Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
00:34:52 (3772653): wrapper (7.7.26015): starting
00:34:52 (3772653): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 00:34:52] Arguments: --nthreads 12
[2025-11-24 00:34:52] Threads: 12
[2025-11-24 00:34:52] Checking for CVMFS
[2025-11-24 00:34:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:34:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:34:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:34:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:34:52] 2.12.7.0 2523782 6924 79032 153235 2 81 3346959 4194305 3066 130560 0 13069821 99.979 432175 1784 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2025-11-24 00:34:52] CVMFS is ok
[2025-11-24 00:34:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:34:52] Checking for apptainer binary...
[2025-11-24 00:34:52] apptainer is not installed, using version from CVMFS
[2025-11-24 00:34:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:34:52] Trebeth
[2025-11-24 00:34:52] apptainer works
[2025-11-24 00:34:52] Set ATHENA_PROC_NUMBER=12
[2025-11-24 00:34:52] Set ATHENA_CORE_NUMBER=12
[2025-11-24 00:34:52] Starting ATLAS job with PandaID=6893858959
[2025-11-24 00:34:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 06:45:07]  *** The last 200 lines of the pilot log: ***
[2025-11-24 06:45:07] 2025-11-24 11:44:35,954 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 06:45:07] 2025-11-24 11:44:35,954 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 06:45:07] 2025-11-24 11:44:35,958 | INFO     | fitting pss+swap vs Time
[2025-11-24 06:45:07] 2025-11-24 11:44:35,958 | INFO     | sum of square deviations: 14831933227.542734
[2025-11-24 06:45:07] 2025-11-24 11:44:35,960 | INFO     | sum of deviations: 439513467043.1902
[2025-11-24 06:45:07] 2025-11-24 11:44:35,960 | INFO     | mean x: 1763973568.936639
[2025-11-24 06:45:07] 2025-11-24 11:44:35,960 | INFO     | mean y: 3387379.008264463
[2025-11-24 06:45:07] 2025-11-24 11:44:35,960 | INFO     | intersect: -52268297448.7111
[2025-11-24 06:45:07] 2025-11-24 11:44:35,960 | INFO     | chi2: 8.670095089545944
[2025-11-24 06:45:07] 2025-11-24 11:44:35,960 | INFO     | sum of square deviations: 14227551170.595024
[2025-11-24 06:45:07] 2025-11-24 11:44:35,962 | INFO     | sum of deviations: 577388110453.2544
[2025-11-24 06:45:07] 2025-11-24 11:44:35,962 | INFO     | mean x: 1763973416.4497206
[2025-11-24 06:45:07] 2025-11-24 11:44:35,962 | INFO     | mean y: 3422141.0418994413
[2025-11-24 06:45:07] 2025-11-24 11:44:35,962 | INFO     | intersect: -71582844926.38347
[2025-11-24 06:45:07] 2025-11-24 11:44:35,962 | INFO     | chi2: 5.710768601435865
[2025-11-24 06:45:07] 2025-11-24 11:44:35,963 | INFO     | current chi2=5.710768601435865 (change=34.13257245215588 %)
[2025-11-24 06:45:07] 2025-11-24 11:44:35,963 | INFO     | sum of square deviations: 13639755443.274748
[2025-11-24 06:45:07] 2025-11-24 11:44:35,964 | INFO     | sum of deviations: 578258062615.6682
[2025-11-24 06:45:07] 2025-11-24 11:44:35,964 | INFO     | mean x: 1763973263.9546742
[2025-11-24 06:45:07] 2025-11-24 11:44:35,964 | INFO     | mean y: 3422328.2917847023
[2025-11-24 06:45:07] 2025-11-24 11:44:35,965 | INFO     | intersect: -74780305749.7073
