Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:01:21 (3205940): wrapper (7.7.26015): starting
07:01:21 (3205940): wrapper: running run_atlas (--nthreads 3)
[2025-11-22 07:01:21] Arguments: --nthreads 3
[2025-11-22 07:01:21] Threads: 3
[2025-11-22 07:01:21] Checking for CVMFS
[2025-11-22 07:01:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 07:01:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 07:01:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 07:01:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 07:01:21] 2.9.2.0 2886065 2375 69044 153161 0 81 6304065 36864000 0 130560 0 881517 99.974 67985 2623 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-22 07:01:21] CVMFS is ok
[2025-11-22 07:01:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 07:01:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 07:01:21] Further information can be found at the LHC@home message board.
[2025-11-22 07:01:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 07:01:21] Checking for apptainer binary...
[2025-11-22 07:01:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 07:01:21] Running /usr/bin/apptainer --version
[2025-11-22 07:01:21] apptainer version 1.4.1-1.1
[2025-11-22 07:01:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 07:01:21] thA330a
[2025-11-22 07:01:21] apptainer works
[2025-11-22 07:01:21] Set ATHENA_PROC_NUMBER=3
[2025-11-22 07:01:21] Set ATHENA_CORE_NUMBER=3
[2025-11-22 07:01:21] Starting ATLAS job with PandaID=6894267864
[2025-11-22 07:01:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 15:01:16]  *** The last 200 lines of the pilot log: ***
[2025-11-22 15:01:16] 2025-11-22 14:00:16,288 | INFO     | cat /etc/os-release:
[2025-11-22 15:01:16] NAME="CentOS Linux"
[2025-11-22 15:01:16] VERSION="7 (Core)"
[2025-11-22 15:01:16] ID="centos"
[2025-11-22 15:01:16] ID_LIKE="rhel fedora"
[2025-11-22 15:01:16] VERSION_ID="7"
[2025-11-22 15:01:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 15:01:16] ANSI_COLOR="0;31"
[2025-11-22 15:01:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 15:01:16] HOME_URL="https://www.centos.org/"
[2025-11-22 15:01:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 15:01:16] 
[2025-11-22 15:01:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 15:01:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 15:01:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 15:01:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 15:01:16] 
[2025-11-22 15:01:16] 2025-11-22 14:00:16,288 | INFO     | ***************************************
[2025-11-22 15:01:16] 2025-11-22 14:00:16,790 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-22 15:01:16] 2025-11-22 14:00:16,801 | INFO     | sufficient remaining disk space (254376148992 B)
[2025-11-22 15:01:16] 2025-11-22 14:00:16,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 15:01:16] 2025-11-22 14:00:16,802 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 15:01:16] 2025-11-22 14:00:16,802 | INFO     | update_server=False
[2025-11-22 15:01:16] 2025-11-22 14:00:16,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 15:01:16] 2025-11-22 14:00:16,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 15:01:16] 2025-11-22 14:00:16,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 15:01:16] 2025-11-22 14:00:16,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 15:01:16] 2025-11-22 14:00:17,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 15:01:16] 2025-11-22 14:00:17,410 | INFO     | aborting loop
[2025-11-22 15:01:16] 2025-11-22 14:00:17,776 | INFO     | all job control threads have been joined
[2025-11-22 15:01:16] 2025-11-22 14:00:17,807 | INFO     | [job] retrieve thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:17,807 | INFO     | [job] queue monitor thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:17,856 | INFO     | all data control threads have been joined
[2025-11-22 15:01:16] 2025-11-22 14:00:17,870 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:17,881 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:18,158 | INFO     | [job] validate thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:18,241 | INFO     | [payload] validate_post thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:18,309 | INFO     | all payload control threads have been joined
[2025-11-22 15:01:16] 2025-11-22 14:00:18,415 | INFO     | [job] job monitor thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:18,756 | INFO     | [data] copytool_in thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:18,782 | INFO     | [job] control thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:18,808 | INFO     | [data] copytool_out thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:18,862 | INFO     | [data] control thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:19,213 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:19,315 | INFO     | [payload] control thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:19,389 | INFO     | [payload] failed_post thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:20,957 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:27,082 | INFO     | job.realtimelogging is not enabled
[2025-11-22 15:01:16] 2025-11-22 14:00:28,088 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 15:01:16] 2025-11-22 14:00:47,058 | INFO     | PID=3209661 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 15:01:16] 2025-11-22 14:00:47,058 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 15:01:16] 2025-11-22 14:00:47,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 15:01:16] 2025-11-22 14:00:47,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 15:01:16] 2025-11-22 14:01:10,333 | INFO     | [monitor] cgroup control has ended
[2025-11-22 15:01:16] 2025-11-22 14:01:11,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993301178176)>', '<ExcThread(monitor, started 139992949044992)>']
[2025-11-22 15:01:16] 2025-11-22 14:01:12,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 15:01:16] 2025-11-22 14:01:12,164 | INFO     | [monitor] control thread has ended
[2025-11-22 15:01:16] 2025-11-22 14:01:16,346 | INFO     | all workflow threads have been joined
[2025-11-22 15:01:16] 2025-11-22 14:01:16,346 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 15:01:16] 2025-11-22 14:01:16,346 | INFO     | traces error code: 0
[2025-11-22 15:01:16] 2025-11-22 14:01:16,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 15:01:16] 2025-11-22 14:01:16,397 [wrapper] ==== pilot stdout END ====
[2025-11-22 15:01:16] 2025-11-22 14:01:16,400 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 15:01:16] 2025-11-22 14:01:16,403 [wrapper] pilotpid: 3209661
[2025-11-22 15:01:16] 2025-11-22 14:01:16,405 [wrapper] Pilot exit status: 0
[2025-11-22 15:01:16] 2025-11-22 14:01:16,412 [wrapper] pandaids: 6894267864
[2025-11-22 15:01:16] 2025-11-22 14:01:16,431 [wrapper] cleanup supervisor_pilot 3268165 3209662
[2025-11-22 15:01:16] 2025-11-22 14:01:16,433 [wrapper] Test setup, not cleaning
[2025-11-22 15:01:16] 2025-11-22 14:01:16,435 [wrapper] apfmon messages muted
[2025-11-22 15:01:16] 2025-11-22 14:01:16,437 [wrapper] ==== wrapper stdout END ====
[2025-11-22 15:01:16] 2025-11-22 14:01:16,440 [wrapper] ==== wrapper stderr END ====
[2025-11-22 15:01:16]  *** Error codes and diagnostics ***
[2025-11-22 15:01:16]     "exeErrorCode": 0,
[2025-11-22 15:01:16]     "exeErrorDiag": "",
[2025-11-22 15:01:16]     "pilotErrorCode": 0,
[2025-11-22 15:01:16]     "pilotErrorDiag": "",
[2025-11-22 15:01:16]  *** Listing of results directory ***
[2025-11-22 15:01:16] total 1327612
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:39 queuedata.json
[2025-11-22 15:01:16] -rwx------ 1 boinc boinc     36292 Nov 21 06:40 runpilot2-wrapper.sh
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc       100 Nov 22 07:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 15:01:16] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 07:01 run_atlas
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc       105 Nov 22 07:01 job.xml
[2025-11-22 15:01:16] -rw-r--r-- 2 boinc boinc 410168742 Nov 22 07:01 EVNT.47493127._002258.pool.root.1
[2025-11-22 15:01:16] drwxrwx--x 2 boinc boinc      4096 Nov 22 07:01 shared
[2025-11-22 15:01:16] -rw-r--r-- 2 boinc boinc    590102 Nov 22 07:01 input.tar.gz
[2025-11-22 15:01:16] -rw-r--r-- 2 boinc boinc     15847 Nov 22 07:01 start_atlas.sh
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc         0 Nov 22 07:01 boinc_setup_complete
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc      6439 Nov 22 07:01 init_data.xml
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc         0 Nov 22 07:01 boinc_lockfile
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc      2786 Nov 22 07:01 pandaJob.out
[2025-11-22 15:01:16] -rw------- 1 boinc boinc    989752 Nov 22 07:01 agis_schedconf.cvmfs.json
[2025-11-22 15:01:16] drwx------ 5 boinc boinc      4096 Nov 22 07:01 pilot3
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc       531 Nov 22 14:57 boinc_task_state.xml
[2025-11-22 15:01:16] -rw------- 1 boinc boinc 934971064 Nov 22 14:59 HITS.47533967._002295.pool.root.1
[2025-11-22 15:01:16] -rw------- 1 boinc boinc        95 Nov 22 14:59 pilot_heartbeat.json
[2025-11-22 15:01:16] -rw------- 1 boinc boinc      1027 Nov 22 15:00 memory_monitor_summary.json
[2025-11-22 15:01:16] -rw------- 1 boinc boinc   1526164 Nov 22 15:00 agis_ddmendpoints.agis.ALL.json
[2025-11-22 15:01:16] -rw------- 1 boinc boinc   1169267 Nov 22 15:00 log.47533967._002295.job.log.tgz.1
[2025-11-22 15:01:16] -rw------- 1 boinc boinc      8567 Nov 22 15:00 heartbeat.json
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc        28 Nov 22 15:00 wrapper_checkpoint.txt
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc      8192 Nov 22 15:00 boinc_mmap_file
[2025-11-22 15:01:16] -rw------- 1 boinc boinc      4824 Nov 22 15:01 pilotlog.txt
[2025-11-22 15:01:16] -rw------- 1 boinc boinc   4040567 Nov 22 15:01 log.47533967._002295.job.log.1
[2025-11-22 15:01:16] -rw------- 1 boinc boinc       353 Nov 22 15:01 output.list
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc       620 Nov 22 15:01 runtime_log
[2025-11-22 15:01:16] -rw------- 1 boinc boinc   5232640 Nov 22 15:01 result.tar.gz
[2025-11-22 15:01:16] -rw------- 1 boinc boinc       666 Nov 22 15:01 tV2LDmG4Yg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmz7IKDmjW4cCo.diag
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc      8903 Nov 22 15:01 runtime_log.err
[2025-11-22 15:01:16] -rw-r--r-- 1 boinc boinc      8879 Nov 22 15:01 stderr.txt
[2025-11-22 15:01:16] HITS file was successfully produced:
[2025-11-22 15:01:16] -rw------- 1 boinc boinc 934971064 Nov 22 14:59 shared/HITS.pool.root.1
[2025-11-22 15:01:16]  *** Contents of shared directory: ***
[2025-11-22 15:01:16] total 1319332
[2025-11-22 15:01:16] -rw-r--r-- 2 boinc boinc 410168742 Nov 22 07:01 ATLAS.root_0
[2025-11-22 15:01:16] -rw-r--r-- 2 boinc boinc    590102 Nov 22 07:01 input.tar.gz
[2025-11-22 15:01:16] -rw-r--r-- 2 boinc boinc     15847 Nov 22 07:01 start_atlas.sh
[2025-11-22 15:01:16] -rw------- 1 boinc boinc 934971064 Nov 22 14:59 HITS.pool.root.1
[2025-11-22 15:01:16] -rw------- 1 boinc boinc   5232640 Nov 22 15:01 result.tar.gz
15:01:18 (3205940): run_atlas exited; CPU time 84885.097817
15:01:18 (3205940): called boinc_finish(0)

</stderr_txt>
]]>

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