Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:12:27 (22614): wrapper (7.7.26015): starting
18:12:27 (22614): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 18:12:27] Arguments: --nthreads 8
[2025-11-21 18:12:27] Threads: 8
[2025-11-21 18:12:27] Checking for CVMFS
[2025-11-21 18:12:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 18:12:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 18:12:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 18:12:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 18:12:27] 2.11.2.0 6491 2391 64368 153148 2 90 10922385 18432000 1745 130560 0 2216361 99.992 87205 7767 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 18:12:27] CVMFS is ok
[2025-11-21 18:12:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 18:12:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 18:12:27] Further information can be found at the LHC@home message board.
[2025-11-21 18:12:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 18:12:27] Checking for apptainer binary...
[2025-11-21 18:12:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 18:12:27] Running /usr/bin/apptainer --version
[2025-11-21 18:12:27] apptainer version 1.3.2-1.el7
[2025-11-21 18:12:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 18:12:28] c-206-29.aglt2.org
[2025-11-21 18:12:28] apptainer works
[2025-11-21 18:12:28] Set ATHENA_PROC_NUMBER=8
[2025-11-21 18:12:28] Set ATHENA_CORE_NUMBER=8
[2025-11-21 18:12:28] Starting ATLAS job with PandaID=6893877113
[2025-11-21 18:12:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 14:10:46]  *** The last 200 lines of the pilot log: ***
[2025-11-22 14:10:46] 2025-11-22 19:10:04,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 14:10:46] 2025-11-22 19:10:04,633 | INFO     | time since job start (71844s) is within the limit (172800.0s)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,180 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 14:10:46] 2025-11-22 19:10:05,188 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2361.4583333333335
[2025-11-22 14:10:46] 2025-11-22 19:10:05,194 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893877113/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,194 | INFO     | extracted standard info from prmon json
[2025-11-22 14:10:46] 2025-11-22 19:10:05,195 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 14:10:46] 2025-11-22 19:10:05,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 14:10:46] 2025-11-22 19:10:05,221 | INFO     | fitting pss+swap vs Time
[2025-11-22 14:10:46] 2025-11-22 19:10:05,223 | INFO     | sum of square deviations: 506889374757.6576
[2025-11-22 14:10:46] 2025-11-22 19:10:05,249 | INFO     | sum of deviations: 2552180916577.3438
[2025-11-22 14:10:46] 2025-11-22 19:10:05,249 | INFO     | mean x: 1763802686.0789473
[2025-11-22 14:10:46] 2025-11-22 19:10:05,249 | INFO     | mean y: 2916167.469439728
[2025-11-22 14:10:46] 2025-11-22 19:10:05,249 | INFO     | intersect: -8877805702.407442
[2025-11-22 14:10:46] 2025-11-22 19:10:05,250 | INFO     | chi2: 6.001007103031497
[2025-11-22 14:10:46] 2025-11-22 19:10:05,251 | INFO     | sum of square deviations: 500462476213.476
[2025-11-22 14:10:46] 2025-11-22 19:10:05,276 | INFO     | sum of deviations: 2941516292746.5107
[2025-11-22 14:10:46] 2025-11-22 19:10:05,277 | INFO     | mean x: 1763802533.5814152
[2025-11-22 14:10:46] 2025-11-22 19:10:05,277 | INFO     | mean y: 2925402.188405797
[2025-11-22 14:10:46] 2025-11-22 19:10:05,277 | INFO     | intersect: -10363993470.474924
[2025-11-22 14:10:46] 2025-11-22 19:10:05,278 | INFO     | chi2: 2.903626844571645
[2025-11-22 14:10:46] 2025-11-22 19:10:05,278 | INFO     | current chi2=2.903626844571645 (change=51.614340814480364 %)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,279 | INFO     | sum of square deviations: 494090136831.7775
