Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:16:09 (30034): wrapper (7.7.26015): starting
17:16:09 (30034): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 17:16:09] Arguments: --nthreads 12
[2025-11-21 17:16:09] Threads: 12
[2025-11-21 17:16:09] Checking for CVMFS
[2025-11-21 17:16:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 17:16:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 17:16:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 17:16:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 17:16:10] 2.11.2.0 3297 281023 92916 153145 2 81 19176349 20275200 1 130560 2 127139247 99.971 15987473 13834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 17:16:10] CVMFS is ok
[2025-11-21 17:16:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 17:16:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 17:16:10] Further information can be found at the LHC@home message board.
[2025-11-21 17:16:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 17:16:10] Checking for apptainer binary...
[2025-11-21 17:16:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 17:16:10] Running /usr/bin/apptainer --version
[2025-11-21 17:16:10] apptainer version 1.3.2-1.el7
[2025-11-21 17:16:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 17:16:11] c-205-22.aglt2.org
[2025-11-21 17:16:11] apptainer works
[2025-11-21 17:16:11] Set ATHENA_PROC_NUMBER=12
[2025-11-21 17:16:11] Set ATHENA_CORE_NUMBER=12
[2025-11-21 17:16:11] Starting ATLAS job with PandaID=6894239439
[2025-11-21 17:16:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 00:25:14]  *** The last 200 lines of the pilot log: ***
[2025-11-22 00:25:14] 2025-11-22 05:24:26,769 | INFO     | time since job start (25680s) is within the limit (172800.0s)
[2025-11-22 00:25:14] 2025-11-22 05:24:28,153 | INFO     | monitor loop #1924: job 0:6894239439 is in state 'finished'
[2025-11-22 00:25:14] 2025-11-22 05:24:28,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:25:14] 2025-11-22 05:24:28,774 | INFO     | time since job start (25682s) is within the limit (172800.0s)
[2025-11-22 00:25:14] 2025-11-22 05:24:29,470 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 00:25:14] 2025-11-22 05:24:29,474 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-22 00:25:14] 2025-11-22 05:24:29,476 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894239439/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 00:25:14] 2025-11-22 05:24:29,477 | INFO     | extracted standard info from prmon json
[2025-11-22 00:25:14] 2025-11-22 05:24:29,477 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 00:25:14] 2025-11-22 05:24:29,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 00:25:14] 2025-11-22 05:24:29,485 | INFO     | fitting pss+swap vs Time
[2025-11-22 00:25:14] 2025-11-22 05:24:29,486 | INFO     | sum of square deviations: 23138225443.011913
[2025-11-22 00:25:14] 2025-11-22 05:24:29,489 | INFO     | sum of deviations: 383699520769.7961
[2025-11-22 00:25:14] 2025-11-22 05:24:29,489 | INFO     | mean x: 1763776225.2232778
[2025-11-22 00:25:14] 2025-11-22 05:24:29,490 | INFO     | mean y: 3416655.9596199524
[2025-11-22 00:25:14] 2025-11-22 05:24:29,490 | INFO     | intersect: -29245157052.951283
[2025-11-22 00:25:14] 2025-11-22 05:24:29,490 | INFO     | chi2: 6.508017657798597
[2025-11-22 00:25:14] 2025-11-22 05:24:29,491 | INFO     | sum of square deviations: 22323615582.759693
[2025-11-22 00:25:14] 2025-11-22 05:24:29,494 | INFO     | sum of deviations: 555585290417.3318
[2025-11-22 00:25:14] 2025-11-22 05:24:29,495 | INFO     | mean x: 1763776072.7259614
[2025-11-22 00:25:14] 2025-11-22 05:24:29,495 | INFO     | mean y: 3448805.608173077
[2025-11-22 00:25:14] 2025-11-22 05:24:29,495 | INFO     | intersect: -43893026564.330696
[2025-11-22 00:25:14] 2025-11-22 05:24:29,495 | INFO     | chi2: 3.0972405329292547
