nov 21 18:58 boinc_lockfile
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas      2785 Nov 21 18:58 pandaJob.out
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas        57 Nov 21 18:58 setup.sh.local
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas    989798 Nov 21 18:58 agis_schedconf.cvmfs.json
[2025-11-22 02:10:35] drwx------ 5 boincer umatlas      4096 Nov 21 18:58 pilot3
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas       532 Nov 22 02:00 boinc_task_state.xml
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 02:01 init_data.xml
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas 909588126 Nov 22 02:09 HITS.47523449._008029.pool.root.1
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas      1062 Nov 22 02:09 memory_monitor_summary.json
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas        95 Nov 22 02:09 pilot_heartbeat.json
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas   1526164 Nov 22 02:09 agis_ddmendpoints.agis.ALL.json
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas   2172825 Nov 22 02:09 log.47523449._008029.job.log.tgz.1
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas      8680 Nov 22 02:10 heartbeat.json
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 02:10 boinc_mmap_file
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas        29 Nov 22 02:10 wrapper_checkpoint.txt
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas       745 Nov 22 02:10 pilotlog.txt
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas   3618702 Nov 22 02:10 log.47523449._008029.job.log.1
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas       353 Nov 22 02:10 output.list
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas       620 Nov 22 02:10 runtime_log
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas   5806080 Nov 22 02:10 result.tar.gz
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 02:10 runtime_log.err
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas       670 Nov 22 02:10 nutNDmHsOg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6xGKDmn5H8Ao.diag
[2025-11-22 02:10:35] -rw-r--r-- 1 boincer umatlas     21313 Nov 22 02:10 stderr.txt
[2025-11-22 02:10:35] HITS file was successfully produced:
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas 909588126 Nov 22 02:09 shared/HITS.pool.root.1
[2025-11-22 02:10:35]  *** Contents of shared directory: ***
[2025-11-22 02:10:35] total 1292912
[2025-11-22 02:10:35] -rw-r--r-- 2 boincer umatlas 407928529 Nov 21 18:58 ATLAS.root_0
[2025-11-22 02:10:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 18:58 start_atlas.sh
[2025-11-22 02:10:35] -rw-r--r-- 2 boincer umatlas    590094 Nov 21 18:58 input.tar.gz
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas 909588126 Nov 22 02:09 HITS.pool.root.1
[2025-11-22 02:10:35] -rw------- 1 boincer umatlas   5806080 Nov 22 02:10 result.tar.gz
02:10:36 (21832): run_atlas exited; CPU time 289377.263483
02:10:36 (21832): called boinc_finish(0)

</stderr_txt>
]]>

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