Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
23:00:15 (1666096): wrapper (7.7.26015): starting
23:00:15 (1666096): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 23:00:15] Arguments: --nthreads 12
[2025-11-25 23:00:15] Threads: 12
[2025-11-25 23:00:15] Checking for CVMFS
[2025-11-25 23:00:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:00:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:00:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:00:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:00:18] 2.13.0.0 2291514 10163 169788 153300 2 89 2420100 4096000 17192 130560 0 61087439 99.987 1023577 620 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-11-25 23:00:18] CVMFS is ok
[2025-11-25 23:00:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:00:18] Checking for apptainer binary...
[2025-11-25 23:00:18] apptainer is not installed, using version from CVMFS
[2025-11-25 23:00:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:00:50] epyc7v12
[2025-11-25 23:00:50] apptainer works
[2025-11-25 23:00:50] Set ATHENA_PROC_NUMBER=12
[2025-11-25 23:00:50] Set ATHENA_CORE_NUMBER=12
[2025-11-25 23:00:51] Starting ATLAS job with PandaID=6893883494
[2025-11-25 23:00:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:09:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:09:43] 2025-11-26 11:08:16,345 | INFO     | monitor loop #2633: job 0:6893883494 is in state 'finished'
[2025-11-26 11:09:43] 2025-11-26 11:08:16,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:09:43] 2025-11-26 11:08:16,719 | INFO     | time since job start (43317s) is within the limit (172800.0s)
[2025-11-26 11:09:43] 2025-11-26 11:08:18,727 | INFO     | time since job start (43319s) is within the limit (172800.0s)
[2025-11-26 11:09:43] 2025-11-26 11:08:18,847 | INFO     | monitor loop #2634: job 0:6893883494 is in state 'finished'
[2025-11-26 11:09:43] 2025-11-26 11:08:18,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:09:43] 2025-11-26 11:08:20,735 | INFO     | time since job start (43321s) is within the limit (172800.0s)
[2025-11-26 11:09:43] 2025-11-26 11:08:21,355 | INFO     | monitor loop #2635: job 0:6893883494 is in state 'finished'
[2025-11-26 11:09:43] 2025-11-26 11:08:21,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:09:43] 2025-11-26 11:08:22,743 | INFO     | time since job start (43323s) is within the limit (172800.0s)
[2025-11-26 11:09:43] 2025-11-26 11:08:23,871 | INFO     | monitor loop #2636: job 0:6893883494 is in state 'finished'
[2025-11-26 11:09:43] 2025-11-26 11:08:23,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:09:43] 2025-11-26 11:08:24,755 | INFO     | time since job start (43325s) is within the limit (172800.0s)
[2025-11-26 11:09:43] 2025-11-26 11:08:26,379 | INFO     | monitor loop #2637: job 0:6893883494 is in state 'finished'
[2025-11-26 11:09:43] 2025-11-26 11:08:26,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:09:43] 2025-11-26 11:08:26,763 | INFO     | time since job start (43327s) is within the limit (172800.0s)
[2025-11-26 11:09:43] 2025-11-26 11:08:28,526 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 11:09:43] 2025-11-26 11:08:28,573 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2399.3197187499995
[2025-11-26 11:09:43] 2025-11-26 11:08:28,628 | INFO     | using path: /opt/boinc/instance_homes/boinc_31419/slots/1/PanDA_Pilot-6893883494/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:09:43] 2025-11-26 11:08:28,629 | INFO     | extracted standard info from prmon json
[2025-11-26 11:09:43] 2025-11-26 11:08:28,629 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:09:43] 2025-11-26 11:08:28,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:09:43] 2025-11-26 11:08:28,642 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:09:43] 2025-11-26 11:08:28,643 | INFO     | sum of square deviations: 105450435632.09183
[2025-11-26 11:09:43] 2025-11-26 11:08:28,660 | INFO     | sum of deviations: 754615179908.126
[2025-11-26 11:09:43] 2025-11-26 11:08:28,661 | INFO     | mean x: 1764133885.5587392
[2025-11-26 11:09:43] 2025-11-26 11:08:28,661 | INFO     | mean y: 3139284.1432664758
[2025-11-26 11:09:43] 2025-11-26 11:08:28,661 | INFO     | intersect: -12621201255.117542
[2025-11-26 11:09:43] 2025-11-26 11:08:28,662 | INFO     | chi2: 63.851997324742456
[2025-11-26 11:09:43] 2025-11-26 11:08:28,663 | INFO     | sum of square deviations: 103200961943.24736
[2025-11-26 11:09:43] 2025-11-26 11:08:28,692 | INFO     | sum of deviations: 1019796090240.7583
[2025-11-26 11:09:43] 2025-11-26 11:08:28,692 | INFO     | mean x: 1764133733.0735931
[2025-11-26 11:09:43] 2025-11-26 11:08:28,692 | INFO     | mean y: 3157255.8282828284
[2025-11-26 11:09:43] 2025-11-26 11:08:28,692 | INFO     | intersect: -17429400055.407124
[2025-11-26 11:09:43] 2025-11-26 11:08:28,693 | INFO     | chi2: 59.68787551984037
[2025-11-26 11:09:43] 2025-11-26 11:08:28,693 | INFO     | current chi2=59.68787551984037 (change=6.521521611491552 %)
[2025-11-26 11:09:43] 2025-11-26 11:08:28,693 | INFO     | right removable region: 692
[2025-11-26 11:09:43] 2025-11-26 11:08:28,694 | INFO     | sum of square deviations: 103200085373.24736
[2025-11-26 11:09:43] 2025-11-26 11:08:28,719 | INFO     | sum of deviations: 421241970880.18823
[2025-11-26 11:09:43] 2025-11-26 11:08:28,719 | INFO     | mean x: 1764134038.0735931
[2025-11-26 11:09:43] 2025-11-26 11:08:28,719 | INFO     | mean y: 3161878.3492063493
[2025-11-26 11:09:43] 2025-11-26 11:08:28,719 | INFO     | intersect: -7197678086.145502
[2025-11-26 11:09:43] 2025-11-26 11:08:28,720 | INFO     | chi2: 58.33769424645038
[2025-11-26 11:09:43] 2025-11-26 11:08:28,720 | INFO     | current chi2=58.33769424645038 (change=8.636069832314075 %)
[2025-11-26 11:09:43] 2025-11-26 11:08:28,720 | INFO     | left removable region: 10
[2025-11-26 11:09:43] 2025-11-26 11:08:28,721 | INFO     | sum of square deviations: 98363499970.68642
[2025-11-26 11:09:43] 2025-11-26 11:08:28,745 | INFO     | sum of deviations: 425083173198.15515
[2025-11-26 11:09:43] 2025-11-26 11:08:28,745 | INFO     | mean x: 1764134007.607038
[2025-11-26 11:09:43] 2025-11-26 11:08:28,746 | INFO     | mean y: 3206378.175953079
[2025-11-26 11:09:43] 2025-11-26 11:08:28,746 | INFO     | intersect: -7620593935.190885
[2025-11-26 11:09:43] 2025-11-26 11:08:28,751 | INFO     | chi2: 48.299577905184385
[2025-11-26 11:09:43] 2025-11-26 11:08:28,751 | INFO     | current memory leak: 4.32 B/s (using 682 data points, chi2=48.30)
[2025-11-26 11:09:43] 2025-11-26 11:08:28,752 | INFO     | could have reported an average CPU frequency of 2399 MHz (26 samples)
[2025-11-26 11:09:43] 2025-11-26 11:08:28,752 | INFO     | ..............................
[2025-11-26 11:09:43] 2025-11-26 11:08:28,752 | INFO     | . Timing measurements:
[2025-11-26 11:09:43] 2025-11-26 11:08:28,752 | INFO     | . get job = 0 s
[2025-11-26 11:09:43] 2025-11-26 11:08:28,752 | INFO     | . initial setup = 7 s
[2025-11-26 11:09:43] 2025-11-26 11:08:28,752 | INFO     | . payload setup = 191 s
[2025-11-26 11:09:43] 2025-11-26 11:08:28,753 | INFO     | . stage-in = 0 s
[2025-11-26 11:09:43] 2025-11-26 11:08:28,753 | INFO     | . payload execution = 42690 s
[2025-11-26 11:09:43] 2025-11-26 11:08:28,753 | INFO     | . stage-out = 6 s
[2025-11-26 11:09:43] 2025-11-26 11:08:28,753 | INFO     | . log creation = 2 s
[2025-11-26 11:09:43] 2025-11-26 11:08:28,753 | INFO     | ..............................
[2025-11-26 11:09:43] 2025-11-26 11:08:28,779 | INFO     | time since job start (43329s) is within the limit (172800.0s)
[2025-11-26 11:09:43] 2025-11-26 11:08:28,966 | INFO     | 
[2025-11-26 11:09:43] 2025-11-26 11:08:28,966 | INFO     | job summary report
[2025-11-26 11:09:43] 2025-11-26 11:08:28,966 | INFO     | --------------------------------------------------
[2025-11-26 11:09:43] 2025-11-26 11:08:28,966 | INFO     | PanDA job id: 6893883494
[2025-11-26 11:09:43] 2025-11-26 11:08:28,966 | INFO     | task id: 47523449
[2025-11-26 11:09:43] 2025-11-26 11:08:28,966 | INFO     | errors: (none)
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | pilot state: finished 
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | transexitcode: 0
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | exeerrorcode: 0
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | exeerrordiag: 
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | exitcode: 0
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | exitmsg: OK
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | cpuconsumptiontime: 258486 s
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | nevents: 1000
[2025-11-26 11:09:43] 2025-11-26 11:08:28,971 | INFO     | neventsw: 0
[2025-11-26 11:09:43] 2025-11-26 11:08:28,972 | INFO     | pid: 1711836
[2025-11-26 11:09:43] 2025-11-26 11:08:28,972 | INFO     | pgrp: 1711836
[2025-11-26 11:09:43] 2025-11-26 11:08:28,972 | INFO     | corecount: 12
[2025-11-26 11:09:43] 2025-11-26 11:08:28,972 | INFO     | event service: False
[2025-11-26 11:09:43] 2025-11-26 11:08:28,972 | INFO     | sizes: {0: 2284110, 1: 2284194, 2: 2284393, 13: 2284393, 24: 2284449, 34: 2284477, 45: 2284633, 56: 2284661, 67: 2284689, 78: 2284717, 88: 2284773, 99: 2285081, 11
[2025-11-26 11:09:43] 2025-11-26 11:08:28,972 | INFO     | --------------------------------------------------
[2025-11-26 11:09:43] 2025-11-26 11:08:28,972 | INFO     | 
[2025-11-26 11:09:43] 2025-11-26 11:08:28,972 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/1
[2025-11-26 11:09:43] 2025-11-26 11:08:29,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:09:43] 2025-11-26 11:08:29,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:09:43] 2025-11-26 11:08:29,585 | INFO     | job 6893883494 has completed (purged errors)
[2025-11-26 11:09:43] 2025-11-26 11:08:29,586 | INFO     | overall cleanup function is called
[2025-11-26 11:09:43] 2025-11-26 11:08:30,635 | INFO     | --- collectZombieJob: --- 10, [1711836]
[2025-11-26 11:09:43] 2025-11-26 11:08:30,635 | INFO     | zombie collector waiting for pid 1711836
[2025-11-26 11:09:43] 2025-11-26 11:08:30,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:09:43] 2025-11-26 11:08:30,635 | INFO     | collected zombie processes
[2025-11-26 11:09:43] 2025-11-26 11:08:30,635 | INFO     | will attempt to kill all subprocesses of pid=1711836
[2025-11-26 11:09:43] 2025-11-26 11:08:31,913 | INFO     | process IDs to be killed: [1711836] (in reverse order)
[2025-11-26 11:09:43] 2025-11-26 11:08:44,870 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:09:43] 2025-11-26 11:08:44,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:09:43] 2025-11-26 11:08:44,909 | INFO     | did not find any defunct processes belonging to 1711836
[2025-11-26 11:09:43] 2025-11-26 11:08:44,965 | INFO     | did not find any defunct processes belonging to 1711836
[2025-11-26 11:09:43] 2025-11-26 11:08:45,031 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:09:43] 2025-11-26 11:08:45,031 | INFO     | ready for new job
[2025-11-26 11:09:43] 2025-11-26 11:08:45,031 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:09:43] 2025-11-26 11:08:45,036 | INFO     | ***************************************
[2025-11-26 11:09:43] 2025-11-26 11:08:45,036 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:09:43] 2025-11-26 11:08:45,036 | INFO     | ***************************************
[2025-11-26 11:09:43] 2025-11-26 11:08:45,037 | INFO     | 
[2025-11-26 11:09:43] 2025-11-26 11:08:45,073 | INFO     | architecture information:
[2025-11-26 11:09:43] 2025-11-26 11:08:45,087 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:09:43] 2025-11-26 11:08:45,507 | INFO     | cat /etc/os-release:
[2025-11-26 11:09:43] NAME="CentOS Linux"
[2025-11-26 11:09:43] VERSION="7 (Core)"
[2025-11-26 11:09:43] ID="centos"
[2025-11-26 11:09:43] ID_LIKE="rhel fedora"
[2025-11-26 11:09:43] VERSION_ID="7"
[2025-11-26 11:09:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:09:43] ANSI_COLOR="0;31"
[2025-11-26 11:09:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:09:43] HOME_URL="https://www.centos.org/"
[2025-11-26 11:09:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:09:43] 
[2025-11-26 11:09:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:09:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:09:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:09:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:09:43] 
[2025-11-26 11:09:43] 2025-11-26 11:08:45,508 | INFO     | ***************************************
[2025-11-26 11:09:43] 2025-11-26 11:08:46,011 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/1
[2025-11-26 11:09:43] 2025-11-26 11:08:46,551 | INFO     | sufficient remaining disk space (329892495360 B)
[2025-11-26 11:09:43] 2025-11-26 11:08:46,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:09:43] 2025-11-26 11:08:46,552 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:09:43] 2025-11-26 11:08:46,552 | INFO     | update_server=False
[2025-11-26 11:09:43] 2025-11-26 11:08:46,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:09:43] 2025-11-26 11:08:46,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:09:43] 2025-11-26 11:08:46,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:09:43] 2025-11-26 11:08:46,999 | INFO     | all payload control threads have been joined
[2025-11-26 11:09:43] 2025-11-26 11:08:47,210 | INFO     | all data control threads have been joined
[2025-11-26 11:09:43] 2025-11-26 11:08:47,313 | INFO     | all job control threads have been joined
[2025-11-26 11:09:43] 2025-11-26 11:08:47,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:09:43] 2025-11-26 11:08:47,515 | INFO     | aborting loop
[2025-11-26 11:09:43] 2025-11-26 11:08:47,555 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:47,559 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:47,887 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:47,935 | INFO     | [job] validate thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,003 | INFO     | [payload] control thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,007 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:09:43] 2025-11-26 11:08:48,219 | INFO     | [data] control thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,251 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,319 | INFO     | [job] control thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,523 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,535 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,547 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,563 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:48,707 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:49,011 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:08:52,091 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:09:43] 2025-11-26 11:09:03,321 | INFO     | PID=1686745 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:09:43] 2025-11-26 11:09:03,321 | INFO     | .. there are 20 such processes running
[2025-11-26 11:09:43] 2025-11-26 11:09:03,322 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:09:43] 2025-11-26 11:09:03,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:09:43] 2025-11-26 11:09:03,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:09:43] 2025-11-26 11:09:32,459 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:09:43] 2025-11-26 11:09:33,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486425282368)>', '<ExcThread(monitor, started 140486115301120)>']
[2025-11-26 11:09:43] 2025-11-26 11:09:34,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:09:43] 2025-11-26 11:09:34,475 | INFO     | [monitor] control thread has ended
[2025-11-26 11:09:43] 2025-11-26 11:09:38,743 | INFO     | all workflow threads have been joined
[2025-11-26 11:09:43] 2025-11-26 11:09:38,743 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:09:43] 2025-11-26 11:09:38,743 | INFO     | traces error code: 0
[2025-11-26 11:09:43] 2025-11-26 11:09:38,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:09:43] 2025-11-26 11:09:39,059 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:09:43] 2025-11-26 11:09:39,179 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:09:43] 2025-11-26 11:09:39,283 [wrapper] pilotpid: 1686745
[2025-11-26 11:09:43] 2025-11-26 11:09:39,399 [wrapper] Pilot exit status: 0
[2025-11-26 11:09:43] 2025-11-26 11:09:39,875 [wrapper] pandaids: 6893883494
[2025-11-26 11:09:43] 2025-11-26 11:09:40,579 [wrapper] cleanup supervisor_pilot 3190358 1686746
[2025-11-26 11:09:43] 2025-11-26 11:09:40,699 [wrapper] Test setup, not cleaning
[2025-11-26 11:09:43] 2025-11-26 11:09:40,799 [wrapper] apfmon messages muted
[2025-11-26 11:09:43] 2025-11-26 11:09:40,919 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:09:43] 2025-11-26 11:09:40,983 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:09:43]  *** Error codes and diagnostics ***
[2025-11-26 11:09:43]     "exeErrorCode": 0,
[2025-11-26 11:09:43]     "exeErrorDiag": "",
[2025-11-26 11:09:43]     "pilotErrorCode": 0,
[2025-11-26 11:09:43]     "pilotErrorDiag": "",
[2025-11-26 11:09:43]  *** Listing of results directory ***
[2025-11-26 11:09:43] total 1323776
[2025-11-26 11:09:43] -rw-r--r-- 1 boinc boinc    576529 Nov 20 21:12 pilot3.tar.gz
[2025-11-26 11:09:43] -rw-r--r-- 1 boinc boinc      5112 Nov 20 21:19 queuedata.json
[2025-11-26 11:09:43] -rwx------ 1 boinc boinc     36292 Nov 20 21:20 runpilot2-wrapper.sh
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc       100 Nov 25 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:09:43] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 23:00 run_atlas
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc       105 Nov 25 23:00 job.xml
[2025-11-26 11:09:43] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:00 start_atlas.sh
[2025-11-26 11:09:43] drwxrwx--x 2 boinc boinc      4096 Nov 25 23:00 shared
[2025-11-26 11:09:43] -rw-r--r-- 2 boinc boinc    590101 Nov 25 23:00 input.tar.gz
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc      6546 Nov 25 23:00 init_data.xml
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc         0 Nov 25 23:00 boinc_setup_complete
[2025-11-26 11:09:43] -rw-r--r-- 2 boinc boinc 410591118 Nov 25 23:00 EVNT.47493127._000910.pool.root.1
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc         0 Nov 25 23:00 boinc_lockfile
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc      2785 Nov 25 23:00 pandaJob.out
[2025-11-26 11:09:43] -rw------- 1 boinc boinc    991877 Nov 25 23:06 agis_schedconf.cvmfs.json
[2025-11-26 11:09:43] drwx------ 5 boinc boinc      4096 Nov 25 23:06 pilot3
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc       533 Nov 26 10:15 boinc_task_state.xml
[2025-11-26 11:09:43] -rw------- 1 boinc boinc 925245758 Nov 26 11:04 HITS.47523449._009100.pool.root.1
[2025-11-26 11:09:43] -rw------- 1 boinc boinc      1038 Nov 26 11:05 memory_monitor_summary.json
[2025-11-26 11:09:43] -rw------- 1 boinc boinc   1516240 Nov 26 11:05 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:09:43] -rw------- 1 boinc boinc   2352213 Nov 26 11:06 log.47523449._009100.job.log.tgz.1
[2025-11-26 11:09:43] -rw------- 1 boinc boinc      8559 Nov 26 11:08 heartbeat.json
[2025-11-26 11:09:43] -rw------- 1 boinc boinc        95 Nov 26 11:09 pilot_heartbeat.json
[2025-11-26 11:09:43] -rw------- 1 boinc boinc      4848 Nov 26 11:09 pilotlog.txt
[2025-11-26 11:09:43] -rw------- 1 boinc boinc   5538867 Nov 26 11:09 log.47523449._009100.job.log.1
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc      8192 Nov 26 11:09 boinc_mmap_file
[2025-11-26 11:09:43] -rw------- 1 boinc boinc       353 Nov 26 11:09 output.list
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc       620 Nov 26 11:09 runtime_log
[2025-11-26 11:09:43] -rw------- 1 boinc boinc   7915520 Nov 26 11:09 result.tar.gz
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc        29 Nov 26 11:09 wrapper_checkpoint.txt
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc      9168 Nov 26 11:09 runtime_log.err
[2025-11-26 11:09:43] -rw------- 1 boinc boinc       660 Nov 26 11:09 EAXMDmdFRg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmx5GKDmlzEw1n.diag
[2025-11-26 11:09:43] -rw-rw-r-- 1 boinc boinc     21615 Nov 26 11:09 stderr.txt
[2025-11-26 11:09:43] HITS file was successfully produced:
[2025-11-26 11:09:43] -rw------- 1 boinc boinc 925245758 Nov 26 11:04 shared/HITS.pool.root.1
[2025-11-26 11:09:43]  *** Contents of shared directory: ***
[2025-11-26 11:09:43] total 1312868
[2025-11-26 11:09:43] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:00 start_atlas.sh
[2025-11-26 11:09:43] -rw-r--r-- 2 boinc boinc    590101 Nov 25 23:00 input.tar.gz
[2025-11-26 11:09:43] -rw-r--r-- 2 boinc boinc 410591118 Nov 25 23:00 ATLAS.root_0
[2025-11-26 11:09:43] -rw------- 1 boinc boinc 925245758 Nov 26 11:04 HITS.pool.root.1
[2025-11-26 11:09:43] -rw------- 1 boinc boinc   7915520 Nov 26 11:09 result.tar.gz
11:09:44 (1666096): run_atlas exited; CPU time 260025.319263
11:09:44 (1666096): called boinc_finish(0)

</stderr_txt>
]]>

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