[2025-11-22 00:25:14] 2025-11-22 05:24:29,496 | INFO     | current chi2=3.0972405329292547 (change=52.40884865735094 %)
[2025-11-22 00:25:14] 2025-11-22 05:24:29,496 | INFO     | sum of square deviations: 21528354922.501175
[2025-11-22 00:25:14] 2025-11-22 05:24:29,500 | INFO     | sum of deviations: 599159619864.3988
[2025-11-22 00:25:14] 2025-11-22 05:24:29,500 | INFO     | mean x: 1763775920.2287104
[2025-11-22 00:25:14] 2025-11-22 05:24:29,500 | INFO     | mean y: 3457108.01703163
[2025-11-22 00:25:14] 2025-11-22 05:24:29,500 | INFO     | intersect: -49084516111.23147
[2025-11-22 00:25:14] 2025-11-22 05:24:29,501 | INFO     | chi2: 2.599275062480242
[2025-11-22 00:25:14] 2025-11-22 05:24:29,501 | INFO     | current chi2=2.599275062480242 (change=16.077713860281158 %)
[2025-11-22 00:25:14] 2025-11-22 05:24:29,501 | INFO     | right removable region: 410
[2025-11-22 00:25:14] 2025-11-22 05:24:29,501 | INFO     | sum of square deviations: 22323558242.75969
[2025-11-22 00:25:14] 2025-11-22 05:24:29,505 | INFO     | sum of deviations: 239901433802.9282
[2025-11-22 00:25:14] 2025-11-22 05:24:29,505 | INFO     | mean x: 1763776377.7259614
[2025-11-22 00:25:14] 2025-11-22 05:24:29,505 | INFO     | mean y: 3443498.8677884615
[2025-11-22 00:25:14] 2025-11-22 05:24:29,505 | INFO     | intersect: -18951083253.668617
[2025-11-22 00:25:14] 2025-11-22 05:24:29,506 | INFO     | chi2: 4.082630962936055
[2025-11-22 00:25:14] 2025-11-22 05:24:29,506 | INFO     | current chi2=4.082630962936055 (change=37.26767231425972 %)
[2025-11-22 00:25:14] 2025-11-22 05:24:29,506 | INFO     | sum of square deviations: 21528240242.501175
[2025-11-22 00:25:14] 2025-11-22 05:24:29,510 | INFO     | sum of deviations: 207930390921.73706
[2025-11-22 00:25:14] 2025-11-22 05:24:29,510 | INFO     | mean x: 1763776530.2287104
[2025-11-22 00:25:14] 2025-11-22 05:24:29,510 | INFO     | mean y: 3449622.598540146
[2025-11-22 00:25:14] 2025-11-22 05:24:29,510 | INFO     | intersect: -17031976371.255575
[2025-11-22 00:25:14] 2025-11-22 05:24:29,511 | INFO     | chi2: 4.034748239576427
[2025-11-22 00:25:14] 2025-11-22 05:24:29,511 | INFO     | current chi2=4.034748239576427 (change=1.1728398621949752 %)
[2025-11-22 00:25:14] 2025-11-22 05:24:29,511 | INFO     | left removable region: 20
[2025-11-22 00:25:14] 2025-11-22 05:24:29,512 | INFO     | sum of square deviations: 18394076557.797466
[2025-11-22 00:25:14] 2025-11-22 05:24:29,515 | INFO     | sum of deviations: 380963819863.1974
[2025-11-22 00:25:14] 2025-11-22 05:24:29,515 | INFO     | mean x: 1763776499.7358975
[2025-11-22 00:25:14] 2025-11-22 05:24:29,515 | INFO     | mean y: 3499619.535897436
[2025-11-22 00:25:14] 2025-11-22 05:24:29,515 | INFO     | intersect: -36526468634.80879
[2025-11-22 00:25:14] 2025-11-22 05:24:29,516 | INFO     | chi2: 0.06539645932991442
[2025-11-22 00:25:14] 2025-11-22 05:24:29,516 | INFO     | current memory leak: 20.71 B/s (using 390 data points, chi2=0.07)
[2025-11-22 00:25:14] 2025-11-22 05:24:29,516 | INFO     | could have reported an average CPU frequency of 2361 MHz (18 samples)
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | ..............................
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | . Timing measurements:
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | . get job = 0 s
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | . initial setup = 2 s
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | . payload setup = 7 s
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | . stage-in = 0 s
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | . payload execution = 25644 s
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | . stage-out = 3 s
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | . log creation = 0 s
[2025-11-22 00:25:14] 2025-11-22 05:24:29,517 | INFO     | ..............................
[2025-11-22 00:25:14] 2025-11-22 05:24:30,041 | INFO     | 
[2025-11-22 00:25:14] 2025-11-22 05:24:30,042 | INFO     | job summary report
[2025-11-22 00:25:14] 2025-11-22 05:24:30,042 | INFO     | --------------------------------------------------
[2025-11-22 00:25:14] 2025-11-22 05:24:30,042 | INFO     | PanDA job id: 6894239439
[2025-11-22 00:25:14] 2025-11-22 05:24:30,042 | INFO     | task id: 47533967
[2025-11-22 00:25:14] 2025-11-22 05:24:30,042 | INFO     | errors: (none)
[2025-11-22 00:25:14] 2025-11-22 05:24:30,042 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 00:25:14] 2025-11-22 05:24:30,043 | INFO     | pilot state: finished 
[2025-11-22 00:25:14] 2025-11-22 05:24:30,043 | INFO     | transexitcode: 0
[2025-11-22 00:25:14] 2025-11-22 05:24:30,043 | INFO     | exeerrorcode: 0
[2025-11-22 00:25:14] 2025-11-22 05:24:30,043 | INFO     | exeerrordiag: 
[2025-11-22 00:25:14] 2025-11-22 05:24:30,043 | INFO     | exitcode: 0
[2025-11-22 00:25:14] 2025-11-22 05:24:30,043 | INFO     | exitmsg: OK
[2025-11-22 00:25:14] 2025-11-22 05:24:30,044 | INFO     | cpuconsumptiontime: 294326 s
[2025-11-22 00:25:14] 2025-11-22 05:24:30,044 | INFO     | nevents: 1000
[2025-11-22 00:25:14] 2025-11-22 05:24:30,044 | INFO     | neventsw: 0
[2025-11-22 00:25:14] 2025-11-22 05:24:30,044 | INFO     | pid: 7801
[2025-11-22 00:25:14] 2025-11-22 05:24:30,044 | INFO     | pgrp: 7801
[2025-11-22 00:25:14] 2025-11-22 05:24:30,044 | INFO     | corecount: 12
[2025-11-22 00:25:14] 2025-11-22 05:24:30,045 | INFO     | event service: False
[2025-11-22 00:25:14] 2025-11-22 05:24:30,045 | INFO     | sizes: {0: 2298754, 5: 2299016, 11: 2299072, 25655: 2336279, 25659: 2345329, 25667: 2345519}
[2025-11-22 00:25:14] 2025-11-22 05:24:30,045 | INFO     | --------------------------------------------------
[2025-11-22 00:25:14] 2025-11-22 05:24:30,045 | INFO     | 
[2025-11-22 00:25:14] 2025-11-22 05:24:30,045 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 00:25:14] 2025-11-22 05:24:30,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 00:25:14] 2025-11-22 05:24:30,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 00:25:14] 2025-11-22 05:24:30,071 | INFO     | job 6894239439 has completed (purged errors)
[2025-11-22 00:25:14] 2025-11-22 05:24:30,071 | INFO     | overall cleanup function is called
[2025-11-22 00:25:14] 2025-11-22 05:24:31,088 | INFO     | --- collectZombieJob: --- 10, [7801]
[2025-11-22 00:25:14] 2025-11-22 05:24:31,088 | INFO     | zombie collector waiting for pid 7801
[2025-11-22 00:25:14] 2025-11-22 05:24:31,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 00:25:14] 2025-11-22 05:24:31,088 | INFO     | collected zombie processes
[2025-11-22 00:25:14] 2025-11-22 05:24:31,088 | INFO     | will attempt to kill all subprocesses of pid=7801
[2025-11-22 00:25:14] 2025-11-22 05:24:31,181 | INFO     | process IDs to be killed: [7801] (in reverse order)
[2025-11-22 00:25:14] 2025-11-22 05:24:31,229 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 00:25:14] 2025-11-22 05:24:31,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 00:25:14] 2025-11-22 05:24:31,233 | INFO     | did not find any defunct processes belonging to 7801
[2025-11-22 00:25:14] 2025-11-22 05:24:31,237 | INFO     | did not find any defunct processes belonging to 7801
[2025-11-22 00:25:14] 2025-11-22 05:24:31,239 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 00:25:14] 2025-11-22 05:24:31,239 | INFO     | ready for new job
[2025-11-22 00:25:14] 2025-11-22 05:24:31,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 00:25:14] 2025-11-22 05:24:31,241 | INFO     | ***************************************
[2025-11-22 00:25:14] 2025-11-22 05:24:31,241 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 00:25:14] 2025-11-22 05:24:31,241 | INFO     | ***************************************
[2025-11-22 00:25:14] 2025-11-22 05:24:31,242 | INFO     | 
[2025-11-22 00:25:14] 2025-11-22 05:24:31,242 | INFO     | architecture information:
[2025-11-22 00:25:14] 2025-11-22 05:24:31,243 | INFO     | executing command: cat /etc/os-release
[2025-11-22 00:25:14] 2025-11-22 05:24:31,260 | INFO     | cat /etc/os-release:
[2025-11-22 00:25:14] NAME="CentOS Linux"
[2025-11-22 00:25:14] VERSION="7 (Core)"
[2025-11-22 00:25:14] ID="centos"
[2025-11-22 00:25:14] ID_LIKE="rhel fedora"
[2025-11-22 00:25:14] VERSION_ID="7"
[2025-11-22 00:25:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 00:25:14] ANSI_COLOR="0;31"
[2025-11-22 00:25:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 00:25:14] HOME_URL="https://www.centos.org/"
[2025-11-22 00:25:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 00:25:14] 
[2025-11-22 00:25:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 00:25:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 00:25:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 00:25:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 00:25:14] 
[2025-11-22 00:25:14] 2025-11-22 05:24:31,260 | INFO     | ***************************************
[2025-11-22 00:25:14] 2025-11-22 05:24:31,763 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 00:25:14] 2025-11-22 05:24:31,780 | INFO     | sufficient remaining disk space (28252831744 B)
[2025-11-22 00:25:14] 2025-11-22 05:24:31,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 00:25:14] 2025-11-22 05:24:31,781 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 00:25:14] 2025-11-22 05:24:31,781 | INFO     | update_server=False
[2025-11-22 00:25:14] 2025-11-22 05:24:31,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 00:25:14] 2025-11-22 05:24:31,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:25:14] 2025-11-22 05:24:31,782 | INFO     | aborting loop
[2025-11-22 00:25:14] 2025-11-22 05:24:32,245 | INFO     | all job control threads have been joined
[2025-11-22 00:25:14] 2025-11-22 05:24:32,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 00:25:14] 2025-11-22 05:24:32,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 00:25:14] 2025-11-22 05:24:32,645 | INFO     | all payload control threads have been joined
[2025-11-22 00:25:14] 2025-11-22 05:24:32,710 | INFO     | all data control threads have been joined
[2025-11-22 00:25:14] 2025-11-22 05:24:32,785 | INFO     | [job] retrieve thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:32,789 | INFO     | [job] job monitor thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:32,847 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:32,864 | INFO     | [job] validate thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:32,917 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:33,091 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:33,115 | INFO     | [payload] failed_post thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:33,250 | INFO     | [job] control thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:33,650 | INFO     | [payload] control thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:33,716 | INFO     | [data] control thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:33,800 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:33,828 | INFO     | [payload] validate_post thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:33,918 | INFO     | [data] copytool_in thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:34,454 | INFO     | [data] copytool_out thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:34,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:25:14] 2025-11-22 05:24:35,613 | INFO     | [job] queue monitor thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:24:36,531 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 00:25:14] 2025-11-22 05:25:01,997 | INFO     | PID=1265 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 00:25:14] 2025-11-22 05:25:01,998 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 00:25:14] 2025-11-22 05:25:01,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 00:25:14] 2025-11-22 05:25:01,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 00:25:14] 2025-11-22 05:25:08,302 | INFO     | [monitor] cgroup control has ended
[2025-11-22 00:25:14] 2025-11-22 05:25:08,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671552390976)>', '<ExcThread(monitor, started 139670985893632)>']
[2025-11-22 00:25:14] 2025-11-22 05:25:09,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 00:25:14] 2025-11-22 05:25:09,032 | INFO     | [monitor] control thread has ended
[2025-11-22 00:25:14] 2025-11-22 05:25:13,899 | INFO     | all workflow threads have been joined
[2025-11-22 00:25:14] 2025-11-22 05:25:13,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 00:25:14] 2025-11-22 05:25:13,900 | INFO     | traces error code: 0
[2025-11-22 00:25:14] 2025-11-22 05:25:13,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 00:25:14] 2025-11-22 05:25:13,990 [wrapper] ==== pilot stdout END ====
[2025-11-22 00:25:14] 2025-11-22 05:25:13,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 00:25:14] 2025-11-22 05:25:13,997 [wrapper] pilotpid: 1265
[2025-11-22 00:25:14] 2025-11-22 05:25:14,001 [wrapper] Pilot exit status: 0
[2025-11-22 00:25:14] 2025-11-22 05:25:14,014 [wrapper] pandaids: 6894239439
[2025-11-22 00:25:14] 2025-11-22 05:25:14,060 [wrapper] cleanup supervisor_pilot 29382 1266
[2025-11-22 00:25:14] 2025-11-22 05:25:14,064 [wrapper] Test setup, not cleaning
[2025-11-22 00:25:14] 2025-11-22 05:25:14,068 [wrapper] apfmon messages muted
[2025-11-22 00:25:14] 2025-11-22 05:25:14,072 [wrapper] ==== wrapper stdout END ====
[2025-11-22 00:25:14] 2025-11-22 05:25:14,076 [wrapper] ==== wrapper stderr END ====
[2025-11-22 00:25:14]  *** Error codes and diagnostics ***
[2025-11-22 00:25:14]     "exeErrorCode": 0,
[2025-11-22 00:25:14]     "exeErrorDiag": "",
[2025-11-22 00:25:14]     "pilotErrorCode": 0,
[2025-11-22 00:25:14]     "pilotErrorDiag": "",
[2025-11-22 00:25:14]  *** Listing of results directory ***
[2025-11-22 00:25:14] total 1310332
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 19:06 pilot3.tar.gz
[2025-11-22 00:25:14] -rwx------ 1 boincer umatlas     36292 Nov 20 19:40 runpilot2-wrapper.sh
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 19:40 queuedata.json
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas       100 Nov 21 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 00:25:14] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 17:16 run_atlas
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas       105 Nov 21 17:16 job.xml
[2025-11-22 00:25:14] -rw-r--r-- 2 boincer umatlas 408876819 Nov 21 17:16 EVNT.47493127._002053.pool.root.1
[2025-11-22 00:25:14] -rw-r--r-- 2 boincer umatlas    590095 Nov 21 17:16 input.tar.gz
[2025-11-22 00:25:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 17:16 start_atlas.sh
[2025-11-22 00:25:14] drwxrwx--x 2 boincer umatlas      4096 Nov 21 17:16 shared
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas         0 Nov 21 17:16 boinc_lockfile
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas      2784 Nov 21 17:16 pandaJob.out
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas        57 Nov 21 17:16 setup.sh.local
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas    989798 Nov 21 17:16 agis_schedconf.cvmfs.json
[2025-11-22 00:25:14] drwx------ 5 boincer umatlas      4096 Nov 21 17:16 pilot3
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas       533 Nov 22 00:15 boinc_task_state.xml
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 00:20 init_data.xml
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas 917456922 Nov 22 00:23 HITS.47533967._000242.pool.root.1
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas      1065 Nov 22 00:24 memory_monitor_summary.json
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas   1526164 Nov 22 00:24 agis_ddmendpoints.agis.ALL.json
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas   2171467 Nov 22 00:24 log.47533967._000242.job.log.tgz.1
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas      8666 Nov 22 00:24 heartbeat.json
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas        95 Nov 22 00:24 pilot_heartbeat.json
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 00:25 boinc_mmap_file
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas        29 Nov 22 00:25 wrapper_checkpoint.txt
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas      4745 Nov 22 00:25 pilotlog.txt
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas   3588733 Nov 22 00:25 log.47533967._000242.job.log.1
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas       353 Nov 22 00:25 output.list
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas       620 Nov 22 00:25 runtime_log
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas   5775360 Nov 22 00:25 result.tar.gz
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 00:25 runtime_log.err
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas       670 Nov 22 00:25 5HFNDmDNUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSkIKDm0TCGon.diag
[2025-11-22 00:25:14] -rw-r--r-- 1 boincer umatlas     21287 Nov 22 00:25 stderr.txt
[2025-11-22 00:25:14] HITS file was successfully produced:
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas 917456922 Nov 22 00:23 shared/HITS.pool.root.1
[2025-11-22 00:25:14]  *** Contents of shared directory: ***
[2025-11-22 00:25:14] total 1301496
[2025-11-22 00:25:14] -rw-r--r-- 2 boincer umatlas 408876819 Nov 21 17:16 ATLAS.root_0
[2025-11-22 00:25:14] -rw-r--r-- 2 boincer umatlas    590095 Nov 21 17:16 input.tar.gz
[2025-11-22 00:25:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 17:16 start_atlas.sh
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas 917456922 Nov 22 00:23 HITS.pool.root.1
[2025-11-22 00:25:14] -rw------- 1 boincer umatlas   5775360 Nov 22 00:25 result.tar.gz
00:25:15 (30034): run_atlas exited; CPU time 287668.899154
00:25:15 (30034): called boinc_finish(0)

</stderr_txt>
]]>

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