Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:50:10 (2573969): wrapper (7.7.26015): starting
17:50:10 (2573969): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 17:50:10] Arguments: --nthreads 8
[2025-11-21 17:50:10] Threads: 8
[2025-11-21 17:50:10] Checking for CVMFS
[2025-11-21 17:50:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 17:50:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 17:50:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 17:50:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 17:50:12] 2.13.3.0 16090 23423 360296 153148 2 301 32808619 32935936 43701 16776704 0 331178714 99.637 286858967 54169 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 17:50:12] CVMFS is ok
[2025-11-21 17:50:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 17:50:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 17:50:12] Further information can be found at the LHC@home message board.
[2025-11-21 17:50:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 17:50:12] Checking for apptainer binary...
[2025-11-21 17:50:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 17:50:12] Running /usr/bin/apptainer --version
[2025-11-21 17:50:12] apptainer version 1.4.4-1.el9
[2025-11-21 17:50:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 17:50:13] c7-9-15.aglt2.org
[2025-11-21 17:50:13] apptainer works
[2025-11-21 17:50:13] Set ATHENA_PROC_NUMBER=8
[2025-11-21 17:50:13] Set ATHENA_CORE_NUMBER=8
[2025-11-21 17:50:13] Starting ATLAS job with PandaID=6893857505
[2025-11-21 17:50:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 04:07:04]  *** The last 200 lines of the pilot log: ***
[2025-11-22 04:07:04] 2025-11-22 09:06:15,705 | INFO     | time since job start (36807s) is within the limit (172800.0s)
[2025-11-22 04:07:04] 2025-11-22 09:06:17,723 | INFO     | time since job start (36809s) is within the limit (172800.0s)
[2025-11-22 04:07:04] 2025-11-22 09:06:17,933 | INFO     | monitor loop #2212: job 0:6893857505 is in state 'finished'
[2025-11-22 04:07:04] 2025-11-22 09:06:17,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:07:04] 2025-11-22 09:06:19,730 | INFO     | time since job start (36811s) is within the limit (172800.0s)
[2025-11-22 04:07:04] 2025-11-22 09:06:20,438 | INFO     | monitor loop #2213: job 0:6893857505 is in state 'finished'
[2025-11-22 04:07:04] 2025-11-22 09:06:20,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:07:04] 2025-11-22 09:06:21,736 | INFO     | time since job start (36813s) is within the limit (172800.0s)
[2025-11-22 04:07:04] 2025-11-22 09:06:22,949 | INFO     | monitor loop #2214: job 0:6893857505 is in state 'finished'
[2025-11-22 04:07:04] 2025-11-22 09:06:22,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:07:04] 2025-11-22 09:06:23,743 | INFO     | time since job start (36815s) is within the limit (172800.0s)
[2025-11-22 04:07:04] 2025-11-22 09:06:25,459 | INFO     | monitor loop #2215: job 0:6893857505 is in state 'finished'
[2025-11-22 04:07:04] 2025-11-22 09:06:25,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:07:04] 2025-11-22 09:06:25,750 | INFO     | time since job start (36817s) is within the limit (172800.0s)
[2025-11-22 04:07:04] 2025-11-22 09:06:27,771 | INFO     | time since job start (36819s) is within the limit (172800.0s)
[2025-11-22 04:07:04] 2025-11-22 09:06:27,969 | INFO     | monitor loop #2216: job 0:6893857505 is in state 'finished'
[2025-11-22 04:07:04] 2025-11-22 09:06:27,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 04:07:04] 2025-11-22 09:06:28,562 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 04:07:04] 2025-11-22 09:06:28,575 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3791.30415625