[2025-11-24 06:45:07] 2025-11-24 11:44:35,965 | INFO     | chi2: 5.607603555506154
[2025-11-24 06:45:07] 2025-11-24 11:44:35,965 | INFO     | current chi2=5.607603555506154 (change=1.8065001951536332 %)
[2025-11-24 06:45:07] 2025-11-24 11:44:35,965 | INFO     | right removable region: 352
[2025-11-24 06:45:07] 2025-11-24 11:44:35,965 | INFO     | sum of square deviations: 14227343770.595024
[2025-11-24 06:45:07] 2025-11-24 11:44:35,967 | INFO     | sum of deviations: 290424477594.71497
[2025-11-24 06:45:07] 2025-11-24 11:44:35,967 | INFO     | mean x: 1763973721.4497206
[2025-11-24 06:45:07] 2025-11-24 11:44:35,967 | INFO     | mean y: 3424961.150837989
[2025-11-24 06:45:07] 2025-11-24 11:44:35,967 | INFO     | intersect: -36004782530.23352
[2025-11-24 06:45:07] 2025-11-24 11:44:35,967 | INFO     | chi2: 5.448931195002292
[2025-11-24 06:45:07] 2025-11-24 11:44:35,967 | INFO     | current chi2=5.448931195002292 (change=37.15257861966939 %)
[2025-11-24 06:45:07] 2025-11-24 11:44:35,968 | INFO     | sum of square deviations: 13639405788.52121
[2025-11-24 06:45:07] 2025-11-24 11:44:35,969 | INFO     | sum of deviations: 163306192107.56363
[2025-11-24 06:45:07] 2025-11-24 11:44:35,969 | INFO     | mean x: 1763973873.963173
[2025-11-24 06:45:07] 2025-11-24 11:44:35,969 | INFO     | mean y: 3457926.8895184137
[2025-11-24 06:45:07] 2025-11-24 11:44:35,969 | INFO     | intersect: -21116806460.037678
[2025-11-24 06:45:07] 2025-11-24 11:44:35,969 | INFO     | chi2: 3.277633416866038
[2025-11-24 06:45:07] 2025-11-24 11:44:35,970 | INFO     | current chi2=3.277633416866038 (change=39.84814086343662 %)
[2025-11-24 06:45:07] 2025-11-24 11:44:35,970 | INFO     | sum of square deviations: 13067994388.514294
[2025-11-24 06:45:07] 2025-11-24 11:44:35,971 | INFO     | sum of deviations: 131428135179.75879
[2025-11-24 06:45:07] 2025-11-24 11:44:35,971 | INFO     | mean x: 1763974026.4626436
[2025-11-24 06:45:07] 2025-11-24 11:44:35,971 | INFO     | mean y: 3466423.827586207
[2025-11-24 06:45:07] 2025-11-24 11:44:35,971 | INFO     | intersect: -17737267916.193295
[2025-11-24 06:45:07] 2025-11-24 11:44:35,972 | INFO     | chi2: 3.194926450566608
[2025-11-24 06:45:07] 2025-11-24 11:44:35,972 | INFO     | current chi2=3.194926450566608 (change=2.5233745138744452 %)
[2025-11-24 06:45:07] 2025-11-24 11:44:35,972 | INFO     | left removable region: 30
[2025-11-24 06:45:07] 2025-11-24 11:44:35,972 | INFO     | sum of square deviations: 10352457046.388186
[2025-11-24 06:45:07] 2025-11-24 11:44:35,973 | INFO     | sum of deviations: 223054381127.792
[2025-11-24 06:45:07] 2025-11-24 11:44:35,973 | INFO     | mean x: 1763974148.4813664
[2025-11-24 06:45:07] 2025-11-24 11:44:35,974 | INFO     | mean y: 3519170.381987578
[2025-11-24 06:45:07] 2025-11-24 11:44:35,974 | INFO     | intersect: -38003126039.72376
[2025-11-24 06:45:07] 2025-11-24 11:44:35,974 | INFO     | chi2: 0.021545404773650252
[2025-11-24 06:45:07] 2025-11-24 11:44:35,974 | INFO     | current memory leak: 21.55 B/s (using 322 data points, chi2=0.02)
[2025-11-24 06:45:07] 2025-11-24 11:44:35,974 | INFO     | could have reported an average CPU frequency of 3031 MHz (16 samples)
[2025-11-24 06:45:07] 2025-11-24 11:44:35,974 | INFO     | ..............................
[2025-11-24 06:45:07] 2025-11-24 11:44:35,975 | INFO     | . Timing measurements:
[2025-11-24 06:45:07] 2025-11-24 11:44:35,975 | INFO     | . get job = 0 s
[2025-11-24 06:45:07] 2025-11-24 11:44:35,975 | INFO     | . initial setup = 5 s
[2025-11-24 06:45:07] 2025-11-24 11:44:35,975 | INFO     | . payload setup = 4 s
[2025-11-24 06:45:07] 2025-11-24 11:44:35,975 | INFO     | . stage-in = 0 s
[2025-11-24 06:45:07] 2025-11-24 11:44:35,975 | INFO     | . payload execution = 22140 s
[2025-11-24 06:45:07] 2025-11-24 11:44:35,975 | INFO     | . stage-out = 2 s
[2025-11-24 06:45:07] 2025-11-24 11:44:35,975 | INFO     | . log creation = 0 s
[2025-11-24 06:45:07] 2025-11-24 11:44:35,975 | INFO     | ..............................
[2025-11-24 06:45:07] 2025-11-24 11:44:36,087 | INFO     | 
[2025-11-24 06:45:07] 2025-11-24 11:44:36,087 | INFO     | job summary report
[2025-11-24 06:45:07] 2025-11-24 11:44:36,088 | INFO     | --------------------------------------------------
[2025-11-24 06:45:07] 2025-11-24 11:44:36,088 | INFO     | PanDA job id: 6893858959
[2025-11-24 06:45:07] 2025-11-24 11:44:36,088 | INFO     | task id: 47523449
[2025-11-24 06:45:07] 2025-11-24 11:44:36,088 | INFO     | errors: (none)
[2025-11-24 06:45:07] 2025-11-24 11:44:36,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 06:45:07] 2025-11-24 11:44:36,088 | INFO     | pilot state: finished 
[2025-11-24 06:45:07] 2025-11-24 11:44:36,088 | INFO     | transexitcode: 0
[2025-11-24 06:45:07] 2025-11-24 11:44:36,088 | INFO     | exeerrorcode: 0
[2025-11-24 06:45:07] 2025-11-24 11:44:36,088 | INFO     | exeerrordiag: 
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | exitcode: 0
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | exitmsg: OK
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | cpuconsumptiontime: 251979 s
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | nevents: 1000
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | neventsw: 0
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | pid: 3783590
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | pgrp: 3783590
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | corecount: 12
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | event service: False
[2025-11-24 06:45:07] 2025-11-24 11:44:36,089 | INFO     | sizes: {0: 2298814, 4: 2299076, 11: 2299104, 22148: 2334423, 22151: 2344222, 22154: 2344278, 22157: 2344652}
[2025-11-24 06:45:07] 2025-11-24 11:44:36,090 | INFO     | --------------------------------------------------
[2025-11-24 06:45:07] 2025-11-24 11:44:36,090 | INFO     | 
[2025-11-24 06:45:07] 2025-11-24 11:44:36,090 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-24 06:45:07] 2025-11-24 11:44:36,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,111 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,111 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 06:45:07] 2025-11-24 11:44:36,113 | INFO     | job 6893858959 has completed (purged errors)
[2025-11-24 06:45:07] 2025-11-24 11:44:36,113 | INFO     | overall cleanup function is called
[2025-11-24 06:45:07] 2025-11-24 11:44:37,130 | INFO     | --- collectZombieJob: --- 10, [3783590]
[2025-11-24 06:45:07] 2025-11-24 11:44:37,131 | INFO     | zombie collector waiting for pid 3783590
[2025-11-24 06:45:07] 2025-11-24 11:44:37,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 06:45:07] 2025-11-24 11:44:37,131 | INFO     | collected zombie processes
[2025-11-24 06:45:07] 2025-11-24 11:44:37,131 | INFO     | will attempt to kill all subprocesses of pid=3783590
[2025-11-24 06:45:07] 2025-11-24 11:44:37,372 | INFO     | process IDs to be killed: [3783590] (in reverse order)
[2025-11-24 06:45:07] 2025-11-24 11:44:37,446 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 06:45:07] 2025-11-24 11:44:37,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 06:45:07] 2025-11-24 11:44:37,453 | INFO     | did not find any defunct processes belonging to 3783590
[2025-11-24 06:45:07] 2025-11-24 11:44:37,458 | INFO     | did not find any defunct processes belonging to 3783590
[2025-11-24 06:45:07] 2025-11-24 11:44:37,460 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 06:45:07] 2025-11-24 11:44:37,460 | INFO     | ready for new job
[2025-11-24 06:45:07] 2025-11-24 11:44:37,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 06:45:07] 2025-11-24 11:44:37,464 | INFO     | ***************************************
[2025-11-24 06:45:07] 2025-11-24 11:44:37,464 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 06:45:07] 2025-11-24 11:44:37,464 | INFO     | ***************************************
[2025-11-24 06:45:07] 2025-11-24 11:44:37,464 | INFO     | 
[2025-11-24 06:45:07] 2025-11-24 11:44:37,485 | INFO     | architecture information:
[2025-11-24 06:45:07] 2025-11-24 11:44:37,486 | INFO     | executing command: cat /etc/os-release
[2025-11-24 06:45:07] 2025-11-24 11:44:37,506 | INFO     | cat /etc/os-release:
[2025-11-24 06:45:07] NAME="CentOS Linux"
[2025-11-24 06:45:07] VERSION="7 (Core)"
[2025-11-24 06:45:07] ID="centos"
[2025-11-24 06:45:07] ID_LIKE="rhel fedora"
[2025-11-24 06:45:07] VERSION_ID="7"
[2025-11-24 06:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 06:45:07] ANSI_COLOR="0;31"
[2025-11-24 06:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 06:45:07] HOME_URL="https://www.centos.org/"
[2025-11-24 06:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 06:45:07] 
[2025-11-24 06:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 06:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 06:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 06:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 06:45:07] 
[2025-11-24 06:45:07] 2025-11-24 11:44:37,506 | INFO     | ***************************************
[2025-11-24 06:45:07] 2025-11-24 11:44:38,009 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-24 06:45:07] 2025-11-24 11:44:38,025 | INFO     | sufficient remaining disk space (395691687936 B)
[2025-11-24 06:45:07] 2025-11-24 11:44:38,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 06:45:07] 2025-11-24 11:44:38,025 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 06:45:07] 2025-11-24 11:44:38,025 | INFO     | update_server=False
[2025-11-24 06:45:07] 2025-11-24 11:44:38,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 06:45:07] 2025-11-24 11:44:38,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:45:07] 2025-11-24 11:44:38,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:45:07] 2025-11-24 11:44:38,026 | INFO     | aborting loop
[2025-11-24 06:45:07] 2025-11-24 11:44:38,233 | INFO     | all data control threads have been joined
[2025-11-24 06:45:07] 2025-11-24 11:44:38,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 06:45:07] 2025-11-24 11:44:38,933 | INFO     | all job control threads have been joined
[2025-11-24 06:45:07] 2025-11-24 11:44:38,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 06:45:07] 2025-11-24 11:44:39,030 | INFO     | [job] job monitor thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,031 | INFO     | [job] retrieve thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,032 | INFO     | [job] queue monitor thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,238 | INFO     | [data] control thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,250 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,277 | INFO     | [data] copytool_in thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,363 | INFO     | [payload] failed_post thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,394 | INFO     | [job] validate thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,498 | INFO     | all payload control threads have been joined
[2025-11-24 06:45:07] 2025-11-24 11:44:39,570 | INFO     | [payload] validate_post thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,694 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,939 | INFO     | [job] control thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:39,969 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:40,292 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:40,298 | INFO     | [data] copytool_out thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:40,502 | INFO     | [payload] control thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:40,814 | INFO     | [monitor] cgroup control has ended
[2025-11-24 06:45:07] 2025-11-24 11:44:42,963 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 06:45:07] 2025-11-24 11:44:44,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394376505152)>', '<ExcThread(monitor, started 140393773504256)>']
[2025-11-24 06:45:07] 2025-11-24 11:44:49,530 | INFO     | all workflow threads have been joined
[2025-11-24 06:45:07] 2025-11-24 11:44:49,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 06:45:07] 2025-11-24 11:44:49,531 | INFO     | traces error code: 0
[2025-11-24 06:45:07] 2025-11-24 11:44:49,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 06:45:07] 2025-11-24 11:45:07,615 | INFO     | PID=3776632 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 06:45:07] 2025-11-24 11:45:07,615 | INFO     | .. there are 3 such processes running
[2025-11-24 06:45:07] 2025-11-24 11:45:07,615 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 06:45:07] 2025-11-24 11:45:07,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 06:45:07] 2025-11-24 11:45:07,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 06:45:07] 2025-11-24 11:45:07,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 06:45:07] 2025-11-24 11:45:07,616 | INFO     | [monitor] control thread has ended
[2025-11-24 06:45:07] 2025-11-24 11:45:07,716 [wrapper] ==== pilot stdout END ====
[2025-11-24 06:45:07] 2025-11-24 11:45:07,718 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 06:45:07] 2025-11-24 11:45:07,720 [wrapper] pilotpid: 3776632
[2025-11-24 06:45:07] 2025-11-24 11:45:07,722 [wrapper] Pilot exit status: 0
[2025-11-24 06:45:07] 2025-11-24 11:45:07,728 [wrapper] pandaids: 6893858959
[2025-11-24 06:45:07] 2025-11-24 11:45:07,759 [wrapper] cleanup supervisor_pilot 4036068 3776633
[2025-11-24 06:45:07] 2025-11-24 11:45:07,761 [wrapper] Test setup, not cleaning
[2025-11-24 06:45:07] 2025-11-24 11:45:07,764 [wrapper] apfmon messages muted
[2025-11-24 06:45:07] 2025-11-24 11:45:07,765 [wrapper] ==== wrapper stdout END ====
[2025-11-24 06:45:07] 2025-11-24 11:45:07,767 [wrapper] ==== wrapper stderr END ====
[2025-11-24 06:45:07]  *** Error codes and diagnostics ***
[2025-11-24 06:45:07]     "exeErrorCode": 0,
[2025-11-24 06:45:07]     "exeErrorDiag": "",
[2025-11-24 06:45:07]     "pilotErrorCode": 0,
[2025-11-24 06:45:07]     "pilotErrorDiag": "",
[2025-11-24 06:45:07]  *** Listing of results directory ***
[2025-11-24 06:45:07] total 1312424
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-24 06:45:07] -rwx------ 1 boinc boinc     36292 Nov 20 08:25 runpilot2-wrapper.sh
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc      5112 Nov 20 08:25 queuedata.json
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc       100 Nov 24 00:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 06:45:07] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 00:34 run_atlas
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc       105 Nov 24 00:34 job.xml
[2025-11-24 06:45:07] -rw-r--r-- 2 boinc boinc 410078541 Nov 24 00:34 EVNT.47493127._000521.pool.root.1
[2025-11-24 06:45:07] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:34 start_atlas.sh
[2025-11-24 06:45:07] drwxrwx--x 2 boinc boinc      4096 Nov 24 00:34 shared
[2025-11-24 06:45:07] -rw-r--r-- 2 boinc boinc    590098 Nov 24 00:34 input.tar.gz
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc      7603 Nov 24 00:34 init_data.xml
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc         0 Nov 24 00:34 boinc_lockfile
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc      2786 Nov 24 00:34 pandaJob.out
[2025-11-24 06:45:07] -rw------- 1 boinc boinc        50 Nov 24 00:34 setup.sh.local
[2025-11-24 06:45:07] -rw------- 1 boinc boinc    989786 Nov 24 00:34 agis_schedconf.cvmfs.json
[2025-11-24 06:45:07] drwx------ 5 boinc boinc      4096 Nov 24 00:35 pilot3
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc       532 Nov 24 06:37 boinc_task_state.xml
[2025-11-24 06:45:07] -rw------- 1 boinc boinc 919317305 Nov 24 06:43 HITS.47523449._005210.pool.root.1
[2025-11-24 06:45:07] -rw------- 1 boinc boinc      1044 Nov 24 06:44 memory_monitor_summary.json
[2025-11-24 06:45:07] -rw------- 1 boinc boinc        95 Nov 24 06:44 pilot_heartbeat.json
[2025-11-24 06:45:07] -rw------- 1 boinc boinc   1516227 Nov 24 06:44 agis_ddmendpoints.agis.ALL.json
[2025-11-24 06:45:07] -rw------- 1 boinc boinc   2127225 Nov 24 06:44 log.47523449._005210.job.log.tgz.1
[2025-11-24 06:45:07] -rw------- 1 boinc boinc      8598 Nov 24 06:44 heartbeat.json
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc      8192 Nov 24 06:45 boinc_mmap_file
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc        29 Nov 24 06:45 wrapper_checkpoint.txt
[2025-11-24 06:45:07] -rw------- 1 boinc boinc       822 Nov 24 06:45 pilotlog.txt
[2025-11-24 06:45:07] -rw------- 1 boinc boinc   3181900 Nov 24 06:45 log.47523449._005210.job.log.1
[2025-11-24 06:45:07] -rw------- 1 boinc boinc       353 Nov 24 06:45 output.list
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc       620 Nov 24 06:45 runtime_log
[2025-11-24 06:45:07] -rw------- 1 boinc boinc   5324800 Nov 24 06:45 result.tar.gz
[2025-11-24 06:45:07] -rw------- 1 boinc boinc       658 Nov 24 06:45 VMbLDm4pJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfvHKDm2RMtYn.diag
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc      9405 Nov 24 06:45 runtime_log.err
[2025-11-24 06:45:07] -rw-r--r-- 1 boinc boinc     20836 Nov 24 06:45 stderr.txt
[2025-11-24 06:45:07] HITS file was successfully produced:
[2025-11-24 06:45:07] -rw------- 1 boinc boinc 919317305 Nov 24 06:43 shared/HITS.pool.root.1
[2025-11-24 06:45:07]  *** Contents of shared directory: ***
[2025-11-24 06:45:07] total 1304044
[2025-11-24 06:45:07] -rw-r--r-- 2 boinc boinc 410078541 Nov 24 00:34 ATLAS.root_0
[2025-11-24 06:45:07] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:34 start_atlas.sh
[2025-11-24 06:45:07] -rw-r--r-- 2 boinc boinc    590098 Nov 24 00:34 input.tar.gz
[2025-11-24 06:45:07] -rw------- 1 boinc boinc 919317305 Nov 24 06:43 HITS.pool.root.1
[2025-11-24 06:45:07] -rw------- 1 boinc boinc   5324800 Nov 24 06:45 result.tar.gz
06:45:09 (3772653): run_atlas exited; CPU time 251640.431125
06:45:09 (3772653): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN