Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:39:42 (1393429): wrapper (7.7.26015): starting
19:39:42 (1393429): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 19:39:42] Arguments: --nthreads 3
[2025-11-24 19:39:42] Threads: 3
[2025-11-24 19:39:42] Checking for CVMFS
[2025-11-24 19:39:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:39:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:39:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:39:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:39:42] 2.9.2.0 148071 9342 94076 153255 0 81 27531918 36864000 0 130560 0 3451868 99.927 490430 5993 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 19:39:42] CVMFS is ok
[2025-11-24 19:39:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 19:39:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 19:39:42] Further information can be found at the LHC@home message board.
[2025-11-24 19:39:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:39:42] Checking for apptainer binary...
[2025-11-24 19:39:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:39:42] Running /usr/bin/apptainer --version
[2025-11-24 19:39:42] apptainer version 1.4.1-1.1
[2025-11-24 19:39:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:39:42] legendA257
[2025-11-24 19:39:42] apptainer works
[2025-11-24 19:39:42] Set ATHENA_PROC_NUMBER=3
[2025-11-24 19:39:42] Set ATHENA_CORE_NUMBER=3
[2025-11-24 19:39:42] Starting ATLAS job with PandaID=6894268500
[2025-11-24 19:39:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 03:50:51]  *** The last 200 lines of the pilot log: ***
[2025-11-25 03:50:51] 2025-11-25 02:50:17,530 | INFO     | monitor loop #2241: job 0:6894268500 is in state 'finished'
[2025-11-25 03:50:51] 2025-11-25 02:50:17,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 03:50:51] 2025-11-25 02:50:18,294 | INFO     | time since job start (29430s) is within the limit (172800.0s)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,120 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 03:50:51] 2025-11-25 02:50:19,121 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3673.4911666666667
[2025-11-25 03:50:51] 2025-11-25 02:50:19,122 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894268500/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,123 | INFO     | extracted standard info from prmon json
[2025-11-25 03:50:51] 2025-11-25 02:50:19,123 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 03:50:51] 2025-11-25 02:50:19,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 03:50:51] 2025-11-25 02:50:19,125 | INFO     | fitting pss+swap vs Time
[2025-11-25 03:50:51] 2025-11-25 02:50:19,126 | INFO     | sum of square deviations: 34723034300.5
[2025-11-25 03:50:51] 2025-11-25 02:50:19,127 | INFO     | sum of deviations: 228796550197.99988
[2025-11-25 03:50:51] 2025-11-25 02:50:19,128 | INFO     | mean x: 1764024278.5
[2025-11-25 03:50:51] 2025-11-25 02:50:19,128 | INFO     | mean y: 2208571.1701244814
[2025-11-25 03:50:51] 2025-11-25 02:50:19,128 | INFO     | intersect: -11621276458.780268
[2025-11-25 03:50:51] 2025-11-25 02:50:19,128 | INFO     | chi2: 3.1857413680633484
[2025-11-25 03:50:51] 2025-11-25 02:50:19,128 | INFO     | sum of square deviations: 33653609598.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,130 | INFO     | sum of deviations: 274134765916.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,130 | INFO     | mean x: 1764024126.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,130 | INFO     | mean y: 2214998.171907757
[2025-11-25 03:50:51] 2025-11-25 02:50:19,130 | INFO     | intersect: -14367130419.08536
[2025-11-25 03:50:51] 2025-11-25 02:50:19,130 | INFO     | chi2: 2.2612300795067672
[2025-11-25 03:50:51] 2025-11-25 02:50:19,130 | INFO     | current chi2=2.2612300795067672 (change=29.020287014655022 %)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,131 | INFO     | sum of square deviations: 32606371358.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,132 | INFO     | sum of deviations: 268940250678.49997
[2025-11-25 03:50:51] 2025-11-25 02:50:19,132 | INFO     | mean x: 1764023973.5
[2025-11-25 03:50:51] 2025-11-25 02:50:19,132 | INFO     | mean y: 2214241.8241525423
[2025-11-25 03:50:51] 2025-11-25 02:50:19,132 | INFO     | intersect: -14547612368.04714
[2025-11-25 03:50:51] 2025-11-25 02:50:19,133 | INFO     | chi2: 2.2607242891963297
[2025-11-25 03:50:51] 2025-11-25 02:50:19,133 | INFO     | current chi2=2.2607242891963297 (change=0.022367927749653894 %)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,133 | INFO     | right removable region: 471
[2025-11-25 03:50:51] 2025-11-25 02:50:19,133 | INFO     | sum of square deviations: 33653609598.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,135 | INFO     | sum of deviations: 128929480805.99998
[2025-11-25 03:50:51] 2025-11-25 02:50:19,135 | INFO     | mean x: 1764024431.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,135 | INFO     | mean y: 2222791.2914046124
[2025-11-25 03:50:51] 2025-11-25 02:50:19,135 | INFO     | intersect: -6755885974.296871
[2025-11-25 03:50:51] 2025-11-25 02:50:19,135 | INFO     | chi2: 1.1441336970348095
[2025-11-25 03:50:51] 2025-11-25 02:50:19,135 | INFO     | current chi2=1.1441336970348095 (change=64.08579464407865 %)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,135 | INFO     | sum of square deviations: 32606371358.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,137 | INFO     | sum of deviations: 105611908238.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,137 | INFO     | mean x: 1764024583.5
[2025-11-25 03:50:51] 2025-11-25 02:50:19,137 | INFO     | mean y: 2226172.470338983
[2025-11-25 03:50:51] 2025-11-25 02:50:19,137 | INFO     | intersect: -5711442496.658304
[2025-11-25 03:50:51] 2025-11-25 02:50:19,137 | INFO     | chi2: 0.9848251819691862
[2025-11-25 03:50:51] 2025-11-25 02:50:19,138 | INFO     | current chi2=0.9848251819691862 (change=13.923942234941133 %)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,138 | INFO     | left removable region: 20
[2025-11-25 03:50:51] 2025-11-25 02:50:19,138 | INFO     | sum of square deviations: 28444998450.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,139 | INFO     | sum of deviations: 130883459280.00002
[2025-11-25 03:50:51] 2025-11-25 02:50:19,139 | INFO     | mean x: 1764024553.0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,139 | INFO     | mean y: 2234737.421286031
[2025-11-25 03:50:51] 2025-11-25 02:50:19,139 | INFO     | intersect: -8114539681.01767
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | chi2: 0.04835350479269765
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | current memory leak: 4.60 B/s (using 451 data points, chi2=0.05)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | could have reported an average CPU frequency of 3895 MHz (20 samples)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | ..............................
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | . Timing measurements:
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | . get job = 0 s
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | . initial setup = 1 s
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | . payload setup = 2 s
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | . stage-in = 0 s
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | . payload execution = 29404 s
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | . stage-out = 1 s
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | . log creation = 0 s
[2025-11-25 03:50:51] 2025-11-25 02:50:19,140 | INFO     | ..............................
[2025-11-25 03:50:51] 2025-11-25 02:50:19,449 | INFO     | 
[2025-11-25 03:50:51] 2025-11-25 02:50:19,449 | INFO     | job summary report
[2025-11-25 03:50:51] 2025-11-25 02:50:19,449 | INFO     | --------------------------------------------------
[2025-11-25 03:50:51] 2025-11-25 02:50:19,449 | INFO     | PanDA job id: 6894268500
[2025-11-25 03:50:51] 2025-11-25 02:50:19,449 | INFO     | task id: 47533967
[2025-11-25 03:50:51] 2025-11-25 02:50:19,449 | INFO     | errors: (none)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 03:50:51] 2025-11-25 02:50:19,449 | INFO     | pilot state: finished 
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | transexitcode: 0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | exeerrorcode: 0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | exeerrordiag: 
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | exitcode: 0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | exitmsg: OK
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | cpuconsumptiontime: 86917 s
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | nevents: 1000
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | neventsw: 0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | pid: 1403595
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | pgrp: 1403595
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | corecount: 3
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | event service: False
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | sizes: {0: 2284313, 3: 2284575, 11: 2284603, 29411: 2323736, 29413: 2332736, 29415: 2332792, 29418: 2333166}
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | --------------------------------------------------
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | 
[2025-11-25 03:50:51] 2025-11-25 02:50:19,450 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-25 03:50:51] 2025-11-25 02:50:19,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | job 6894268500 has completed (purged errors)
[2025-11-25 03:50:51] 2025-11-25 02:50:19,465 | INFO     | overall cleanup function is called
[2025-11-25 03:50:51] 2025-11-25 02:50:20,474 | INFO     | --- collectZombieJob: --- 10, [1403595]
[2025-11-25 03:50:51] 2025-11-25 02:50:20,475 | INFO     | zombie collector waiting for pid 1403595
[2025-11-25 03:50:51] 2025-11-25 02:50:20,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 03:50:51] 2025-11-25 02:50:20,475 | INFO     | collected zombie processes
[2025-11-25 03:50:51] 2025-11-25 02:50:20,475 | INFO     | will attempt to kill all subprocesses of pid=1403595
[2025-11-25 03:50:51] 2025-11-25 02:50:20,517 | INFO     | process IDs to be killed: [1403595] (in reverse order)
[2025-11-25 03:50:51] 2025-11-25 02:50:20,541 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 03:50:51] 2025-11-25 02:50:20,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 03:50:51] 2025-11-25 02:50:20,542 | INFO     | did not find any defunct processes belonging to 1403595
[2025-11-25 03:50:51] 2025-11-25 02:50:20,543 | INFO     | did not find any defunct processes belonging to 1403595
[2025-11-25 03:50:51] 2025-11-25 02:50:20,544 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 03:50:51] 2025-11-25 02:50:20,544 | INFO     | ready for new job
[2025-11-25 03:50:51] 2025-11-25 02:50:20,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 03:50:51] 2025-11-25 02:50:20,545 | INFO     | ***************************************
[2025-11-25 03:50:51] 2025-11-25 02:50:20,545 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 03:50:51] 2025-11-25 02:50:20,545 | INFO     | ***************************************
[2025-11-25 03:50:51] 2025-11-25 02:50:20,545 | INFO     | 
[2025-11-25 03:50:51] 2025-11-25 02:50:20,546 | INFO     | architecture information:
[2025-11-25 03:50:51] 2025-11-25 02:50:20,546 | INFO     | executing command: cat /etc/os-release
[2025-11-25 03:50:51] 2025-11-25 02:50:20,554 | INFO     | cat /etc/os-release:
[2025-11-25 03:50:51] NAME="CentOS Linux"
[2025-11-25 03:50:51] VERSION="7 (Core)"
[2025-11-25 03:50:51] ID="centos"
[2025-11-25 03:50:51] ID_LIKE="rhel fedora"
[2025-11-25 03:50:51] VERSION_ID="7"
[2025-11-25 03:50:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 03:50:51] ANSI_COLOR="0;31"
[2025-11-25 03:50:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 03:50:51] HOME_URL="https://www.centos.org/"
[2025-11-25 03:50:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 03:50:51] 
[2025-11-25 03:50:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 03:50:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 03:50:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 03:50:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 03:50:51] 
[2025-11-25 03:50:51] 2025-11-25 02:50:20,555 | INFO     | ***************************************
[2025-11-25 03:50:51] 2025-11-25 02:50:21,058 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 03:50:51] 2025-11-25 02:50:21,070 | INFO     | sufficient remaining disk space (329239232512 B)
[2025-11-25 03:50:51] 2025-11-25 02:50:21,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 03:50:51] 2025-11-25 02:50:21,071 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 03:50:51] 2025-11-25 02:50:21,071 | INFO     | update_server=False
[2025-11-25 03:50:51] 2025-11-25 02:50:21,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 03:50:51] 2025-11-25 02:50:21,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:50:51] 2025-11-25 02:50:21,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:50:51] 2025-11-25 02:50:21,071 | INFO     | aborting loop
[2025-11-25 03:50:51] 2025-11-25 02:50:21,696 | INFO     | all payload control threads have been joined
[2025-11-25 03:50:51] 2025-11-25 02:50:21,733 | INFO     | all job control threads have been joined
[2025-11-25 03:50:51] 2025-11-25 02:50:21,733 | INFO     | all data control threads have been joined
[2025-11-25 03:50:51] 2025-11-25 02:50:22,076 | INFO     | [job] queue monitor thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:22,077 | INFO     | [job] retrieve thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:22,077 | INFO     | [job] job monitor thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:22,169 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:22,258 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:22,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 03:50:51] 2025-11-25 02:50:22,702 | INFO     | [payload] control thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:22,739 | INFO     | [data] control thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:22,739 | INFO     | [job] control thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:22,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 03:50:51] 2025-11-25 02:50:22,889 | INFO     | [payload] validate_post thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:22,963 | INFO     | [data] copytool_in thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:23,306 | INFO     | [payload] failed_post thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:23,457 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:23,578 | INFO     | [job] validate thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:24,522 | INFO     | [data] copytool_out thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:26,377 | INFO     | [monitor] cgroup control has ended
[2025-11-25 03:50:51] 2025-11-25 02:50:26,843 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:31,476 | INFO     | job.realtimelogging is not enabled
[2025-11-25 03:50:51] 2025-11-25 02:50:32,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 03:50:51] 2025-11-25 02:50:32,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287415469888)>', '<ExcThread(monitor, started 140287133320960)>']
[2025-11-25 03:50:51] 2025-11-25 02:50:37,945 | INFO     | all workflow threads have been joined
[2025-11-25 03:50:51] 2025-11-25 02:50:37,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 03:50:51] 2025-11-25 02:50:37,946 | INFO     | traces error code: 0
[2025-11-25 03:50:51] 2025-11-25 02:50:37,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 03:50:51] 2025-11-25 02:50:51,406 | INFO     | PID=1397158 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 03:50:51] 2025-11-25 02:50:51,407 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 03:50:51] 2025-11-25 02:50:51,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 03:50:51] 2025-11-25 02:50:51,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 03:50:51] 2025-11-25 02:50:51,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 03:50:51] 2025-11-25 02:50:51,407 | INFO     | [monitor] control thread has ended
[2025-11-25 03:50:51] 2025-11-25 02:50:51,453 [wrapper] ==== pilot stdout END ====
[2025-11-25 03:50:51] 2025-11-25 02:50:51,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 03:50:51] 2025-11-25 02:50:51,457 [wrapper] pilotpid: 1397158
[2025-11-25 03:50:51] 2025-11-25 02:50:51,460 [wrapper] Pilot exit status: 0
[2025-11-25 03:50:51] 2025-11-25 02:50:51,466 [wrapper] pandaids: 6894268500
[2025-11-25 03:50:51] 2025-11-25 02:50:51,482 [wrapper] cleanup supervisor_pilot 1454643 1397159
[2025-11-25 03:50:51] 2025-11-25 02:50:51,485 [wrapper] Test setup, not cleaning
[2025-11-25 03:50:51] 2025-11-25 02:50:51,487 [wrapper] apfmon messages muted
[2025-11-25 03:50:51] 2025-11-25 02:50:51,489 [wrapper] ==== wrapper stdout END ====
[2025-11-25 03:50:51] 2025-11-25 02:50:51,491 [wrapper] ==== wrapper stderr END ====
[2025-11-25 03:50:51]  *** Error codes and diagnostics ***
[2025-11-25 03:50:51]     "exeErrorCode": 0,
[2025-11-25 03:50:51]     "exeErrorDiag": "",
[2025-11-25 03:50:51]     "pilotErrorCode": 0,
[2025-11-25 03:50:51]     "pilotErrorDiag": "",
[2025-11-25 03:50:51]  *** Listing of results directory ***
[2025-11-25 03:50:51] total 1308080
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-25 03:50:51] -rwx------ 1 boinc boinc     36292 Nov 21 06:59 runpilot2-wrapper.sh
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:59 queuedata.json
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc       100 Nov 24 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 03:50:51] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 19:39 run_atlas
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc       105 Nov 24 19:39 job.xml
[2025-11-25 03:50:51] -rw-r--r-- 2 boinc boinc 411274814 Nov 24 19:39 EVNT.47493127._002269.pool.root.1
[2025-11-25 03:50:51] drwxrwx--x 2 boinc boinc      4096 Nov 24 19:39 shared
[2025-11-25 03:50:51] -rw-r--r-- 2 boinc boinc    590101 Nov 24 19:39 input.tar.gz
[2025-11-25 03:50:51] -rw-r--r-- 2 boinc boinc     15847 Nov 24 19:39 start_atlas.sh
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc         0 Nov 24 19:39 boinc_setup_complete
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc      6442 Nov 24 19:39 init_data.xml
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc         0 Nov 24 19:39 boinc_lockfile
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc      2786 Nov 24 19:39 pandaJob.out
[2025-11-25 03:50:51] -rw------- 1 boinc boinc    991801 Nov 24 19:39 agis_schedconf.cvmfs.json
[2025-11-25 03:50:51] drwx------ 5 boinc boinc      4096 Nov 24 19:39 pilot3
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc       531 Nov 25 03:46 boinc_task_state.xml
[2025-11-25 03:50:51] -rw------- 1 boinc boinc 913650776 Nov 25 03:49 HITS.47533967._002405.pool.root.1
[2025-11-25 03:50:51] -rw------- 1 boinc boinc      1023 Nov 25 03:50 memory_monitor_summary.json
[2025-11-25 03:50:51] -rw------- 1 boinc boinc        95 Nov 25 03:50 pilot_heartbeat.json
[2025-11-25 03:50:51] -rw------- 1 boinc boinc   1516227 Nov 25 03:50 agis_ddmendpoints.agis.ALL.json
[2025-11-25 03:50:51] -rw------- 1 boinc boinc   1175479 Nov 25 03:50 log.47533967._002405.job.log.tgz.1
[2025-11-25 03:50:51] -rw------- 1 boinc boinc      8570 Nov 25 03:50 heartbeat.json
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc        28 Nov 25 03:50 wrapper_checkpoint.txt
[2025-11-25 03:50:51] -rw------- 1 boinc boinc       747 Nov 25 03:50 pilotlog.txt
[2025-11-25 03:50:51] -rw------- 1 boinc boinc   4142912 Nov 25 03:50 log.47533967._002405.job.log.1
[2025-11-25 03:50:51] -rw------- 1 boinc boinc       353 Nov 25 03:50 output.list
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc      8192 Nov 25 03:50 boinc_mmap_file
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc       620 Nov 25 03:50 runtime_log
[2025-11-25 03:50:51] -rw------- 1 boinc boinc   5335040 Nov 25 03:50 result.tar.gz
[2025-11-25 03:50:51] -rw------- 1 boinc boinc       669 Nov 25 03:50 KlWNDmIMZg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmROHKDmBGSPXm.diag
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc      8918 Nov 25 03:50 runtime_log.err
[2025-11-25 03:50:51] -rw-r--r-- 1 boinc boinc     21244 Nov 25 03:50 stderr.txt
[2025-11-25 03:50:51] HITS file was successfully produced:
[2025-11-25 03:50:51] -rw------- 1 boinc boinc 913650776 Nov 25 03:49 shared/HITS.pool.root.1
[2025-11-25 03:50:51]  *** Contents of shared directory: ***
[2025-11-25 03:50:51] total 1299692
[2025-11-25 03:50:51] -rw-r--r-- 2 boinc boinc 411274814 Nov 24 19:39 ATLAS.root_0
[2025-11-25 03:50:51] -rw-r--r-- 2 boinc boinc    590101 Nov 24 19:39 input.tar.gz
[2025-11-25 03:50:51] -rw-r--r-- 2 boinc boinc     15847 Nov 24 19:39 start_atlas.sh
[2025-11-25 03:50:51] -rw------- 1 boinc boinc 913650776 Nov 25 03:49 HITS.pool.root.1
[2025-11-25 03:50:51] -rw------- 1 boinc boinc   5335040 Nov 25 03:50 result.tar.gz
03:51:13 (1393429): run_atlas exited; CPU time 86941.702236
03:51:13 (1393429): called boinc_finish(0)

</stderr_txt>
]]>

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