[2025-11-22 04:07:04] 2025-11-22 09:06:28,602 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6893857505/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 04:07:04] 2025-11-22 09:06:28,603 | INFO     | extracted standard info from prmon json
[2025-11-22 04:07:04] 2025-11-22 09:06:28,603 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 04:07:04] 2025-11-22 09:06:28,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 04:07:04] 2025-11-22 09:06:28,612 | INFO     | fitting pss+swap vs Time
[2025-11-22 04:07:04] 2025-11-22 09:06:28,613 | INFO     | sum of square deviations: 66312205648.45478
[2025-11-22 04:07:04] 2025-11-22 09:06:28,624 | INFO     | sum of deviations: 1257018678839.4785
[2025-11-22 04:07:04] 2025-11-22 09:06:28,624 | INFO     | mean x: 1763784103.458194
[2025-11-22 04:07:04] 2025-11-22 09:06:28,624 | INFO     | mean y: 2778586.2391304346
[2025-11-22 04:07:04] 2025-11-22 09:06:28,625 | INFO     | intersect: -33431632798.609093
[2025-11-22 04:07:04] 2025-11-22 09:06:28,625 | INFO     | chi2: 33.377059636193486
[2025-11-22 04:07:04] 2025-11-22 09:06:28,625 | INFO     | sum of square deviations: 64662944831.32549
[2025-11-22 04:07:04] 2025-11-22 09:06:28,634 | INFO     | sum of deviations: 1451613971752.8809
[2025-11-22 04:07:04] 2025-11-22 09:06:28,634 | INFO     | mean x: 1763783950.966273
[2025-11-22 04:07:04] 2025-11-22 09:06:28,634 | INFO     | mean y: 2796576.494097808
[2025-11-22 04:07:04] 2025-11-22 09:06:28,634 | INFO     | intersect: -39592267227.89678
[2025-11-22 04:07:04] 2025-11-22 09:06:28,634 | INFO     | chi2: 30.097313627460665
[2025-11-22 04:07:04] 2025-11-22 09:06:28,634 | INFO     | current chi2=30.097313627460665 (change=9.826347930230272 %)
[2025-11-22 04:07:04] 2025-11-22 09:06:28,634 | INFO     | right removable region: 592
[2025-11-22 04:07:04] 2025-11-22 09:06:28,635 | INFO     | sum of square deviations: 64662595301.32546
[2025-11-22 04:07:04] 2025-11-22 09:06:28,643 | INFO     | sum of deviations: 1005979689473.4398
[2025-11-22 04:07:04] 2025-11-22 09:06:28,643 | INFO     | mean x: 1763784255.966273
[2025-11-22 04:07:04] 2025-11-22 09:06:28,643 | INFO     | mean y: 2801794.3220910626
[2025-11-22 04:07:04] 2025-11-22 09:06:28,643 | INFO     | intersect: -27437036180.73554
[2025-11-22 04:07:04] 2025-11-22 09:06:28,643 | INFO     | chi2: 27.782274541216722
[2025-11-22 04:07:04] 2025-11-22 09:06:28,643 | INFO     | current chi2=27.782274541216722 (change=16.762366595378218 %)
[2025-11-22 04:07:04] 2025-11-22 09:06:28,643 | INFO     | left removable region: 10
[2025-11-22 04:07:04] 2025-11-22 09:06:28,644 | INFO     | sum of square deviations: 61130632857.36046
[2025-11-22 04:07:04] 2025-11-22 09:06:28,656 | INFO     | sum of deviations: 1010048213362.0115
[2025-11-22 04:07:04] 2025-11-22 09:06:28,656 | INFO     | mean x: 1763784225.4845362
[2025-11-22 04:07:04] 2025-11-22 09:06:28,656 | INFO     | mean y: 2846527.556701031
[2025-11-22 04:07:04] 2025-11-22 09:06:28,656 | INFO     | intersect: -29139778412.440983
[2025-11-22 04:07:04] 2025-11-22 09:06:28,657 | INFO     | chi2: 18.996531604782696
[2025-11-22 04:07:04] 2025-11-22 09:06:28,657 | INFO     | current memory leak: 16.52 B/s (using 582 data points, chi2=19.00)
[2025-11-22 04:07:04] 2025-11-22 09:06:28,657 | INFO     | could have reported an average CPU frequency of 3796 MHz (23 samples)
[2025-11-22 04:07:04] 2025-11-22 09:06:28,657 | INFO     | ..............................
[2025-11-22 04:07:04] 2025-11-22 09:06:28,657 | INFO     | . Timing measurements:
[2025-11-22 04:07:04] 2025-11-22 09:06:28,657 | INFO     | . get job = 0 s
[2025-11-22 04:07:04] 2025-11-22 09:06:28,657 | INFO     | . initial setup = 11 s
[2025-11-22 04:07:04] 2025-11-22 09:06:28,657 | INFO     | . payload setup = 120 s
[2025-11-22 04:07:04] 2025-11-22 09:06:28,658 | INFO     | . stage-in = 0 s
[2025-11-22 04:07:04] 2025-11-22 09:06:28,658 | INFO     | . payload execution = 36500 s
[2025-11-22 04:07:04] 2025-11-22 09:06:28,658 | INFO     | . stage-out = 5 s
[2025-11-22 04:07:04] 2025-11-22 09:06:28,658 | INFO     | . log creation = 1 s
[2025-11-22 04:07:04] 2025-11-22 09:06:28,658 | INFO     | ..............................
[2025-11-22 04:07:04] 2025-11-22 09:06:28,871 | INFO     | 
[2025-11-22 04:07:04] 2025-11-22 09:06:28,871 | INFO     | job summary report
[2025-11-22 04:07:04] 2025-11-22 09:06:28,871 | INFO     | --------------------------------------------------
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | PanDA job id: 6893857505
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | task id: 47523449
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | errors: (none)
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | pilot state: finished 
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | transexitcode: 0
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | exeerrorcode: 0
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | exeerrordiag: 
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | exitcode: 0
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | exitmsg: OK
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | cpuconsumptiontime: 137142 s
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | nevents: 1000
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | neventsw: 0
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | pid: 2725943
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | pgrp: 2725943
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | corecount: 8
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | event service: False
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | sizes: {0: 2298636, 1: 2298664, 2: 2298835, 12: 2298863, 23: 2298891, 34: 2298919, 45: 2299075, 55: 2299103, 66: 2299131, 67: 2299421, 77: 2299449, 36625: 2341083,
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | --------------------------------------------------
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | 
[2025-11-22 04:07:04] 2025-11-22 09:06:28,872 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,015 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 04:07:04] 2025-11-22 09:06:29,016 | INFO     | job 6893857505 has completed (purged errors)
[2025-11-22 04:07:04] 2025-11-22 09:06:29,016 | INFO     | overall cleanup function is called
[2025-11-22 04:07:04] 2025-11-22 09:06:30,078 | INFO     | --- collectZombieJob: --- 10, [2725943]
[2025-11-22 04:07:04] 2025-11-22 09:06:30,078 | INFO     | zombie collector waiting for pid 2725943
[2025-11-22 04:07:04] 2025-11-22 09:06:30,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 04:07:04] 2025-11-22 09:06:30,079 | INFO     | collected zombie processes
[2025-11-22 04:07:04] 2025-11-22 09:06:30,079 | INFO     | will attempt to kill all subprocesses of pid=2725943
[2025-11-22 04:07:04] 2025-11-22 09:06:30,965 | INFO     | process IDs to be killed: [2725943] (in reverse order)
[2025-11-22 04:07:04] 2025-11-22 09:06:31,354 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 04:07:04] 2025-11-22 09:06:31,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 04:07:04] 2025-11-22 09:06:31,415 | INFO     | did not find any defunct processes belonging to 2725943
[2025-11-22 04:07:04] 2025-11-22 09:06:31,479 | INFO     | did not find any defunct processes belonging to 2725943
[2025-11-22 04:07:04] 2025-11-22 09:06:31,480 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 04:07:04] 2025-11-22 09:06:31,480 | INFO     | ready for new job
[2025-11-22 04:07:04] 2025-11-22 09:06:31,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 04:07:04] 2025-11-22 09:06:31,483 | INFO     | ***************************************
[2025-11-22 04:07:04] 2025-11-22 09:06:31,483 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 04:07:04] 2025-11-22 09:06:31,483 | INFO     | ***************************************
[2025-11-22 04:07:04] 2025-11-22 09:06:31,483 | INFO     | 
[2025-11-22 04:07:04] 2025-11-22 09:06:31,494 | INFO     | architecture information:
[2025-11-22 04:07:04] 2025-11-22 09:06:31,497 | INFO     | executing command: cat /etc/os-release
[2025-11-22 04:07:04] 2025-11-22 09:06:31,564 | INFO     | cat /etc/os-release:
[2025-11-22 04:07:04] NAME="CentOS Linux"
[2025-11-22 04:07:04] VERSION="7 (Core)"
[2025-11-22 04:07:04] ID="centos"
[2025-11-22 04:07:04] ID_LIKE="rhel fedora"
[2025-11-22 04:07:04] VERSION_ID="7"
[2025-11-22 04:07:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 04:07:04] ANSI_COLOR="0;31"
[2025-11-22 04:07:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 04:07:04] HOME_URL="https://www.centos.org/"
[2025-11-22 04:07:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 04:07:04] 
[2025-11-22 04:07:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 04:07:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 04:07:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 04:07:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 04:07:04] 
[2025-11-22 04:07:04] 2025-11-22 09:06:31,564 | INFO     | ***************************************
[2025-11-22 04:07:04] 2025-11-22 09:06:32,067 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-22 04:07:04] 2025-11-22 09:06:32,102 | INFO     | sufficient remaining disk space (61976084480 B)
[2025-11-22 04:07:04] 2025-11-22 09:06:32,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 04:07:04] 2025-11-22 09:06:32,102 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 04:07:04] 2025-11-22 09:06:32,102 | INFO     | update_server=False
[2025-11-22 04:07:04] 2025-11-22 09:06:32,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 04:07:04] 2025-11-22 09:06:32,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 04:07:04] 2025-11-22 09:06:32,108 | INFO     | aborting loop
[2025-11-22 04:07:04] 2025-11-22 09:06:32,545 | INFO     | all job control threads have been joined
[2025-11-22 04:07:04] 2025-11-22 09:06:32,668 | INFO     | all data control threads have been joined
[2025-11-22 04:07:04] 2025-11-22 09:06:32,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 04:07:04] 2025-11-22 09:06:32,732 | INFO     | all payload control threads have been joined
[2025-11-22 04:07:04] 2025-11-22 09:06:33,114 | INFO     | [job] job monitor thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:33,115 | INFO     | [job] retrieve thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:33,415 | INFO     | [payload] failed_post thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:33,516 | INFO     | [data] copytool_in thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:33,551 | INFO     | [job] control thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:33,577 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:33,677 | INFO     | [data] control thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:33,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 04:07:04] 2025-11-22 09:06:33,741 | INFO     | [payload] control thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:33,753 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 04:07:04] 2025-11-22 09:06:33,855 | INFO     | [job] validate thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:33,856 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:34,112 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:34,302 | INFO     | [payload] validate_post thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:34,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:34,683 | INFO     | [data] copytool_out thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:34,759 | INFO     | [job] queue monitor thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:37,693 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 04:07:04] 2025-11-22 09:06:52,114 | INFO     | [monitor] cgroup control has ended
[2025-11-22 04:07:04] 2025-11-22 09:06:52,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916628858688)>', '<ExcThread(monitor, started 139915983570688)>']
[2025-11-22 04:07:04] 2025-11-22 09:06:57,703 | INFO     | all workflow threads have been joined
[2025-11-22 04:07:04] 2025-11-22 09:06:57,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 04:07:04] 2025-11-22 09:06:57,704 | INFO     | traces error code: 0
[2025-11-22 04:07:04] 2025-11-22 09:06:57,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 04:07:04] 2025-11-22 09:07:03,029 | INFO     | PID=2617517 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 04:07:04] 2025-11-22 09:07:03,029 | INFO     | .. there are 72 such processes running
[2025-11-22 04:07:04] 2025-11-22 09:07:03,030 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 04:07:04] 2025-11-22 09:07:03,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 04:07:04] 2025-11-22 09:07:03,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 04:07:04] 2025-11-22 09:07:03,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 04:07:04] 2025-11-22 09:07:03,030 | INFO     | [monitor] control thread has ended
[2025-11-22 04:07:04] 2025-11-22 09:07:03,164 [wrapper] ==== pilot stdout END ====
[2025-11-22 04:07:04] 2025-11-22 09:07:03,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 04:07:04] 2025-11-22 09:07:03,208 [wrapper] pilotpid: 2617517
[2025-11-22 04:07:04] 2025-11-22 09:07:03,244 [wrapper] Pilot exit status: 0
[2025-11-22 04:07:04] 2025-11-22 09:07:03,315 [wrapper] pandaids: 6893857505
[2025-11-22 04:07:04] 2025-11-22 09:07:03,561 [wrapper] cleanup supervisor_pilot 1750839 2617518
[2025-11-22 04:07:04] 2025-11-22 09:07:03,604 [wrapper] Test setup, not cleaning
[2025-11-22 04:07:04] 2025-11-22 09:07:03,624 [wrapper] apfmon messages muted
[2025-11-22 04:07:04] 2025-11-22 09:07:03,671 [wrapper] ==== wrapper stdout END ====
[2025-11-22 04:07:04] 2025-11-22 09:07:03,701 [wrapper] ==== wrapper stderr END ====
[2025-11-22 04:07:04]  *** Error codes and diagnostics ***
[2025-11-22 04:07:04]     "exeErrorCode": 0,
[2025-11-22 04:07:04]     "exeErrorDiag": "",
[2025-11-22 04:07:04]     "pilotErrorCode": 0,
[2025-11-22 04:07:04]     "pilotErrorDiag": "",
[2025-11-22 04:07:04]  *** Listing of results directory ***
[2025-11-22 04:07:04] total 1298764
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 08:01 pilot3.tar.gz
[2025-11-22 04:07:04] -rwx------. 1 boincer umatlas     36292 Nov 20 08:05 runpilot2-wrapper.sh
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 08:05 queuedata.json
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas       100 Nov 21 17:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 04:07:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 17:50 run_atlas
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas       105 Nov 21 17:50 job.xml
[2025-11-22 04:07:04] -rw-r--r--. 2 boincer umatlas 408211590 Nov 21 17:50 EVNT.47493127._000489.pool.root.1
[2025-11-22 04:07:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 17:50 start_atlas.sh
[2025-11-22 04:07:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 17:50 shared
[2025-11-22 04:07:04] -rw-r--r--. 2 boincer umatlas    590096 Nov 21 17:50 input.tar.gz
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas         0 Nov 21 17:50 boinc_lockfile
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 17:50 pandaJob.out
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas        57 Nov 21 17:50 setup.sh.local
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas    989798 Nov 21 17:52 agis_schedconf.cvmfs.json
[2025-11-22 04:07:04] drwx------. 5 boincer umatlas      4096 Nov 21 17:52 pilot3
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas       532 Nov 22 03:47 boinc_task_state.xml
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas      7172 Nov 22 04:01 init_data.xml
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas 904893799 Nov 22 04:04 HITS.47523449._004888.pool.root.1
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas      1054 Nov 22 04:05 memory_monitor_summary.json
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas   1526164 Nov 22 04:05 agis_ddmendpoints.agis.ALL.json
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas   1823256 Nov 22 04:05 log.47523449._004888.job.log.tgz.1
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas      8600 Nov 22 04:06 heartbeat.json
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas        95 Nov 22 04:07 pilot_heartbeat.json
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas       823 Nov 22 04:07 pilotlog.txt
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas   4625818 Nov 22 04:07 log.47523449._004888.job.log.1
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 04:07 boinc_mmap_file
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas       353 Nov 22 04:07 output.list
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas       620 Nov 22 04:07 runtime_log
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas   6471680 Nov 22 04:07 result.tar.gz
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas      9338 Nov 22 04:07 runtime_log.err
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas       659 Nov 22 04:07 0RuKDmPXJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLgGKDm0ebKIn.diag
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas        29 Nov 22 04:07 wrapper_checkpoint.txt
[2025-11-22 04:07:04] -rw-r--r--. 1 boincer umatlas     21817 Nov 22 04:07 stderr.txt
[2025-11-22 04:07:04] HITS file was successfully produced:
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas 904893799 Nov 22 04:04 shared/HITS.pool.root.1
[2025-11-22 04:07:04]  *** Contents of shared directory: ***
[2025-11-22 04:07:04] total 1289260
[2025-11-22 04:07:04] -rw-r--r--. 2 boincer umatlas 408211590 Nov 21 17:50 ATLAS.root_0
[2025-11-22 04:07:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 17:50 start_atlas.sh
[2025-11-22 04:07:04] -rw-r--r--. 2 boincer umatlas    590096 Nov 21 17:50 input.tar.gz
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas 904893799 Nov 22 04:04 HITS.pool.root.1
[2025-11-22 04:07:04] -rw-------. 1 boincer umatlas   6471680 Nov 22 04:07 result.tar.gz
04:07:06 (2573969): run_atlas exited; CPU time 137871.790008
04:07:06 (2573969): called boinc_finish(0)

</stderr_txt>
]]>

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