Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
03:56:21 (4001594): wrapper (7.7.26015): starting
03:56:21 (4001594): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 03:56:21] Arguments: --nthreads 12
[2025-11-22 03:56:21] Threads: 12
[2025-11-22 03:56:21] Checking for CVMFS
[2025-11-22 03:56:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 03:56:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 03:56:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 03:56:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 03:56:22] 2.11.0.0 7129 1246 122744 153157 2 90 4448770 6144000 22673 130560 0 10420112 99.998 165473 320 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-22 03:56:22] CVMFS is ok
[2025-11-22 03:56:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 03:56:22] Checking for apptainer binary...
[2025-11-22 03:56:22] apptainer is not installed, using version from CVMFS
[2025-11-22 03:56:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 03:56:22] radiat0r
[2025-11-22 03:56:22] apptainer works
[2025-11-22 03:56:22] Set ATHENA_PROC_NUMBER=12
[2025-11-22 03:56:22] Set ATHENA_CORE_NUMBER=12
[2025-11-22 03:56:22] Starting ATLAS job with PandaID=6893889454
[2025-11-22 03:56:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 09:12:15]  *** The last 200 lines of the pilot log: ***
[2025-11-22 09:12:15] 2025-11-22 09:11:11,029 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 09:12:15] 2025-11-22 09:11:11,096 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2401.734210937501
[2025-11-22 09:12:15] 2025-11-22 09:11:11,194 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6893889454/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,195 | INFO     | extracted standard info from prmon json
[2025-11-22 09:12:15] 2025-11-22 09:11:11,195 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 09:12:15] 2025-11-22 09:11:11,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 09:12:15] 2025-11-22 09:11:11,202 | INFO     | fitting pss+swap vs Time
[2025-11-22 09:12:15] 2025-11-22 09:11:11,202 | INFO     | sum of square deviations: 9148433286.608452
[2025-11-22 09:12:15] 2025-11-22 09:11:11,205 | INFO     | sum of deviations: 225182764573.4107
[2025-11-22 09:12:15] 2025-11-22 09:11:11,205 | INFO     | mean x: 1763793229.9644012
[2025-11-22 09:12:15] 2025-11-22 09:11:11,206 | INFO     | mean y: 3361353.491909385
[2025-11-22 09:12:15] 2025-11-22 09:11:11,206 | INFO     | intersect: -43411267492.37162
[2025-11-22 09:12:15] 2025-11-22 09:11:11,206 | INFO     | chi2: 6.7848440727636214
[2025-11-22 09:12:15] 2025-11-22 09:11:11,207 | INFO     | sum of square deviations: 8711567141.881588
[2025-11-22 09:12:15] 2025-11-22 09:11:11,210 | INFO     | sum of deviations: 349787616714.2831
[2025-11-22 09:12:15] 2025-11-22 09:11:11,210 | INFO     | mean x: 1763793077.4802632
[2025-11-22 09:12:15] 2025-11-22 09:11:11,210 | INFO     | mean y: 3404793.9638157897
[2025-11-22 09:12:15] 2025-11-22 09:11:11,211 | INFO     | intersect: -70816571325.24887
[2025-11-22 09:12:15] 2025-11-22 09:11:11,211 | INFO     | chi2: 3.3179422090520583
[2025-11-22 09:12:15] 2025-11-22 09:11:11,211 | INFO     | current chi2=3.3179422090520583 (change=51.09773823143168 %)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,212 | INFO     | sum of square deviations: 8288785533.946472
[2025-11-22 09:12:15] 2025-11-22 09:11:11,215 | INFO     | sum of deviations: 369160012327.6389
[2025-11-22 09:12:15] 2025-11-22 09:11:11,221 | INFO     | mean x: 1763792924.986622
[2025-11-22 09:12:15] 2025-11-22 09:11:11,222 | INFO     | mean y: 3411689.9096989967
[2025-11-22 09:12:15] 2025-11-22 09:11:11,222 | INFO     | intersect: -78551138342.15639
[2025-11-22 09:12:15] 2025-11-22 09:11:11,222 | INFO     | chi2: 2.9850641180229025
[2025-11-22 09:12:15] 2025-11-22 09:11:11,223 | INFO     | current chi2=2.9850641180229025 (change=10.032666937989243 %)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,223 | INFO     | right removable region: 298
[2025-11-22 09:12:15] 2025-11-22 09:11:11,223 | INFO     | sum of square deviations: 8711403967.838806
[2025-11-22 09:12:15] 2025-11-22 09:11:11,226 | INFO     | sum of deviations: 112413494883.4015
[2025-11-22 09:12:15] 2025-11-22 09:11:11,226 | INFO     | mean x: 1763793382.4769738
[2025-11-22 09:12:15] 2025-11-22 09:11:11,227 | INFO     | mean y: 3400582.914473684
[2025-11-22 09:12:15] 2025-11-22 09:11:11,227 | INFO     | intersect: -22756900639.30541
[2025-11-22 09:12:15] 2025-11-22 09:11:11,227 | INFO     | chi2: 4.030907178041781
[2025-11-22 09:12:15] 2025-11-22 09:11:11,228 | INFO     | current chi2=4.030907178041781 (change=40.58953846525317 %)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,228 | INFO     | sum of square deviations: 8288588872.836115
[2025-11-22 09:12:15] 2025-11-22 09:11:11,231 | INFO     | sum of deviations: 84023760196.98662
[2025-11-22 09:12:15] 2025-11-22 09:11:11,231 | INFO     | mean x: 1763793534.9765887
[2025-11-22 09:12:15] 2025-11-22 09:11:11,231 | INFO     | mean y: 3410807.712374582
[2025-11-22 09:12:15] 2025-11-22 09:11:11,231 | INFO     | intersect: -17876661095.18541
[2025-11-22 09:12:15] 2025-11-22 09:11:11,232 | INFO     | chi2: 3.9413483889126653
[2025-11-22 09:12:15] 2025-11-22 09:11:11,232 | INFO     | current chi2=3.9413483889126653 (change=2.2218023182717848 %)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,232 | INFO     | left removable region: 20
[2025-11-22 09:12:15] 2025-11-22 09:11:11,233 | INFO     | sum of square deviations: 6662039329.5
[2025-11-22 09:12:15] 2025-11-22 09:11:11,235 | INFO     | sum of deviations: 189100245189.49997
[2025-11-22 09:12:15] 2025-11-22 09:11:11,235 | INFO     | mean x: 1763793504.5
[2025-11-22 09:12:15] 2025-11-22 09:11:11,235 | INFO     | mean y: 3479081.4424460432
[2025-11-22 09:12:15] 2025-11-22 09:11:11,236 | INFO     | intersect: -50061338561.960724
[2025-11-22 09:12:15] 2025-11-22 09:11:11,236 | INFO     | chi2: 0.031253346985755145
[2025-11-22 09:12:15] 2025-11-22 09:11:11,236 | INFO     | current memory leak: 28.38 B/s (using 278 data points, chi2=0.03)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,237 | INFO     | could have reported an average CPU frequency of 2403 MHz (14 samples)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,237 | INFO     | ..............................
[2025-11-22 09:12:15] 2025-11-22 09:11:11,237 | INFO     | . Timing measurements:
[2025-11-22 09:12:15] 2025-11-22 09:11:11,238 | INFO     | . get job = 0 s
[2025-11-22 09:12:15] 2025-11-22 09:11:11,238 | INFO     | . initial setup = 2 s
[2025-11-22 09:12:15] 2025-11-22 09:11:11,238 | INFO     | . payload setup = 9 s
[2025-11-22 09:12:15] 2025-11-22 09:11:11,238 | INFO     | . stage-in = 0 s
[2025-11-22 09:12:15] 2025-11-22 09:11:11,238 | INFO     | . payload execution = 18823 s
[2025-11-22 09:12:15] 2025-11-22 09:11:11,238 | INFO     | . stage-out = 2 s
[2025-11-22 09:12:15] 2025-11-22 09:11:11,238 | INFO     | . log creation = 0 s
[2025-11-22 09:12:15] 2025-11-22 09:11:11,239 | INFO     | ..............................
[2025-11-22 09:12:15] 2025-11-22 09:11:11,369 | INFO     | 
[2025-11-22 09:12:15] 2025-11-22 09:11:11,369 | INFO     | job summary report
[2025-11-22 09:12:15] 2025-11-22 09:11:11,369 | INFO     | --------------------------------------------------
[2025-11-22 09:12:15] 2025-11-22 09:11:11,370 | INFO     | PanDA job id: 6893889454
[2025-11-22 09:12:15] 2025-11-22 09:11:11,370 | INFO     | task id: 47523449
[2025-11-22 09:12:15] 2025-11-22 09:11:11,370 | INFO     | errors: (none)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 09:12:15] 2025-11-22 09:11:11,370 | INFO     | pilot state: finished 
[2025-11-22 09:12:15] 2025-11-22 09:11:11,370 | INFO     | transexitcode: 0
[2025-11-22 09:12:15] 2025-11-22 09:11:11,371 | INFO     | exeerrorcode: 0
[2025-11-22 09:12:15] 2025-11-22 09:11:11,371 | INFO     | exeerrordiag: 
[2025-11-22 09:12:15] 2025-11-22 09:11:11,371 | INFO     | exitcode: 0
[2025-11-22 09:12:15] 2025-11-22 09:11:11,371 | INFO     | exitmsg: OK
[2025-11-22 09:12:15] 2025-11-22 09:11:11,371 | INFO     | cpuconsumptiontime: 219746 s
[2025-11-22 09:12:15] 2025-11-22 09:11:11,371 | INFO     | nevents: 1000
[2025-11-22 09:12:15] 2025-11-22 09:11:11,371 | INFO     | neventsw: 0
[2025-11-22 09:12:15] 2025-11-22 09:11:11,372 | INFO     | pid: 4014512
[2025-11-22 09:12:15] 2025-11-22 09:11:11,372 | INFO     | pgrp: 4014512
[2025-11-22 09:12:15] 2025-11-22 09:11:11,372 | INFO     | corecount: 12
[2025-11-22 09:12:15] 2025-11-22 09:11:11,372 | INFO     | event service: False
[2025-11-22 09:12:15] 2025-11-22 09:11:11,372 | INFO     | sizes: {0: 2298808, 8: 2299070, 11: 2299098, 18837: 2331989, 18841: 2340985, 18843: 2341041, 18854: 2341415}
[2025-11-22 09:12:15] 2025-11-22 09:11:11,372 | INFO     | --------------------------------------------------
[2025-11-22 09:12:15] 2025-11-22 09:11:11,372 | INFO     | 
[2025-11-22 09:12:15] 2025-11-22 09:11:11,373 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-22 09:12:15] 2025-11-22 09:11:11,404 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,405 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,405 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 09:12:15] 2025-11-22 09:11:11,407 | INFO     | job 6893889454 has completed (purged errors)
[2025-11-22 09:12:15] 2025-11-22 09:11:11,408 | INFO     | overall cleanup function is called
[2025-11-22 09:12:15] 2025-11-22 09:11:12,443 | INFO     | --- collectZombieJob: --- 10, [4014512]
[2025-11-22 09:12:15] 2025-11-22 09:11:12,444 | INFO     | zombie collector waiting for pid 4014512
[2025-11-22 09:12:15] 2025-11-22 09:11:12,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 09:12:15] 2025-11-22 09:11:12,444 | INFO     | collected zombie processes
[2025-11-22 09:12:15] 2025-11-22 09:11:12,444 | INFO     | will attempt to kill all subprocesses of pid=4014512
[2025-11-22 09:12:15] 2025-11-22 09:11:12,646 | INFO     | PID=4006301 has CPU usage=26.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-22 09:12:15] 2025-11-22 09:11:12,647 | INFO     | .. there are 14 such processes running
[2025-11-22 09:12:15] 2025-11-22 09:11:13,569 | INFO     | process IDs to be killed: [4014512] (in reverse order)
[2025-11-22 09:12:15] 2025-11-22 09:11:13,858 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 09:12:15] 2025-11-22 09:11:13,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 09:12:15] 2025-11-22 09:11:13,892 | INFO     | did not find any defunct processes belonging to 4014512
[2025-11-22 09:12:15] 2025-11-22 09:11:13,925 | INFO     | did not find any defunct processes belonging to 4014512
