Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:22:31 (3881236): wrapper (7.7.26015): starting
16:22:31 (3881236): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 16:22:31] Arguments: --nthreads 3
[2025-11-24 16:22:31] Threads: 3
[2025-11-24 16:22:31] Checking for CVMFS
[2025-11-24 16:22:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 16:22:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 16:22:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 16:22:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 16:22:32] 2.9.2.0 2771396 8393 85364 153250 0 81 18551924 36864000 0 130560 0 3094235 99.915 458149 4654 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 16:22:32] CVMFS is ok
[2025-11-24 16:22:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 16:22:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 16:22:32] Further information can be found at the LHC@home message board.
[2025-11-24 16:22:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:22:32] Checking for apptainer binary...
[2025-11-24 16:22:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 16:22:32] Running /usr/bin/apptainer --version
[2025-11-24 16:22:32] apptainer version 1.4.1-1.1
[2025-11-24 16:22:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:22:32] atlasA217a
[2025-11-24 16:22:32] apptainer works
[2025-11-24 16:22:32] Set ATHENA_PROC_NUMBER=3
[2025-11-24 16:22:32] Set ATHENA_CORE_NUMBER=3
[2025-11-24 16:22:32] Starting ATLAS job with PandaID=6894268438
[2025-11-24 16:22:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:31:28]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:31:28] 2025-11-24 23:30:55,497 | INFO     | monitor loop #2232: job 0:6894268438 is in state 'finished'
[2025-11-25 00:31:28] 2025-11-24 23:30:55,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,541 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 00:31:28] 2025-11-24 23:30:56,542 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3671.115416666666
[2025-11-25 00:31:28] 2025-11-24 23:30:56,543 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894268438/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,543 | INFO     | extracted standard info from prmon json
[2025-11-25 00:31:28] 2025-11-24 23:30:56,543 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:31:28] 2025-11-24 23:30:56,543 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:31:28] 2025-11-24 23:30:56,546 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:31:28] 2025-11-24 23:30:56,546 | INFO     | sum of square deviations: 34292587160.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,548 | INFO     | sum of deviations: 242292888251.50006
[2025-11-25 00:31:28] 2025-11-24 23:30:56,548 | INFO     | mean x: 1764012386.5
[2025-11-25 00:31:28] 2025-11-24 23:30:56,548 | INFO     | mean y: 2220385.7645833334
[2025-11-25 00:31:28] 2025-11-24 23:30:56,548 | INFO     | intersect: -12461337818.296753
[2025-11-25 00:31:28] 2025-11-24 23:30:56,548 | INFO     | chi2: 3.248961549371608
[2025-11-25 00:31:28] 2025-11-24 23:30:56,548 | INFO     | sum of square deviations: 33232064950.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,550 | INFO     | sum of deviations: 282421125903.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,550 | INFO     | mean x: 1764012234.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,550 | INFO     | mean y: 2226118.3410526314
[2025-11-25 00:31:28] 2025-11-24 23:30:56,550 | INFO     | intersect: -14989148085.53448
[2025-11-25 00:31:28] 2025-11-24 23:30:56,551 | INFO     | chi2: 2.3707972212133437
[2025-11-25 00:31:28] 2025-11-24 23:30:56,551 | INFO     | current chi2=2.3707972212133437 (change=27.029077285574925 %)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,551 | INFO     | sum of square deviations: 32193636177.5
[2025-11-25 00:31:28] 2025-11-24 23:30:56,552 | INFO     | sum of deviations: 279054083892.99994
[2025-11-25 00:31:28] 2025-11-24 23:30:56,553 | INFO     | mean x: 1764012081.5
[2025-11-25 00:31:28] 2025-11-24 23:30:56,553 | INFO     | mean y: 2225623.8085106383
[2025-11-25 00:31:28] 2025-11-24 23:30:56,553 | INFO     | intersect: -15288211674.579092
[2025-11-25 00:31:28] 2025-11-24 23:30:56,553 | INFO     | chi2: 2.3677747961873536
[2025-11-25 00:31:28] 2025-11-24 23:30:56,553 | INFO     | current chi2=2.3677747961873536 (change=0.12748559847067814 %)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,553 | INFO     | right removable region: 469
[2025-11-25 00:31:28] 2025-11-24 23:30:56,553 | INFO     | sum of square deviations: 33232064950.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,555 | INFO     | sum of deviations: 141478439053.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,555 | INFO     | mean x: 1764012539.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,555 | INFO     | mean y: 2234861.1957894736
[2025-11-25 00:31:28] 2025-11-24 23:30:56,555 | INFO     | intersect: -7507672839.7892275
[2025-11-25 00:31:28] 2025-11-24 23:30:56,555 | INFO     | chi2: 1.1788784934526957
[2025-11-25 00:31:28] 2025-11-24 23:30:56,555 | INFO     | current chi2=1.1788784934526957 (change=63.7152217550649 %)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,555 | INFO     | sum of square deviations: 32193636177.5
[2025-11-25 00:31:28] 2025-11-24 23:30:56,557 | INFO     | sum of deviations: 114129137669.99997
[2025-11-25 00:31:28] 2025-11-24 23:30:56,557 | INFO     | mean x: 1764012691.5
[2025-11-25 00:31:28] 2025-11-24 23:30:56,557 | INFO     | mean y: 2238860.361702128
[2025-11-25 00:31:28] 2025-11-24 23:30:56,557 | INFO     | intersect: -6251333933.025833
[2025-11-25 00:31:28] 2025-11-24 23:30:56,557 | INFO     | chi2: 0.9474646302845018
[2025-11-25 00:31:28] 2025-11-24 23:30:56,557 | INFO     | current chi2=0.9474646302845018 (change=19.630001264204054 %)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,557 | INFO     | left removable region: 20
[2025-11-25 00:31:28] 2025-11-24 23:30:56,558 | INFO     | sum of square deviations: 28068247200.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,559 | INFO     | sum of deviations: 134272083700.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,559 | INFO     | mean x: 1764012661.0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,559 | INFO     | mean y: 2247454.0022271713
[2025-11-25 00:31:28] 2025-11-24 23:30:56,559 | INFO     | intersect: -8436386208.368102
[2025-11-25 00:31:28] 2025-11-24 23:30:56,559 | INFO     | chi2: 0.051425940437572655
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | current memory leak: 4.78 B/s (using 449 data points, chi2=0.05)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | could have reported an average CPU frequency of 3838 MHz (20 samples)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | ..............................
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | . Timing measurements:
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | . get job = 0 s
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | . initial setup = 1 s
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | . payload setup = 2 s
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | . stage-in = 0 s
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | . payload execution = 29270 s
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | . stage-out = 1 s
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | . log creation = 0 s
[2025-11-25 00:31:28] 2025-11-24 23:30:56,560 | INFO     | ..............................
[2025-11-25 00:31:28] 2025-11-24 23:30:56,590 | INFO     | 
[2025-11-25 00:31:28] 2025-11-24 23:30:56,590 | INFO     | job summary report
[2025-11-25 00:31:28] 2025-11-24 23:30:56,590 | INFO     | --------------------------------------------------
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | PanDA job id: 6894268438
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | task id: 47533967
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | errors: (none)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | pilot state: finished 
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | transexitcode: 0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | exeerrorcode: 0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | exeerrordiag: 
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | exitcode: 0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | exitmsg: OK
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | cpuconsumptiontime: 86575 s
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | nevents: 1000
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | neventsw: 0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | pid: 3891407
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | pgrp: 3891407
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | corecount: 3
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | event service: False
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | sizes: {0: 2284313, 2: 2284575, 11: 2284603, 29276: 2323708, 29278: 2332708, 29280: 2332764, 29286: 2333138}
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | --------------------------------------------------
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | 
[2025-11-25 00:31:28] 2025-11-24 23:30:56,591 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | job 6894268438 has completed (purged errors)
[2025-11-25 00:31:28] 2025-11-24 23:30:56,604 | INFO     | overall cleanup function is called
[2025-11-25 00:31:28] 2025-11-24 23:30:57,612 | INFO     | --- collectZombieJob: --- 10, [3891407]
[2025-11-25 00:31:28] 2025-11-24 23:30:57,612 | INFO     | zombie collector waiting for pid 3891407
[2025-11-25 00:31:28] 2025-11-24 23:30:57,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:31:28] 2025-11-24 23:30:57,612 | INFO     | collected zombie processes
[2025-11-25 00:31:28] 2025-11-24 23:30:57,612 | INFO     | will attempt to kill all subprocesses of pid=3891407
[2025-11-25 00:31:28] 2025-11-24 23:30:57,653 | INFO     | process IDs to be killed: [3891407] (in reverse order)
[2025-11-25 00:31:28] 2025-11-24 23:30:57,677 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:31:28] 2025-11-24 23:30:57,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:31:28] 2025-11-24 23:30:57,678 | INFO     | did not find any defunct processes belonging to 3891407
[2025-11-25 00:31:28] 2025-11-24 23:30:57,679 | INFO     | did not find any defunct processes belonging to 3891407
[2025-11-25 00:31:28] 2025-11-24 23:30:57,680 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:31:28] 2025-11-24 23:30:57,680 | INFO     | ready for new job
[2025-11-25 00:31:28] 2025-11-24 23:30:57,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:31:28] 2025-11-24 23:30:57,681 | INFO     | ***************************************
[2025-11-25 00:31:28] 2025-11-24 23:30:57,681 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:31:28] 2025-11-24 23:30:57,681 | INFO     | ***************************************
[2025-11-25 00:31:28] 2025-11-24 23:30:57,681 | INFO     | 
[2025-11-25 00:31:28] 2025-11-24 23:30:57,681 | INFO     | architecture information:
[2025-11-25 00:31:28] 2025-11-24 23:30:57,682 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:31:28] 2025-11-24 23:30:57,690 | INFO     | cat /etc/os-release:
[2025-11-25 00:31:28] NAME="CentOS Linux"
[2025-11-25 00:31:28] VERSION="7 (Core)"
[2025-11-25 00:31:28] ID="centos"
[2025-11-25 00:31:28] ID_LIKE="rhel fedora"
[2025-11-25 00:31:28] VERSION_ID="7"
[2025-11-25 00:31:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:31:28] ANSI_COLOR="0;31"
[2025-11-25 00:31:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:31:28] HOME_URL="https://www.centos.org/"
[2025-11-25 00:31:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:31:28] 
[2025-11-25 00:31:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:31:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:31:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:31:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:31:28] 
[2025-11-25 00:31:28] 2025-11-24 23:30:57,691 | INFO     | ***************************************
[2025-11-25 00:31:28] 2025-11-24 23:30:58,194 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 00:31:28] 2025-11-24 23:30:58,207 | INFO     | sufficient remaining disk space (339374768128 B)
[2025-11-25 00:31:28] 2025-11-24 23:30:58,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:31:28] 2025-11-24 23:30:58,207 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:31:28] 2025-11-24 23:30:58,207 | INFO     | update_server=False
[2025-11-25 00:31:28] 2025-11-24 23:30:58,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:31:28] 2025-11-24 23:30:58,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:31:28] 2025-11-24 23:30:58,807 | INFO     | all job control threads have been joined
[2025-11-25 00:31:28] 2025-11-24 23:30:59,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:31:28] 2025-11-24 23:30:59,006 | INFO     | aborting loop
[2025-11-25 00:31:28] 2025-11-24 23:30:59,057 | INFO     | all payload control threads have been joined
[2025-11-25 00:31:28] 2025-11-24 23:30:59,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:31:28] 2025-11-24 23:30:59,213 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:30:59,213 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:30:59,265 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:30:59,304 | INFO     | all data control threads have been joined
[2025-11-25 00:31:28] 2025-11-24 23:30:59,420 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:30:59,813 | INFO     | [job] control thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:30:59,832 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:00,012 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:00,031 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:00,058 | INFO     | [payload] control thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:00,310 | INFO     | [data] control thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:00,341 | INFO     | [job] validate thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:00,344 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:00,389 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:01,119 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:01,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:31:28] 2025-11-24 23:31:05,424 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:08,206 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:31:28] 2025-11-24 23:31:08,530 | INFO     | job.realtimelogging is not enabled
[2025-11-25 00:31:28] 2025-11-24 23:31:09,536 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:31:28] 2025-11-24 23:31:11,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108835288896)>', '<ExcThread(monitor, started 140108554536704)>']
[2025-11-25 00:31:28] 2025-11-24 23:31:16,289 | INFO     | all workflow threads have been joined
[2025-11-25 00:31:28] 2025-11-24 23:31:16,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:31:28] 2025-11-24 23:31:16,289 | INFO     | traces error code: 0
[2025-11-25 00:31:28] 2025-11-24 23:31:16,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:31:28] 2025-11-24 23:31:27,994 | INFO     | PID=3884960 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 00:31:28] 2025-11-24 23:31:27,995 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:31:28] 2025-11-24 23:31:27,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:31:28] 2025-11-24 23:31:27,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:31:28] 2025-11-24 23:31:27,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:31:28] 2025-11-24 23:31:27,995 | CRITICAL | thread 'MainThread' is not alive
[2025-11-25 00:31:28] 2025-11-24 23:31:27,995 | INFO     | [monitor] control thread has ended
[2025-11-25 00:31:28] 2025-11-24 23:31:28,042 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:31:28] 2025-11-24 23:31:28,045 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:31:28] 2025-11-24 23:31:28,047 [wrapper] pilotpid: 3884960
[2025-11-25 00:31:28] 2025-11-24 23:31:28,049 [wrapper] Pilot exit status: 0
[2025-11-25 00:31:28] 2025-11-24 23:31:28,056 [wrapper] pandaids: 6894268438
[2025-11-25 00:31:28] 2025-11-24 23:31:28,072 [wrapper] cleanup supervisor_pilot 3942134 3884961
[2025-11-25 00:31:28] 2025-11-24 23:31:28,074 [wrapper] Test setup, not cleaning
[2025-11-25 00:31:28] 2025-11-24 23:31:28,077 [wrapper] apfmon messages muted
[2025-11-25 00:31:28] 2025-11-24 23:31:28,079 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:31:28] 2025-11-24 23:31:28,081 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:31:28]  *** Error codes and diagnostics ***
[2025-11-25 00:31:28]     "exeErrorCode": 0,
[2025-11-25 00:31:28]     "exeErrorDiag": "",
[2025-11-25 00:31:28]     "pilotErrorCode": 0,
[2025-11-25 00:31:28]     "pilotErrorDiag": "",
[2025-11-25 00:31:28]  *** Listing of results directory ***
[2025-11-25 00:31:28] total 1295432
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-25 00:31:28] -rwx------ 1 boinc boinc     36292 Nov 21 06:48 runpilot2-wrapper.sh
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:48 queuedata.json
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc       100 Nov 24 16:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:31:28] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 16:22 run_atlas
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc       105 Nov 24 16:22 job.xml
[2025-11-25 00:31:28] -rw-r--r-- 2 boinc boinc 409869056 Nov 24 16:22 EVNT.47493127._002266.pool.root.1
[2025-11-25 00:31:28] -rw-r--r-- 2 boinc boinc    590100 Nov 24 16:22 input.tar.gz
[2025-11-25 00:31:28] -rw-r--r-- 2 boinc boinc     15847 Nov 24 16:22 start_atlas.sh
[2025-11-25 00:31:28] drwxrwx--x 2 boinc boinc      4096 Nov 24 16:22 shared
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc         0 Nov 24 16:22 boinc_setup_complete
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc      6444 Nov 24 16:22 init_data.xml
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc         0 Nov 24 16:22 boinc_lockfile
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc      2786 Nov 24 16:22 pandaJob.out
[2025-11-25 00:31:28] -rw------- 1 boinc boinc    987541 Nov 24 16:22 agis_schedconf.cvmfs.json
[2025-11-25 00:31:28] drwx------ 5 boinc boinc      4096 Nov 24 16:22 pilot3
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc       532 Nov 25 00:28 boinc_task_state.xml
[2025-11-25 00:31:28] -rw------- 1 boinc boinc 902136444 Nov 25 00:30 HITS.47533967._002372.pool.root.1
[2025-11-25 00:31:28] -rw------- 1 boinc boinc      1025 Nov 25 00:30 memory_monitor_summary.json
[2025-11-25 00:31:28] -rw------- 1 boinc boinc   1516227 Nov 25 00:30 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:31:28] -rw------- 1 boinc boinc   1174395 Nov 25 00:30 log.47533967._002372.job.log.tgz.1
[2025-11-25 00:31:28] -rw------- 1 boinc boinc      8576 Nov 25 00:30 heartbeat.json
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc      8192 Nov 25 00:31 boinc_mmap_file
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc        28 Nov 25 00:31 wrapper_checkpoint.txt
[2025-11-25 00:31:28] -rw------- 1 boinc boinc       817 Nov 25 00:31 pilotlog.txt
[2025-11-25 00:31:28] -rw------- 1 boinc boinc        95 Nov 25 00:31 pilot_heartbeat.json
[2025-11-25 00:31:28] -rw------- 1 boinc boinc   4126952 Nov 25 00:31 log.47533967._002372.job.log.1
[2025-11-25 00:31:28] -rw------- 1 boinc boinc       353 Nov 25 00:31 output.list
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc       620 Nov 25 00:31 runtime_log
[2025-11-25 00:31:28] -rw------- 1 boinc boinc   5324800 Nov 25 00:31 result.tar.gz
[2025-11-25 00:31:28] -rw------- 1 boinc boinc       669 Nov 25 00:31 x5cLDmLBZg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFOHKDmLSwVlm.diag
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc      8918 Nov 25 00:31 runtime_log.err
[2025-11-25 00:31:28] -rw-r--r-- 1 boinc boinc     21214 Nov 25 00:31 stderr.txt
[2025-11-25 00:31:28] HITS file was successfully produced:
[2025-11-25 00:31:28] -rw------- 1 boinc boinc 902136444 Nov 25 00:30 shared/HITS.pool.root.1
[2025-11-25 00:31:28]  *** Contents of shared directory: ***
[2025-11-25 00:31:28] total 1287064
[2025-11-25 00:31:28] -rw-r--r-- 2 boinc boinc 409869056 Nov 24 16:22 ATLAS.root_0
[2025-11-25 00:31:28] -rw-r--r-- 2 boinc boinc    590100 Nov 24 16:22 input.tar.gz
[2025-11-25 00:31:28] -rw-r--r-- 2 boinc boinc     15847 Nov 24 16:22 start_atlas.sh
[2025-11-25 00:31:28] -rw------- 1 boinc boinc 902136444 Nov 25 00:30 HITS.pool.root.1
[2025-11-25 00:31:28] -rw------- 1 boinc boinc   5324800 Nov 25 00:31 result.tar.gz
00:31:29 (3881236): run_atlas exited; CPU time 86579.800445
00:31:29 (3881236): called boinc_finish(0)

</stderr_txt>
]]>

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