Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:08:46 (1007080): wrapper (7.7.26015): starting
08:08:46 (1007080): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 08:08:46] Arguments: --nthreads 3
[2025-11-24 08:08:46] Threads: 3
[2025-11-24 08:08:46] Checking for CVMFS
[2025-11-24 08:08:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:08:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:08:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:08:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:08:46] 2.9.2.0 4065016 8035 84972 153236 0 81 34257806 36864001 0 130560 0 2995069 99.911 445110 7065 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 08:08:46] CVMFS is ok
[2025-11-24 08:08:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:08:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:08:46] Further information can be found at the LHC@home message board.
[2025-11-24 08:08:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:08:46] Checking for apptainer binary...
[2025-11-24 08:08:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:08:46] Running /usr/bin/apptainer --version
[2025-11-24 08:08:46] apptainer version 1.4.1-1.1
[2025-11-24 08:08:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:08:46] thA312a
[2025-11-24 08:08:46] apptainer works
[2025-11-24 08:08:46] Set ATHENA_PROC_NUMBER=3
[2025-11-24 08:08:46] Set ATHENA_CORE_NUMBER=3
[2025-11-24 08:08:46] Starting ATLAS job with PandaID=6894268435
[2025-11-24 08:08:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 15:57:31]  *** The last 200 lines of the pilot log: ***
[2025-11-24 15:57:31] 2025-11-24 14:56:33,101 | INFO     | executing command: cat /etc/os-release
[2025-11-24 15:57:31] 2025-11-24 14:56:33,111 | INFO     | cat /etc/os-release:
[2025-11-24 15:57:31] NAME="CentOS Linux"
[2025-11-24 15:57:31] VERSION="7 (Core)"
[2025-11-24 15:57:31] ID="centos"
[2025-11-24 15:57:31] ID_LIKE="rhel fedora"
[2025-11-24 15:57:31] VERSION_ID="7"
[2025-11-24 15:57:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 15:57:31] ANSI_COLOR="0;31"
[2025-11-24 15:57:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 15:57:31] HOME_URL="https://www.centos.org/"
[2025-11-24 15:57:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 15:57:31] 
[2025-11-24 15:57:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 15:57:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 15:57:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 15:57:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 15:57:31] 
[2025-11-24 15:57:31] 2025-11-24 14:56:33,111 | INFO     | ***************************************
[2025-11-24 15:57:31] 2025-11-24 14:56:33,614 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 15:57:31] 2025-11-24 14:56:33,628 | INFO     | sufficient remaining disk space (266909777920 B)
[2025-11-24 15:57:31] 2025-11-24 14:56:33,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 15:57:31] 2025-11-24 14:56:33,629 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 15:57:31] 2025-11-24 14:56:33,629 | INFO     | update_server=False
[2025-11-24 15:57:31] 2025-11-24 14:56:33,629 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 15:57:31] 2025-11-24 14:56:33,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:57:31] 2025-11-24 14:56:33,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:57:31] 2025-11-24 14:56:33,629 | INFO     | aborting loop
[2025-11-24 15:57:31] 2025-11-24 14:56:33,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 15:57:31] 2025-11-24 14:56:33,763 | INFO     | all job control threads have been joined
[2025-11-24 15:57:31] 2025-11-24 14:56:34,427 | INFO     | all data control threads have been joined
[2025-11-24 15:57:31] 2025-11-24 14:56:34,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 15:57:31] 2025-11-24 14:56:34,527 | INFO     | all payload control threads have been joined
[2025-11-24 15:57:31] 2025-11-24 14:56:34,634 | INFO     | [job] retrieve thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:34,635 | INFO     | [job] queue monitor thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:34,635 | INFO     | [job] job monitor thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:34,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:34,769 | INFO     | [job] control thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:34,798 | INFO     | [payload] failed_post thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:35,086 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:35,272 | INFO     | [data] copytool_in thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:35,365 | INFO     | [job] validate thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:35,366 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:35,432 | INFO     | [data] control thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:35,532 | INFO     | [payload] control thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:35,566 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:35,618 | INFO     | [payload] validate_post thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:35,635 | INFO     | [data] copytool_out thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:56:38,443 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 15:57:31] 2025-11-24 14:57:04,589 | INFO     | PID=1010804 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 15:57:31] 2025-11-24 14:57:04,589 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 15:57:31] 2025-11-24 14:57:04,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 15:57:31] 2025-11-24 14:57:04,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 15:57:31] 2025-11-24 14:57:24,543 | INFO     | [monitor] cgroup control has ended
[2025-11-24 15:57:31] 2025-11-24 14:57:25,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139642721474368)>', '<ExcThread(monitor, started 139642003257088)>']
[2025-11-24 15:57:31] 2025-11-24 14:57:26,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 15:57:31] 2025-11-24 14:57:26,703 | INFO     | [monitor] control thread has ended
[2025-11-24 15:57:31] 2025-11-24 14:57:31,002 | INFO     | all workflow threads have been joined
[2025-11-24 15:57:31] 2025-11-24 14:57:31,002 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 15:57:31] 2025-11-24 14:57:31,002 | INFO     | traces error code: 0
[2025-11-24 15:57:31] 2025-11-24 14:57:31,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 15:57:31] 2025-11-24 14:57:31,054 [wrapper] ==== pilot stdout END ====
[2025-11-24 15:57:31] 2025-11-24 14:57:31,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 15:57:31] 2025-11-24 14:57:31,059 [wrapper] pilotpid: 1010804
[2025-11-24 15:57:31] 2025-11-24 14:57:31,062 [wrapper] Pilot exit status: 0
[2025-11-24 15:57:31] 2025-11-24 14:57:31,070 [wrapper] pandaids: 6894268435
[2025-11-24 15:57:31] 2025-11-24 14:57:31,089 [wrapper] cleanup supervisor_pilot 1071662 1010805
[2025-11-24 15:57:31] 2025-11-24 14:57:31,092 [wrapper] Test setup, not cleaning
[2025-11-24 15:57:31] 2025-11-24 14:57:31,094 [wrapper] apfmon messages muted
[2025-11-24 15:57:31] 2025-11-24 14:57:31,097 [wrapper] ==== wrapper stdout END ====
[2025-11-24 15:57:31] 2025-11-24 14:57:31,099 [wrapper] ==== wrapper stderr END ====
[2025-11-24 15:57:31]  *** Error codes and diagnostics ***
[2025-11-24 15:57:31]     "exeErrorCode": 0,
[2025-11-24 15:57:31]     "exeErrorDiag": "",
[2025-11-24 15:57:31]     "pilotErrorCode": 0,
[2025-11-24 15:57:31]     "pilotErrorDiag": "",
[2025-11-24 15:57:31]  *** Listing of results directory ***
[2025-11-24 15:57:31] total 1297684
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-24 15:57:31] -rwx------ 1 boinc boinc     36292 Nov 21 06:48 runpilot2-wrapper.sh
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:48 queuedata.json
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc       100 Nov 24 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 15:57:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 08:08 run_atlas
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc       105 Nov 24 08:08 job.xml
[2025-11-24 15:57:31] -rw-r--r-- 2 boinc boinc 407855003 Nov 24 08:08 EVNT.47493127._002265.pool.root.1
[2025-11-24 15:57:31] -rw-r--r-- 2 boinc boinc    590105 Nov 24 08:08 input.tar.gz
[2025-11-24 15:57:31] -rw-r--r-- 2 boinc boinc     15847 Nov 24 08:08 start_atlas.sh
[2025-11-24 15:57:31] drwxrwx--x 2 boinc boinc      4096 Nov 24 08:08 shared
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc         0 Nov 24 08:08 boinc_setup_complete
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc      6447 Nov 24 08:08 init_data.xml
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc         0 Nov 24 08:08 boinc_lockfile
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc      2786 Nov 24 08:08 pandaJob.out
[2025-11-24 15:57:31] -rw------- 1 boinc boinc    989786 Nov 24 08:08 agis_schedconf.cvmfs.json
[2025-11-24 15:57:31] drwx------ 5 boinc boinc      4096 Nov 24 08:08 pilot3
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc       532 Nov 24 15:53 boinc_task_state.xml
[2025-11-24 15:57:31] -rw------- 1 boinc boinc 906846618 Nov 24 15:56 HITS.47533967._002369.pool.root.1
[2025-11-24 15:57:31] -rw------- 1 boinc boinc        95 Nov 24 15:56 pilot_heartbeat.json
[2025-11-24 15:57:31] -rw------- 1 boinc boinc      1022 Nov 24 15:56 memory_monitor_summary.json
[2025-11-24 15:57:31] -rw------- 1 boinc boinc   1516227 Nov 24 15:56 agis_ddmendpoints.agis.ALL.json
[2025-11-24 15:57:31] -rw------- 1 boinc boinc   1162392 Nov 24 15:56 log.47533967._002369.job.log.tgz.1
[2025-11-24 15:57:31] -rw------- 1 boinc boinc      8555 Nov 24 15:56 heartbeat.json
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc      8192 Nov 24 15:57 boinc_mmap_file
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc        28 Nov 24 15:57 wrapper_checkpoint.txt
[2025-11-24 15:57:31] -rw------- 1 boinc boinc      4752 Nov 24 15:57 pilotlog.txt
[2025-11-24 15:57:31] -rw------- 1 boinc boinc   3950213 Nov 24 15:57 log.47533967._002369.job.log.1
[2025-11-24 15:57:31] -rw------- 1 boinc boinc       353 Nov 24 15:57 output.list
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc       620 Nov 24 15:57 runtime_log
[2025-11-24 15:57:31] -rw------- 1 boinc boinc   5130240 Nov 24 15:57 result.tar.gz
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc      8903 Nov 24 15:57 runtime_log.err
[2025-11-24 15:57:31] -rw------- 1 boinc boinc       666 Nov 24 15:57 S4ZLDmLBZg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDOHKDm8J3OLo.diag
[2025-11-24 15:57:31] -rw-r--r-- 1 boinc boinc      8886 Nov 24 15:57 stderr.txt
[2025-11-24 15:57:31] HITS file was successfully produced:
[2025-11-24 15:57:31] -rw------- 1 boinc boinc 906846618 Nov 24 15:56 shared/HITS.pool.root.1
[2025-11-24 15:57:31]  *** Contents of shared directory: ***
[2025-11-24 15:57:31] total 1289508
[2025-11-24 15:57:31] -rw-r--r-- 2 boinc boinc 407855003 Nov 24 08:08 ATLAS.root_0
[2025-11-24 15:57:31] -rw-r--r-- 2 boinc boinc    590105 Nov 24 08:08 input.tar.gz
[2025-11-24 15:57:31] -rw-r--r-- 2 boinc boinc     15847 Nov 24 08:08 start_atlas.sh
[2025-11-24 15:57:31] -rw------- 1 boinc boinc 906846618 Nov 24 15:56 HITS.pool.root.1
[2025-11-24 15:57:31] -rw------- 1 boinc boinc   5130240 Nov 24 15:57 result.tar.gz
15:57:32 (1007080): run_atlas exited; CPU time 82825.810954
15:57:32 (1007080): called boinc_finish(0)

</stderr_txt>
]]>

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