Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:12:52 (30662): wrapper (7.7.26015): starting
18:12:52 (30662): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 18:12:52] Arguments: --nthreads 8
[2025-11-21 18:12:52] Threads: 8
[2025-11-21 18:12:52] Checking for CVMFS
[2025-11-21 18:12:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 18:12:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 18:12:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 18:12:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 18:12:52] 2.11.2.0 2910 40861 81516 153148 2 81 19946857 20275200 1 130560 0 4281363 99.447 2820231 28127 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 18:12:52] CVMFS is ok
[2025-11-21 18:12:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 18:12:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 18:12:52] Further information can be found at the LHC@home message board.
[2025-11-21 18:12:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 18:12:52] Checking for apptainer binary...
[2025-11-21 18:12:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 18:12:52] Running /usr/bin/apptainer --version
[2025-11-21 18:12:52] apptainer version 1.3.2-1.el7
[2025-11-21 18:12:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 18:12:54] c-204-13.aglt2.org
[2025-11-21 18:12:54] apptainer works
[2025-11-21 18:12:54] Set ATHENA_PROC_NUMBER=8
[2025-11-21 18:12:54] Set ATHENA_CORE_NUMBER=8
[2025-11-21 18:12:54] Starting ATLAS job with PandaID=6895323773
[2025-11-21 18:12:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 06:41:36]  *** The last 200 lines of the pilot log: ***
[2025-11-22 06:41:36] 2025-11-22 11:41:02,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 06:41:36] 2025-11-22 11:41:02,927 | INFO     | time since job start (44869s) is within the limit (172800.0s)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,502 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 06:41:36] 2025-11-22 11:41:04,506 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-22 06:41:36] 2025-11-22 11:41:04,508 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895323773/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,509 | INFO     | extracted standard info from prmon json
[2025-11-22 06:41:36] 2025-11-22 11:41:04,509 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 06:41:36] 2025-11-22 11:41:04,509 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 06:41:36] 2025-11-22 11:41:04,521 | INFO     | fitting pss+swap vs Time
[2025-11-22 06:41:36] 2025-11-22 11:41:04,522 | INFO     | sum of square deviations: 123123203054.10866
[2025-11-22 06:41:36] 2025-11-22 11:41:04,533 | INFO     | sum of deviations: 946997461056.1967
[2025-11-22 06:41:36] 2025-11-22 11:41:04,533 | INFO     | mean x: 1763789212.6258504
[2025-11-22 06:41:36] 2025-11-22 11:41:04,533 | INFO     | mean y: 3200183.6843537414
[2025-11-22 06:41:36] 2025-11-22 11:41:04,533 | INFO     | intersect: -13562917857.128345
[2025-11-22 06:41:36] 2025-11-22 11:41:04,534 | INFO     | chi2: 5.6122587201468095
[2025-11-22 06:41:36] 2025-11-22 11:41:04,535 | INFO     | sum of square deviations: 120627677954.63725
[2025-11-22 06:41:36] 2025-11-22 11:41:04,546 | INFO     | sum of deviations: 1192992047287.13
[2025-11-22 06:41:36] 2025-11-22 11:41:04,546 | INFO     | mean x: 1763789060.130137
[2025-11-22 06:41:36] 2025-11-22 11:41:04,547 | INFO     | mean y: 3215206.998630137
[2025-11-22 06:41:36] 2025-11-22 11:41:04,547 | INFO     | intersect: -17440429216.12113
[2025-11-22 06:41:36] 2025-11-22 11:41:04,547 | INFO     | chi2: 2.9243312438584117
[2025-11-22 06:41:36] 2025-11-22 11:41:04,548 | INFO     | current chi2=2.9243312438584117 (change=47.89386253059419 %)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,548 | INFO     | monitor loop #3293: job 0:6895323773 is in state 'finished'
[2025-11-22 06:41:36] 2025-11-22 11:41:04,549 | INFO     | sum of square deviations: 118166106980.13788
[2025-11-22 06:41:36] 2025-11-22 11:41:04,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,561 | INFO     | sum of deviations: 1250180299588.2273
[2025-11-22 06:41:36] 2025-11-22 11:41:04,561 | INFO     | mean x: 1763788907.6344829
[2025-11-22 06:41:36] 2025-11-22 11:41:04,562 | INFO     | mean y: 3218743.3668965516
[2025-11-22 06:41:36] 2025-11-22 11:41:04,562 | INFO     | intersect: -18657412475.765247
[2025-11-22 06:41:36] 2025-11-22 11:41:04,563 | INFO     | chi2: 2.667421829739745
[2025-11-22 06:41:36] 2025-11-22 11:41:04,563 | INFO     | current chi2=2.667421829739745 (change=8.785236441946164 %)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,563 | INFO     | right removable region: 724
[2025-11-22 06:41:36] 2025-11-22 11:41:04,564 | INFO     | sum of square deviations: 120627397354.63708
[2025-11-22 06:41:36] 2025-11-22 11:41:04,577 | INFO     | sum of deviations: 715884371452.5413
[2025-11-22 06:41:36] 2025-11-22 11:41:04,577 | INFO     | mean x: 1763789365.130137
[2025-11-22 06:41:36] 2025-11-22 11:41:04,577 | INFO     | mean y: 3214281.889041096
[2025-11-22 06:41:36] 2025-11-22 11:41:04,577 | INFO     | intersect: -10464301960.036459
[2025-11-22 06:41:36] 2025-11-22 11:41:04,578 | INFO     | chi2: 3.1920758757442007
[2025-11-22 06:41:36] 2025-11-22 11:41:04,578 | INFO     | current chi2=3.1920758757442007 (change=43.12315174841583 %)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,579 | INFO     | sum of square deviations: 118165590310.40602
[2025-11-22 06:41:36] 2025-11-22 11:41:04,593 | INFO     | sum of deviations: 654190633508.7109
[2025-11-22 06:41:36] 2025-11-22 11:41:04,593 | INFO     | mean x: 1763789517.6331034
[2025-11-22 06:41:36] 2025-11-22 11:41:04,593 | INFO     | mean y: 3218103.2620689655
[2025-11-22 06:41:36] 2025-11-22 11:41:04,593 | INFO     | intersect: -9761507642.07034
[2025-11-22 06:41:36] 2025-11-22 11:41:04,594 | INFO     | chi2: 3.105333839270683
[2025-11-22 06:41:36] 2025-11-22 11:41:04,594 | INFO     | current chi2=3.105333839270683 (change=2.7174177510205517 %)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,594 | INFO     | left removable region: 20
[2025-11-22 06:41:36] 2025-11-22 11:41:04,595 | INFO     | sum of square deviations: 108192178875.22159
[2025-11-22 06:41:36] 2025-11-22 11:41:04,606 | INFO     | sum of deviations: 872881669305.2737
[2025-11-22 06:41:36] 2025-11-22 11:41:04,606 | INFO     | mean x: 1763789487.1448863
[2025-11-22 06:41:36] 2025-11-22 11:41:04,606 | INFO     | mean y: 3242320.409090909
[2025-11-22 06:41:36] 2025-11-22 11:41:04,607 | INFO     | intersect: -14226802104.68492
[2025-11-22 06:41:36] 2025-11-22 11:41:04,607 | INFO     | chi2: 0.09759586192172336
[2025-11-22 06:41:36] 2025-11-22 11:41:04,608 | INFO     | current memory leak: 8.07 B/s (using 704 data points, chi2=0.10)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,608 | INFO     | could have reported an average CPU frequency of 2163 MHz (28 samples)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,608 | INFO     | ..............................
[2025-11-22 06:41:36] 2025-11-22 11:41:04,608 | INFO     | . Timing measurements:
[2025-11-22 06:41:36] 2025-11-22 11:41:04,608 | INFO     | . get job = 0 s
[2025-11-22 06:41:36] 2025-11-22 11:41:04,609 | INFO     | . initial setup = 2 s
[2025-11-22 06:41:36] 2025-11-22 11:41:04,609 | INFO     | . payload setup = 9 s
[2025-11-22 06:41:36] 2025-11-22 11:41:04,609 | INFO     | . stage-in = 0 s
[2025-11-22 06:41:36] 2025-11-22 11:41:04,609 | INFO     | . payload execution = 44828 s
[2025-11-22 06:41:36] 2025-11-22 11:41:04,609 | INFO     | . stage-out = 3 s
[2025-11-22 06:41:36] 2025-11-22 11:41:04,609 | INFO     | . log creation = 0 s
[2025-11-22 06:41:36] 2025-11-22 11:41:04,609 | INFO     | ..............................
[2025-11-22 06:41:36] 2025-11-22 11:41:04,705 | INFO     | 
[2025-11-22 06:41:36] 2025-11-22 11:41:04,705 | INFO     | job summary report
[2025-11-22 06:41:36] 2025-11-22 11:41:04,705 | INFO     | --------------------------------------------------
[2025-11-22 06:41:36] 2025-11-22 11:41:04,705 | INFO     | PanDA job id: 6895323773
[2025-11-22 06:41:36] 2025-11-22 11:41:04,705 | INFO     | task id: 47556137
[2025-11-22 06:41:36] 2025-11-22 11:41:04,705 | INFO     | errors: (none)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 06:41:36] 2025-11-22 11:41:04,706 | INFO     | pilot state: finished 
[2025-11-22 06:41:36] 2025-11-22 11:41:04,706 | INFO     | transexitcode: 0
[2025-11-22 06:41:36] 2025-11-22 11:41:04,706 | INFO     | exeerrorcode: 0
[2025-11-22 06:41:36] 2025-11-22 11:41:04,706 | INFO     | exeerrordiag: 
[2025-11-22 06:41:36] 2025-11-22 11:41:04,706 | INFO     | exitcode: 0
[2025-11-22 06:41:36] 2025-11-22 11:41:04,706 | INFO     | exitmsg: OK
[2025-11-22 06:41:36] 2025-11-22 11:41:04,706 | INFO     | cpuconsumptiontime: 348567 s
[2025-11-22 06:41:36] 2025-11-22 11:41:04,707 | INFO     | nevents: 1000
[2025-11-22 06:41:36] 2025-11-22 11:41:04,707 | INFO     | neventsw: 0
[2025-11-22 06:41:36] 2025-11-22 11:41:04,707 | INFO     | pid: 8485
[2025-11-22 06:41:36] 2025-11-22 11:41:04,707 | INFO     | pgrp: 8485
[2025-11-22 06:41:36] 2025-11-22 11:41:04,707 | INFO     | corecount: 8
[2025-11-22 06:41:36] 2025-11-22 11:41:04,707 | INFO     | event service: False
[2025-11-22 06:41:36] 2025-11-22 11:41:04,708 | INFO     | sizes: {0: 2298577, 1: 2298776, 7: 2299038, 12: 2299066, 44841: 2344931, 44846: 2353925, 44848: 2354109, 44854: 2354355}
[2025-11-22 06:41:36] 2025-11-22 11:41:04,708 | INFO     | --------------------------------------------------
[2025-11-22 06:41:36] 2025-11-22 11:41:04,708 | INFO     | 
[2025-11-22 06:41:36] 2025-11-22 11:41:04,708 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 06:41:36] 2025-11-22 11:41:04,741 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,742 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,742 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,742 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,743 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,743 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,743 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,743 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,744 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,744 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,744 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,744 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 06:41:36] 2025-11-22 11:41:04,745 | INFO     | job 6895323773 has completed (purged errors)
[2025-11-22 06:41:36] 2025-11-22 11:41:04,746 | INFO     | overall cleanup function is called
[2025-11-22 06:41:36] 2025-11-22 11:41:05,762 | INFO     | --- collectZombieJob: --- 10, [8485]
[2025-11-22 06:41:36] 2025-11-22 11:41:05,762 | INFO     | zombie collector waiting for pid 8485
[2025-11-22 06:41:36] 2025-11-22 11:41:05,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 06:41:36] 2025-11-22 11:41:05,762 | INFO     | collected zombie processes
[2025-11-22 06:41:36] 2025-11-22 11:41:05,762 | INFO     | will attempt to kill all subprocesses of pid=8485
[2025-11-22 06:41:36] 2025-11-22 11:41:05,854 | INFO     | process IDs to be killed: [8485] (in reverse order)
[2025-11-22 06:41:36] 2025-11-22 11:41:05,912 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 06:41:36] 2025-11-22 11:41:05,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 06:41:36] 2025-11-22 11:41:05,917 | INFO     | did not find any defunct processes belonging to 8485
[2025-11-22 06:41:36] 2025-11-22 11:41:05,920 | INFO     | did not find any defunct processes belonging to 8485
[2025-11-22 06:41:36] 2025-11-22 11:41:05,923 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 06:41:36] 2025-11-22 11:41:05,923 | INFO     | ready for new job
[2025-11-22 06:41:36] 2025-11-22 11:41:05,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 06:41:36] 2025-11-22 11:41:05,933 | INFO     | ***************************************
[2025-11-22 06:41:36] 2025-11-22 11:41:05,933 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 06:41:36] 2025-11-22 11:41:05,933 | INFO     | ***************************************
[2025-11-22 06:41:36] 2025-11-22 11:41:05,933 | INFO     | 
[2025-11-22 06:41:36] 2025-11-22 11:41:05,934 | INFO     | architecture information:
[2025-11-22 06:41:36] 2025-11-22 11:41:05,935 | INFO     | executing command: cat /etc/os-release
[2025-11-22 06:41:36] 2025-11-22 11:41:05,953 | INFO     | cat /etc/os-release:
[2025-11-22 06:41:36] NAME="CentOS Linux"
[2025-11-22 06:41:36] VERSION="7 (Core)"
[2025-11-22 06:41:36] ID="centos"
[2025-11-22 06:41:36] ID_LIKE="rhel fedora"
[2025-11-22 06:41:36] VERSION_ID="7"
[2025-11-22 06:41:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 06:41:36] ANSI_COLOR="0;31"
[2025-11-22 06:41:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 06:41:36] HOME_URL="https://www.centos.org/"
[2025-11-22 06:41:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 06:41:36] 
[2025-11-22 06:41:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 06:41:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 06:41:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 06:41:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 06:41:36] 
[2025-11-22 06:41:36] 2025-11-22 11:41:05,954 | INFO     | ***************************************
[2025-11-22 06:41:36] 2025-11-22 11:41:06,457 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 06:41:36] 2025-11-22 11:41:06,478 | INFO     | sufficient remaining disk space (17455644672 B)
[2025-11-22 06:41:36] 2025-11-22 11:41:06,479 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 06:41:36] 2025-11-22 11:41:06,479 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 06:41:36] 2025-11-22 11:41:06,479 | INFO     | update_server=False
[2025-11-22 06:41:36] 2025-11-22 11:41:06,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 06:41:36] 2025-11-22 11:41:06,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 06:41:36] 2025-11-22 11:41:06,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 06:41:36] 2025-11-22 11:41:06,481 | INFO     | aborting loop
[2025-11-22 06:41:36] 2025-11-22 11:41:07,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 06:41:36] 2025-11-22 11:41:07,010 | INFO     | all data control threads have been joined
[2025-11-22 06:41:36] 2025-11-22 11:41:07,058 | INFO     | all payload control threads have been joined
[2025-11-22 06:41:36] 2025-11-22 11:41:07,485 | INFO     | [job] retrieve thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:07,486 | INFO     | [job] queue monitor thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:07,486 | INFO     | [job] job monitor thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:07,505 | INFO     | all job control threads have been joined
[2025-11-22 06:41:36] 2025-11-22 11:41:07,535 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:07,884 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:08,015 | INFO     | [data] control thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:08,064 | INFO     | [payload] control thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:08,098 | INFO     | [payload] failed_post thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:08,211 | INFO     | [job] validate thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:08,510 | INFO     | [job] control thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:08,761 | INFO     | [data] copytool_in thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:08,761 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:08,780 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:08,996 | INFO     | [payload] validate_post thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:09,003 | INFO     | [data] copytool_out thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:09,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 06:41:36] 2025-11-22 11:41:13,080 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 06:41:36] 2025-11-22 11:41:27,316 | INFO     | [monitor] cgroup control has ended
[2025-11-22 06:41:36] 2025-11-22 11:41:29,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874847561536)>', '<ExcThread(monitor, started 139874174748416)>']
[2025-11-22 06:41:36] 2025-11-22 11:41:34,033 | INFO     | all workflow threads have been joined
[2025-11-22 06:41:36] 2025-11-22 11:41:34,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 06:41:36] 2025-11-22 11:41:34,034 | INFO     | traces error code: 0
[2025-11-22 06:41:36] 2025-11-22 11:41:34,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 06:41:36] 2025-11-22 11:41:36,063 | INFO     | PID=1983 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 06:41:36] 2025-11-22 11:41:36,063 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 06:41:36] 2025-11-22 11:41:36,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 06:41:36] 2025-11-22 11:41:36,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 06:41:36] 2025-11-22 11:41:36,064 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 06:41:36] 2025-11-22 11:41:36,064 | INFO     | [monitor] control thread has ended
[2025-11-22 06:41:36] 2025-11-22 11:41:36,164 [wrapper] ==== pilot stdout END ====
[2025-11-22 06:41:36] 2025-11-22 11:41:36,170 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 06:41:36] 2025-11-22 11:41:36,174 [wrapper] pilotpid: 1983
[2025-11-22 06:41:36] 2025-11-22 11:41:36,179 [wrapper] Pilot exit status: 0
[2025-11-22 06:41:36] 2025-11-22 11:41:36,196 [wrapper] pandaids: 6895323773
[2025-11-22 06:41:36] 2025-11-22 11:41:36,242 [wrapper] cleanup supervisor_pilot 26969 1984
[2025-11-22 06:41:36] 2025-11-22 11:41:36,247 [wrapper] Test setup, not cleaning
[2025-11-22 06:41:36] 2025-11-22 11:41:36,252 [wrapper] apfmon messages muted
[2025-11-22 06:41:36] 2025-11-22 11:41:36,258 [wrapper] ==== wrapper stdout END ====
[2025-11-22 06:41:36] 2025-11-22 11:41:36,263 [wrapper] ==== wrapper stderr END ====
[2025-11-22 06:41:36]  *** Error codes and diagnostics ***
[2025-11-22 06:41:36]     "exeErrorCode": 0,
[2025-11-22 06:41:36]     "exeErrorDiag": "",
[2025-11-22 06:41:36]     "pilotErrorCode": 0,
[2025-11-22 06:41:36]     "pilotErrorDiag": "",
[2025-11-22 06:41:36]  *** Listing of results directory ***
[2025-11-22 06:41:36] total 1326692
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 08:51 pilot3.tar.gz
[2025-11-22 06:41:36] -rwx------ 1 boincer umatlas     36292 Nov 21 08:59 runpilot2-wrapper.sh
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 08:59 queuedata.json
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas       100 Nov 21 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 06:41:36] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 18:12 run_atlas
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas       105 Nov 21 18:12 job.xml
[2025-11-22 06:41:36] -rw-r--r-- 2 boincer umatlas 410252996 Nov 21 18:12 EVNT.47483658._000010.pool.root.1
[2025-11-22 06:41:36] -rw-r--r-- 2 boincer umatlas    590095 Nov 21 18:12 input.tar.gz
[2025-11-22 06:41:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 18:12 start_atlas.sh
[2025-11-22 06:41:36] drwxrwx--x 2 boincer umatlas      4096 Nov 21 18:12 shared
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas         0 Nov 21 18:12 boinc_lockfile
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas      2781 Nov 21 18:12 pandaJob.out
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas        57 Nov 21 18:12 setup.sh.local
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas    989798 Nov 21 18:13 agis_schedconf.cvmfs.json
[2025-11-22 06:41:36] drwx------ 5 boincer umatlas      4096 Nov 21 18:13 pilot3
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas       532 Nov 22 06:30 boinc_task_state.xml
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 06:36 init_data.xml
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas 928033133 Nov 22 06:40 HITS.47556137._000096.pool.root.1
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas        95 Nov 22 06:40 pilot_heartbeat.json
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas      1062 Nov 22 06:40 memory_monitor_summary.json
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas   1526164 Nov 22 06:40 agis_ddmendpoints.agis.ALL.json
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas   1991099 Nov 22 06:40 log.47556137._000096.job.log.tgz.1
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas      8655 Nov 22 06:41 heartbeat.json
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 06:41 boinc_mmap_file
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas        29 Nov 22 06:41 wrapper_checkpoint.txt
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas       744 Nov 22 06:41 pilotlog.txt
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas   6170696 Nov 22 06:41 log.47556137._000096.job.log.1
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas       353 Nov 22 06:41 output.list
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas       620 Nov 22 06:41 runtime_log
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas   8181760 Nov 22 06:41 result.tar.gz
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 06:41 runtime_log.err
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas       668 Nov 22 06:41 lLOMDmDrgg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3dHKDmMEbD9n.diag
[2025-11-22 06:41:36] -rw-r--r-- 1 boincer umatlas     21320 Nov 22 06:41 stderr.txt
[2025-11-22 06:41:36] HITS file was successfully produced:
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas 928033133 Nov 22 06:40 shared/HITS.pool.root.1
[2025-11-22 06:41:36]  *** Contents of shared directory: ***
[2025-11-22 06:41:36] total 1315516
[2025-11-22 06:41:36] -rw-r--r-- 2 boincer umatlas 410252996 Nov 21 18:12 ATLAS.root_0
[2025-11-22 06:41:36] -rw-r--r-- 2 boincer umatlas    590095 Nov 21 18:12 input.tar.gz
[2025-11-22 06:41:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 18:12 start_atlas.sh
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas 928033133 Nov 22 06:40 HITS.pool.root.1
[2025-11-22 06:41:36] -rw------- 1 boincer umatlas   8181760 Nov 22 06:41 result.tar.gz
06:41:37 (30662): run_atlas exited; CPU time 346331.855372
06:41:37 (30662): called boinc_finish(0)

</stderr_txt>
]]>

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