[2025-11-22 14:10:46] 2025-11-22 19:10:05,305 | INFO     | sum of deviations: 3023311124611.1035
[2025-11-22 14:10:46] 2025-11-22 19:10:05,305 | INFO     | mean x: 1763802381.083904
[2025-11-22 14:10:46] 2025-11-22 19:10:05,305 | INFO     | mean y: 2927356.6010273974
[2025-11-22 14:10:46] 2025-11-22 19:10:05,305 | INFO     | intersect: -10789685089.662153
[2025-11-22 14:10:46] 2025-11-22 19:10:05,306 | INFO     | chi2: 2.6303659473387357
[2025-11-22 14:10:46] 2025-11-22 19:10:05,306 | INFO     | current chi2=2.6303659473387357 (change=9.411019799041084 %)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,307 | INFO     | right removable region: 1167
[2025-11-22 14:10:46] 2025-11-22 19:10:05,308 | INFO     | sum of square deviations: 500462060193.477
[2025-11-22 14:10:46] 2025-11-22 19:10:05,336 | INFO     | sum of deviations: 2226721281408.7437
[2025-11-22 14:10:46] 2025-11-22 19:10:05,336 | INFO     | mean x: 1763802838.5814152
[2025-11-22 14:10:46] 2025-11-22 19:10:05,336 | INFO     | mean y: 2923881.8874680307
[2025-11-22 14:10:46] 2025-11-22 19:10:05,336 | INFO     | intersect: -7844818493.148974
[2025-11-22 14:10:46] 2025-11-22 19:10:05,337 | INFO     | chi2: 3.8269460573186107
[2025-11-22 14:10:46] 2025-11-22 19:10:05,337 | INFO     | current chi2=3.8269460573186107 (change=36.22826982848641 %)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,339 | INFO     | sum of square deviations: 494089447532.1097
[2025-11-22 14:10:46] 2025-11-22 19:10:05,363 | INFO     | sum of deviations: 2124052247905.7405
[2025-11-22 14:10:46] 2025-11-22 19:10:05,363 | INFO     | mean x: 1763802991.0821917
[2025-11-22 14:10:46] 2025-11-22 19:10:05,364 | INFO     | mean y: 2926338.8672945206
[2025-11-22 14:10:46] 2025-11-22 19:10:05,364 | INFO     | intersect: -7579526042.545947
[2025-11-22 14:10:46] 2025-11-22 19:10:05,365 | INFO     | chi2: 3.7213607998905176
[2025-11-22 14:10:46] 2025-11-22 19:10:05,365 | INFO     | current chi2=3.7213607998905176 (change=2.758995184323881 %)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,365 | INFO     | left removable region: 20
[2025-11-22 14:10:46] 2025-11-22 19:10:05,366 | INFO     | sum of square deviations: 467915539343.41077
[2025-11-22 14:10:46] 2025-11-22 19:10:05,390 | INFO     | sum of deviations: 2437580911735.165
[2025-11-22 14:10:46] 2025-11-22 19:10:05,390 | INFO     | mean x: 1763802960.5902355
[2025-11-22 14:10:46] 2025-11-22 19:10:05,390 | INFO     | mean y: 2941361.157802964
[2025-11-22 14:10:46] 2025-11-22 19:10:05,390 | INFO     | intersect: -9185495583.744173
[2025-11-22 14:10:46] 2025-11-22 19:10:05,392 | INFO     | chi2: 0.2559402632719525
[2025-11-22 14:10:46] 2025-11-22 19:10:05,392 | INFO     | current memory leak: 5.21 B/s (using 1147 data points, chi2=0.26)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | could have reported an average CPU frequency of 2626 MHz (43 samples)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | ..............................
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | . Timing measurements:
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | . get job = 0 s
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | . initial setup = 2 s
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | . payload setup = 5 s
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | . stage-in = 0 s
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | . payload execution = 71810 s
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | . stage-out = 3 s
[2025-11-22 14:10:46] 2025-11-22 19:10:05,393 | INFO     | . log creation = 0 s
[2025-11-22 14:10:46] 2025-11-22 19:10:05,394 | INFO     | ..............................
[2025-11-22 14:10:46] 2025-11-22 19:10:05,491 | INFO     | 
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | job summary report
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | --------------------------------------------------
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | PanDA job id: 6893877113
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | task id: 47523449
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | errors: (none)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | pilot state: finished 
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | transexitcode: 0
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | exeerrorcode: 0
[2025-11-22 14:10:46] 2025-11-22 19:10:05,492 | INFO     | exeerrordiag: 
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | exitcode: 0
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | exitmsg: OK
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | cpuconsumptiontime: 552819 s
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | nevents: 1000
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | neventsw: 0
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | pid: 1495
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | pgrp: 1495
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | corecount: 8
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | event service: False
[2025-11-22 14:10:46] 2025-11-22 19:10:05,493 | INFO     | sizes: {0: 2298534, 1: 2298733, 5: 2298995, 12: 2299051, 71819: 2356208, 71824: 2365386, 71829: 2365576}
[2025-11-22 14:10:46] 2025-11-22 19:10:05,494 | INFO     | --------------------------------------------------
[2025-11-22 14:10:46] 2025-11-22 19:10:05,494 | INFO     | 
[2025-11-22 14:10:46] 2025-11-22 19:10:05,494 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 14:10:46] 2025-11-22 19:10:05,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,512 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 14:10:46] 2025-11-22 19:10:05,512 | INFO     | job 6893877113 has completed (purged errors)
[2025-11-22 14:10:46] 2025-11-22 19:10:05,512 | INFO     | overall cleanup function is called
[2025-11-22 14:10:46] 2025-11-22 19:10:06,524 | INFO     | --- collectZombieJob: --- 10, [1495]
[2025-11-22 14:10:46] 2025-11-22 19:10:06,525 | INFO     | zombie collector waiting for pid 1495
[2025-11-22 14:10:46] 2025-11-22 19:10:06,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 14:10:46] 2025-11-22 19:10:06,525 | INFO     | collected zombie processes
[2025-11-22 14:10:46] 2025-11-22 19:10:06,525 | INFO     | will attempt to kill all subprocesses of pid=1495
[2025-11-22 14:10:46] 2025-11-22 19:10:06,694 | INFO     | process IDs to be killed: [1495] (in reverse order)
[2025-11-22 14:10:46] 2025-11-22 19:10:06,765 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 14:10:46] 2025-11-22 19:10:06,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 14:10:46] 2025-11-22 19:10:06,772 | INFO     | did not find any defunct processes belonging to 1495
[2025-11-22 14:10:46] 2025-11-22 19:10:06,777 | INFO     | did not find any defunct processes belonging to 1495
[2025-11-22 14:10:46] 2025-11-22 19:10:06,778 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 14:10:46] 2025-11-22 19:10:06,779 | INFO     | ready for new job
[2025-11-22 14:10:46] 2025-11-22 19:10:06,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 14:10:46] 2025-11-22 19:10:06,784 | INFO     | ***************************************
[2025-11-22 14:10:46] 2025-11-22 19:10:06,784 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 14:10:46] 2025-11-22 19:10:06,784 | INFO     | ***************************************
[2025-11-22 14:10:46] 2025-11-22 19:10:06,784 | INFO     | 
[2025-11-22 14:10:46] 2025-11-22 19:10:06,786 | INFO     | architecture information:
[2025-11-22 14:10:46] 2025-11-22 19:10:06,786 | INFO     | executing command: cat /etc/os-release
[2025-11-22 14:10:46] 2025-11-22 19:10:06,797 | INFO     | cat /etc/os-release:
[2025-11-22 14:10:46] NAME="CentOS Linux"
[2025-11-22 14:10:46] VERSION="7 (Core)"
[2025-11-22 14:10:46] ID="centos"
[2025-11-22 14:10:46] ID_LIKE="rhel fedora"
[2025-11-22 14:10:46] VERSION_ID="7"
[2025-11-22 14:10:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 14:10:46] ANSI_COLOR="0;31"
[2025-11-22 14:10:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 14:10:46] HOME_URL="https://www.centos.org/"
[2025-11-22 14:10:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 14:10:46] 
[2025-11-22 14:10:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 14:10:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 14:10:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 14:10:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 14:10:46] 
[2025-11-22 14:10:46] 2025-11-22 19:10:06,797 | INFO     | ***************************************
[2025-11-22 14:10:46] 2025-11-22 19:10:07,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 14:10:46] 2025-11-22 19:10:07,321 | INFO     | sufficient remaining disk space (26307723264 B)
[2025-11-22 14:10:46] 2025-11-22 19:10:07,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 14:10:46] 2025-11-22 19:10:07,321 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 14:10:46] 2025-11-22 19:10:07,321 | INFO     | update_server=False
[2025-11-22 14:10:46] 2025-11-22 19:10:07,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 14:10:46] 2025-11-22 19:10:07,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 14:10:46] 2025-11-22 19:10:07,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:10:46] 2025-11-22 19:10:07,540 | INFO     | all job control threads have been joined
[2025-11-22 14:10:46] 2025-11-22 19:10:07,936 | INFO     | all data control threads have been joined
[2025-11-22 14:10:46] 2025-11-22 19:10:08,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:10:46] 2025-11-22 19:10:08,023 | INFO     | aborting loop
[2025-11-22 14:10:46] 2025-11-22 19:10:08,272 | INFO     | all payload control threads have been joined
[2025-11-22 14:10:46] 2025-11-22 19:10:08,327 | INFO     | [job] retrieve thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:08,328 | INFO     | [job] queue monitor thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:08,354 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:08,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 14:10:46] 2025-11-22 19:10:08,528 | INFO     | [payload] validate_post thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:08,545 | INFO     | [job] control thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:08,566 | INFO     | [payload] failed_post thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:08,692 | INFO     | [job] validate thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:08,933 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:08,942 | INFO     | [data] control thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:09,028 | INFO     | [job] job monitor thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:09,073 | INFO     | [data] copytool_in thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:09,278 | INFO     | [payload] control thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:09,470 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:10,518 | INFO     | [data] copytool_out thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:11,328 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:17,443 | INFO     | job.realtimelogging is not enabled
[2025-11-22 14:10:46] 2025-11-22 19:10:18,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 14:10:46] 2025-11-22 19:10:37,901 | INFO     | PID=26588 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 14:10:46] 2025-11-22 19:10:37,901 | INFO     | .. there are 3 such processes running
[2025-11-22 14:10:46] 2025-11-22 19:10:37,902 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 14:10:46] 2025-11-22 19:10:37,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 14:10:46] 2025-11-22 19:10:37,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 14:10:46] 2025-11-22 19:10:39,100 | INFO     | [monitor] cgroup control has ended
[2025-11-22 14:10:46] 2025-11-22 19:10:40,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386926217024)>', '<ExcThread(monitor, started 140386467030784)>']
[2025-11-22 14:10:46] 2025-11-22 19:10:40,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 14:10:46] 2025-11-22 19:10:40,917 | INFO     | [monitor] control thread has ended
[2025-11-22 14:10:46] 2025-11-22 19:10:45,825 | INFO     | all workflow threads have been joined
[2025-11-22 14:10:46] 2025-11-22 19:10:45,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 14:10:46] 2025-11-22 19:10:45,826 | INFO     | traces error code: 0
[2025-11-22 14:10:46] 2025-11-22 19:10:45,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 14:10:46] 2025-11-22 19:10:45,956 [wrapper] ==== pilot stdout END ====
[2025-11-22 14:10:46] 2025-11-22 19:10:45,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 14:10:46] 2025-11-22 19:10:45,961 [wrapper] pilotpid: 26588
[2025-11-22 14:10:46] 2025-11-22 19:10:45,964 [wrapper] Pilot exit status: 0
[2025-11-22 14:10:46] 2025-11-22 19:10:45,972 [wrapper] pandaids: 6893877113
[2025-11-22 14:10:46] 2025-11-22 19:10:46,015 [wrapper] cleanup supervisor_pilot 23832 26589
[2025-11-22 14:10:46] 2025-11-22 19:10:46,018 [wrapper] Test setup, not cleaning
[2025-11-22 14:10:46] 2025-11-22 19:10:46,021 [wrapper] apfmon messages muted
[2025-11-22 14:10:46] 2025-11-22 19:10:46,025 [wrapper] ==== wrapper stdout END ====
[2025-11-22 14:10:46] 2025-11-22 19:10:46,047 [wrapper] ==== wrapper stderr END ====
[2025-11-22 14:10:46]  *** Error codes and diagnostics ***
[2025-11-22 14:10:46]     "exeErrorCode": 0,
[2025-11-22 14:10:46]     "exeErrorDiag": "",
[2025-11-22 14:10:46]     "pilotErrorCode": 0,
[2025-11-22 14:10:46]     "pilotErrorDiag": "",
[2025-11-22 14:10:46]  *** Listing of results directory ***
[2025-11-22 14:10:46] total 1336388
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 13:04 pilot3.tar.gz
[2025-11-22 14:10:46] -rwx------ 1 boincer umatlas     36292 Nov 20 13:10 runpilot2-wrapper.sh
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 13:10 queuedata.json
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas       100 Nov 21 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 14:10:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 18:12 run_atlas
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas       105 Nov 21 18:12 job.xml
[2025-11-22 14:10:46] -rw-r--r-- 2 boincer umatlas 410017211 Nov 21 18:12 EVNT.47493127._000788.pool.root.1
[2025-11-22 14:10:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 18:12 start_atlas.sh
[2025-11-22 14:10:46] drwxrwx--x 2 boincer umatlas      4096 Nov 21 18:12 shared
[2025-11-22 14:10:46] -rw-r--r-- 2 boincer umatlas    590101 Nov 21 18:12 input.tar.gz
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas         0 Nov 21 18:12 boinc_lockfile
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas      2784 Nov 21 18:12 pandaJob.out
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas        57 Nov 21 18:12 setup.sh.local
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas    989798 Nov 21 18:12 agis_schedconf.cvmfs.json
[2025-11-22 14:10:46] drwx------ 5 boincer umatlas      4096 Nov 21 18:12 pilot3
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas       533 Nov 22 14:00 boinc_task_state.xml
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas      5954 Nov 22 14:02 init_data.xml
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas 929955034 Nov 22 14:09 HITS.47523449._007880.pool.root.1
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas      1068 Nov 22 14:09 memory_monitor_summary.json
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas   1526164 Nov 22 14:09 agis_ddmendpoints.agis.ALL.json
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas   2338892 Nov 22 14:10 log.47523449._007880.job.log.tgz.1
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas      8678 Nov 22 14:10 heartbeat.json
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas        95 Nov 22 14:10 pilot_heartbeat.json
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 14:10 boinc_mmap_file
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas        29 Nov 22 14:10 wrapper_checkpoint.txt
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas      4893 Nov 22 14:10 pilotlog.txt
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas   9941449 Nov 22 14:10 log.47523449._007880.job.log.1
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas       353 Nov 22 14:10 output.list
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas       620 Nov 22 14:10 runtime_log
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas  12298240 Nov 22 14:10 result.tar.gz
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 14:10 runtime_log.err
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas       668 Nov 22 14:10 4VZNDmlHOg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGOIKDmo93RUn.diag
[2025-11-22 14:10:46] -rw-r--r-- 1 boincer umatlas     21254 Nov 22 14:10 stderr.txt
[2025-11-22 14:10:46] HITS file was successfully produced:
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas 929955034 Nov 22 14:09 shared/HITS.pool.root.1
[2025-11-22 14:10:46]  *** Contents of shared directory: ***
[2025-11-22 14:10:46] total 1321184
[2025-11-22 14:10:46] -rw-r--r-- 2 boincer umatlas 410017211 Nov 21 18:12 ATLAS.root_0
[2025-11-22 14:10:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 18:12 start_atlas.sh
[2025-11-22 14:10:46] -rw-r--r-- 2 boincer umatlas    590101 Nov 21 18:12 input.tar.gz
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas 929955034 Nov 22 14:09 HITS.pool.root.1
[2025-11-22 14:10:46] -rw------- 1 boincer umatlas  12298240 Nov 22 14:10 result.tar.gz
14:10:47 (22614): run_atlas exited; CPU time 551370.852812
14:10:47 (22614): called boinc_finish(0)

</stderr_txt>
]]>

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