[2025-11-22 09:12:15] 2025-11-22 09:11:13,927 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 09:12:15] 2025-11-22 09:11:13,928 | INFO     | ready for new job
[2025-11-22 09:12:15] 2025-11-22 09:11:13,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 09:12:15] 2025-11-22 09:11:13,931 | INFO     | ***************************************
[2025-11-22 09:12:15] 2025-11-22 09:11:13,931 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 09:12:15] 2025-11-22 09:11:13,931 | INFO     | ***************************************
[2025-11-22 09:12:15] 2025-11-22 09:11:13,931 | INFO     | 
[2025-11-22 09:12:15] 2025-11-22 09:11:13,973 | INFO     | architecture information:
[2025-11-22 09:12:15] 2025-11-22 09:11:13,975 | INFO     | executing command: cat /etc/os-release
[2025-11-22 09:12:15] 2025-11-22 09:11:14,002 | INFO     | cat /etc/os-release:
[2025-11-22 09:12:15] NAME="CentOS Linux"
[2025-11-22 09:12:15] VERSION="7 (Core)"
[2025-11-22 09:12:15] ID="centos"
[2025-11-22 09:12:15] ID_LIKE="rhel fedora"
[2025-11-22 09:12:15] VERSION_ID="7"
[2025-11-22 09:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 09:12:15] ANSI_COLOR="0;31"
[2025-11-22 09:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 09:12:15] HOME_URL="https://www.centos.org/"
[2025-11-22 09:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 09:12:15] 
[2025-11-22 09:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 09:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 09:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 09:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 09:12:15] 
[2025-11-22 09:12:15] 2025-11-22 09:11:14,002 | INFO     | ***************************************
[2025-11-22 09:12:15] 2025-11-22 09:11:14,505 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-22 09:12:15] 2025-11-22 09:11:14,534 | INFO     | sufficient remaining disk space (1538457075712 B)
[2025-11-22 09:12:15] 2025-11-22 09:11:14,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 09:12:15] 2025-11-22 09:11:14,535 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 09:12:15] 2025-11-22 09:11:14,535 | INFO     | update_server=False
[2025-11-22 09:12:15] 2025-11-22 09:11:14,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 09:12:15] 2025-11-22 09:11:14,863 | INFO     | all job control threads have been joined
[2025-11-22 09:12:15] 2025-11-22 09:11:14,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 09:12:15] 2025-11-22 09:11:15,062 | INFO     | all data control threads have been joined
[2025-11-22 09:12:15] 2025-11-22 09:11:15,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 09:12:15] 2025-11-22 09:11:15,412 | INFO     | aborting loop
[2025-11-22 09:12:15] 2025-11-22 09:11:15,488 | INFO     | all payload control threads have been joined
[2025-11-22 09:12:15] 2025-11-22 09:11:15,537 | INFO     | [job] retrieve thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:15,613 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:15,665 | INFO     | [data] copytool_in thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:15,793 | INFO     | [job] validate thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:15,801 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:15,869 | INFO     | [job] control thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:16,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 09:12:15] 2025-11-22 09:11:16,067 | INFO     | [data] control thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:16,183 | INFO     | [payload] validate_post thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:16,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 09:12:15] 2025-11-22 09:11:16,417 | INFO     | [job] job monitor thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:16,494 | INFO     | [payload] control thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:16,587 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:16,641 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:16,829 | INFO     | [payload] failed_post thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:17,358 | INFO     | [job] queue monitor thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:18,027 | INFO     | [data] copytool_out thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:18,897 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 09:12:15] 2025-11-22 09:11:35,862 [wrapper] supervise_pilot (15 min periods counter: 22)
[2025-11-22 09:12:15] 2025-11-22 09:11:45,704 | INFO     | PID=4006301 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 09:12:15] 2025-11-22 09:11:45,705 | INFO     | .. there are 14 such processes running
[2025-11-22 09:12:15] 2025-11-22 09:11:45,705 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 09:12:15] 2025-11-22 09:11:45,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 09:12:15] 2025-11-22 09:11:45,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 09:12:15] 2025-11-22 09:12:08,833 | INFO     | [monitor] cgroup control has ended
[2025-11-22 09:12:15] 2025-11-22 09:12:09,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203169457984)>', '<ExcThread(monitor, started 140202731353856)>']
[2025-11-22 09:12:15] 2025-11-22 09:12:09,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 09:12:15] 2025-11-22 09:12:09,821 | INFO     | [monitor] control thread has ended
[2025-11-22 09:12:15] 2025-11-22 09:12:14,721 | INFO     | all workflow threads have been joined
[2025-11-22 09:12:15] 2025-11-22 09:12:14,721 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 09:12:15] 2025-11-22 09:12:14,722 | INFO     | traces error code: 0
[2025-11-22 09:12:15] 2025-11-22 09:12:14,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 09:12:15] 2025-11-22 09:12:14,893 [wrapper] ==== pilot stdout END ====
[2025-11-22 09:12:15] 2025-11-22 09:12:14,897 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 09:12:15] 2025-11-22 09:12:14,900 [wrapper] pilotpid: 4006301
[2025-11-22 09:12:15] 2025-11-22 09:12:14,903 [wrapper] Pilot exit status: 0
[2025-11-22 09:12:15] 2025-11-22 09:12:14,918 [wrapper] pandaids: 6893889454
[2025-11-22 09:12:15] 2025-11-22 09:12:15,127 [wrapper] cleanup supervisor_pilot  551604 4006302
[2025-11-22 09:12:15] 2025-11-22 09:12:15,131 [wrapper] Test setup, not cleaning
[2025-11-22 09:12:15] 2025-11-22 09:12:15,135 [wrapper] apfmon messages muted
[2025-11-22 09:12:15] 2025-11-22 09:12:15,139 [wrapper] ==== wrapper stdout END ====
[2025-11-22 09:12:15] 2025-11-22 09:12:15,142 [wrapper] ==== wrapper stderr END ====
[2025-11-22 09:12:15]  *** Error codes and diagnostics ***
[2025-11-22 09:12:15]     "exeErrorCode": 0,
[2025-11-22 09:12:15]     "exeErrorDiag": "",
[2025-11-22 09:12:15]     "pilotErrorCode": 0,
[2025-11-22 09:12:15]     "pilotErrorDiag": "",
[2025-11-22 09:12:15]  *** Listing of results directory ***
[2025-11-22 09:12:15] total 1301644
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc    576529 Nov 20 23:11 pilot3.tar.gz
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc      5112 Nov 20 23:53 queuedata.json
[2025-11-22 09:12:15] -rwx------ 1 boinc boinc     36292 Nov 20 23:54 runpilot2-wrapper.sh
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc       100 Nov 22 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 09:12:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 03:56 run_atlas
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc       105 Nov 22 03:56 job.xml
[2025-11-22 09:12:15] -rw-r--r-- 2 boinc boinc     15847 Nov 22 03:56 start_atlas.sh
[2025-11-22 09:12:15] drwxrwx--x 2 boinc boinc      4096 Nov 22 03:56 shared
[2025-11-22 09:12:15] -rw-r--r-- 2 boinc boinc    590104 Nov 22 03:56 input.tar.gz
[2025-11-22 09:12:15] -rw-r--r-- 2 boinc boinc 410226328 Nov 22 03:56 EVNT.47493127._000993.pool.root.1
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc         0 Nov 22 03:56 boinc_setup_complete
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc      9416 Nov 22 03:56 init_data.xml
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc         0 Nov 22 03:56 boinc_lockfile
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc      2786 Nov 22 03:56 pandaJob.out
[2025-11-22 09:12:15] -rw------- 1 boinc boinc    989752 Nov 22 03:56 agis_schedconf.cvmfs.json
[2025-11-22 09:12:15] drwx------ 5 boinc boinc      4096 Nov 22 03:56 pilot3
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc       533 Nov 22 09:02 boinc_task_state.xml
[2025-11-22 09:12:15] -rw------- 1 boinc boinc 909413512 Nov 22 09:10 HITS.47523449._009926.pool.root.1
[2025-11-22 09:12:15] -rw------- 1 boinc boinc      1043 Nov 22 09:10 memory_monitor_summary.json
[2025-11-22 09:12:15] -rw------- 1 boinc boinc   1526164 Nov 22 09:10 agis_ddmendpoints.agis.ALL.json
[2025-11-22 09:12:15] -rw------- 1 boinc boinc   2080261 Nov 22 09:10 log.47523449._009926.job.log.tgz.1
[2025-11-22 09:12:15] -rw------- 1 boinc boinc      7901 Nov 22 09:11 heartbeat.json
[2025-11-22 09:12:15] -rw------- 1 boinc boinc        95 Nov 22 09:11 pilot_heartbeat.json
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc        29 Nov 22 09:12 wrapper_checkpoint.txt
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc      8192 Nov 22 09:12 boinc_mmap_file
[2025-11-22 09:12:15] -rw------- 1 boinc boinc      4827 Nov 22 09:12 pilotlog.txt
[2025-11-22 09:12:15] -rw------- 1 boinc boinc   2582603 Nov 22 09:12 log.47523449._009926.job.log.1
[2025-11-22 09:12:15] -rw------- 1 boinc boinc       353 Nov 22 09:12 output.list
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc       620 Nov 22 09:12 runtime_log
[2025-11-22 09:12:15] -rw------- 1 boinc boinc   4679680 Nov 22 09:12 result.tar.gz
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc      8789 Nov 22 09:12 runtime_log.err
[2025-11-22 09:12:15] -rw------- 1 boinc boinc       651 Nov 22 09:12 DWNLDmHfTg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJhIKDmY5hJwm.diag
[2025-11-22 09:12:15] -rw-r--r-- 1 boinc boinc     21070 Nov 22 09:12 stderr.txt
[2025-11-22 09:12:15] HITS file was successfully produced:
[2025-11-22 09:12:15] -rw------- 1 boinc boinc 909413512 Nov 22 09:10 shared/HITS.pool.root.1
[2025-11-22 09:12:15]  *** Contents of shared directory: ***
[2025-11-22 09:12:15] total 1293888
[2025-11-22 09:12:15] -rw-r--r-- 2 boinc boinc     15847 Nov 22 03:56 start_atlas.sh
[2025-11-22 09:12:15] -rw-r--r-- 2 boinc boinc    590104 Nov 22 03:56 input.tar.gz
[2025-11-22 09:12:15] -rw-r--r-- 2 boinc boinc 410226328 Nov 22 03:56 ATLAS.root_0
[2025-11-22 09:12:15] -rw------- 1 boinc boinc 909413512 Nov 22 09:10 HITS.pool.root.1
[2025-11-22 09:12:15] -rw------- 1 boinc boinc   4679680 Nov 22 09:12 result.tar.gz
09:12:17 (4001594): run_atlas exited; CPU time 220624.283003
09:12:17 (4001594): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN