Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:49:18 (697807): wrapper (7.7.26015): starting
22:49:18 (697807): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 22:49:18] Arguments: --nthreads 4
[2025-11-24 22:49:18] Threads: 4
[2025-11-24 22:49:18] Checking for CVMFS
[2025-11-24 22:49:18] No cvmfs_config command found, will try listing directly
[2025-11-24 22:49:18] CVMFS is ok
[2025-11-24 22:49:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:49:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:49:18] Further information can be found at the LHC@home message board.
[2025-11-24 22:49:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:49:18] Checking for apptainer binary...
[2025-11-24 22:49:18] which: no apptainer in ((null))
[2025-11-24 22:49:18] apptainer is not installed, using version from CVMFS
[2025-11-24 22:49:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:49:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-24 22:49:18] apptainer works
[2025-11-24 22:49:18] Set ATHENA_PROC_NUMBER=4
[2025-11-24 22:49:18] Set ATHENA_CORE_NUMBER=4
[2025-11-24 22:49:18] Starting ATLAS job with PandaID=6894267706
[2025-11-24 22:49:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:51:47]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:51:47] 2025-11-25 14:50:05,622 | INFO     | monitor loop #4386: job 0:6894267706 is in state 'finished'
[2025-11-25 15:51:47] 2025-11-25 14:50:05,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:51:47] 2025-11-25 14:50:06,666 | INFO     | time since job start (61238s) is within the limit (172800.0s)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,375 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 15:51:47] 2025-11-25 14:50:07,385 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2693.542374999999
[2025-11-25 15:51:47] 2025-11-25 14:50:07,397 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6894267706/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,398 | INFO     | extracted standard info from prmon json
[2025-11-25 15:51:47] 2025-11-25 14:50:07,398 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:51:47] 2025-11-25 14:50:07,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:51:47] 2025-11-25 14:50:07,415 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:51:47] 2025-11-25 14:50:07,416 | INFO     | sum of square deviations: 313819274968.91907
[2025-11-25 15:51:47] 2025-11-25 14:50:07,436 | INFO     | sum of deviations: 833992922522.888
[2025-11-25 15:51:47] 2025-11-25 14:50:07,436 | INFO     | mean x: 1764051586.508964
[2025-11-25 15:51:47] 2025-11-25 14:50:07,436 | INFO     | mean y: 2286899.84561753
[2025-11-25 15:51:47] 2025-11-25 14:50:07,436 | INFO     | intersect: -4685782493.786936
[2025-11-25 15:51:47] 2025-11-25 14:50:07,438 | INFO     | chi2: 4.691471160014088
[2025-11-25 15:51:47] 2025-11-25 14:50:07,439 | INFO     | sum of square deviations: 309154055358.919
[2025-11-25 15:51:47] 2025-11-25 14:50:07,459 | INFO     | sum of deviations: 1089538670747.1713
[2025-11-25 15:51:47] 2025-11-25 14:50:07,460 | INFO     | mean x: 1764051434.0090091
[2025-11-25 15:51:47] 2025-11-25 14:50:07,460 | INFO     | mean y: 2295253.092092092
[2025-11-25 15:51:47] 2025-11-25 14:50:07,460 | INFO     | intersect: -6214677227.855723
[2025-11-25 15:51:47] 2025-11-25 14:50:07,461 | INFO     | chi2: 1.8534836996397386
[2025-11-25 15:51:47] 2025-11-25 14:50:07,461 | INFO     | current chi2=1.8534836996397386 (change=60.49248441646239 %)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,462 | INFO     | sum of square deviations: 304535301736.4184
[2025-11-25 15:51:47] 2025-11-25 14:50:07,481 | INFO     | sum of deviations: 1110190918092.0063
[2025-11-25 15:51:47] 2025-11-25 14:50:07,482 | INFO     | mean x: 1764051281.5090544
[2025-11-25 15:51:47] 2025-11-25 14:50:07,482 | INFO     | mean y: 2295931.665995976
[2025-11-25 15:51:47] 2025-11-25 14:50:07,482 | INFO     | intersect: -6428596318.306989
[2025-11-25 15:51:47] 2025-11-25 14:50:07,483 | INFO     | chi2: 1.754338316217501
[2025-11-25 15:51:47] 2025-11-25 14:50:07,483 | INFO     | current chi2=1.754338316217501 (change=5.349137056965132 %)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,483 | INFO     | right removable region: 993
[2025-11-25 15:51:47] 2025-11-25 14:50:07,485 | INFO     | sum of square deviations: 309154049868.919
[2025-11-25 15:51:47] 2025-11-25 14:50:07,504 | INFO     | sum of deviations: 661450097245.1168
[2025-11-25 15:51:47] 2025-11-25 14:50:07,504 | INFO     | mean x: 1764051739.0090091
[2025-11-25 15:51:47] 2025-11-25 14:50:07,504 | INFO     | mean y: 2292530.0980980983
[2025-11-25 15:51:47] 2025-11-25 14:50:07,504 | INFO     | intersect: -3771981799.504448
[2025-11-25 15:51:47] 2025-11-25 14:50:07,505 | INFO     | chi2: 3.0452364261492924
[2025-11-25 15:51:47] 2025-11-25 14:50:07,506 | INFO     | current chi2=3.0452364261492924 (change=35.08994679314734 %)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,507 | INFO     | sum of square deviations: 304535290756.4185
[2025-11-25 15:51:47] 2025-11-25 14:50:07,526 | INFO     | sum of deviations: 647957019906.1327
[2025-11-25 15:51:47] 2025-11-25 14:50:07,526 | INFO     | mean x: 1764051891.5090544
[2025-11-25 15:51:47] 2025-11-25 14:50:07,526 | INFO     | mean y: 2292975.1519114687
[2025-11-25 15:51:47] 2025-11-25 14:50:07,526 | INFO     | intersect: -3751064488.7494783
[2025-11-25 15:51:47] 2025-11-25 14:50:07,528 | INFO     | chi2: 3.0441351276111446
[2025-11-25 15:51:47] 2025-11-25 14:50:07,528 | INFO     | current chi2=3.0441351276111446 (change=0.036164631707770914 %)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,528 | INFO     | left removable region: 20
[2025-11-25 15:51:47] 2025-11-25 14:50:07,529 | INFO     | sum of square deviations: 285638674674.91614
[2025-11-25 15:51:47] 2025-11-25 14:50:07,547 | INFO     | sum of deviations: 915950845910.3129
[2025-11-25 15:51:47] 2025-11-25 14:50:07,548 | INFO     | mean x: 1764051861.0092497
[2025-11-25 15:51:47] 2025-11-25 14:50:07,548 | INFO     | mean y: 2302203.7430626927
[2025-11-25 15:51:47] 2025-11-25 14:50:07,548 | INFO     | intersect: -5654441569.347189
[2025-11-25 15:51:47] 2025-11-25 14:50:07,549 | INFO     | chi2: 0.07863473735081537
[2025-11-25 15:51:47] 2025-11-25 14:50:07,549 | INFO     | current memory leak: 3.21 B/s (using 973 data points, chi2=0.08)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,550 | INFO     | could have reported an average CPU frequency of 2661 MHz (37 samples)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | ..............................
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | . Timing measurements:
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | . get job = 0 s
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | . initial setup = 1 s
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | . payload setup = 6 s
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | . stage-in = 0 s
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | . payload execution = 61203 s
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | . stage-out = 2 s
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | . log creation = 0 s
[2025-11-25 15:51:47] 2025-11-25 14:50:07,551 | INFO     | ..............................
[2025-11-25 15:51:47] 2025-11-25 14:50:07,683 | INFO     | 
[2025-11-25 15:51:47] 2025-11-25 14:50:07,683 | INFO     | job summary report
[2025-11-25 15:51:47] 2025-11-25 14:50:07,683 | INFO     | --------------------------------------------------
[2025-11-25 15:51:47] 2025-11-25 14:50:07,683 | INFO     | PanDA job id: 6894267706
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | task id: 47533967
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | errors: (none)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | pilot state: finished 
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | transexitcode: 0
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | exeerrorcode: 0
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | exeerrordiag: 
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | exitcode: 0
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | exitmsg: OK
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | cpuconsumptiontime: 242073 s
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | nevents: 1000
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | neventsw: 0
[2025-11-25 15:51:47] 2025-11-25 14:50:07,684 | INFO     | pid: 708477
[2025-11-25 15:51:47] 2025-11-25 14:50:07,685 | INFO     | pgrp: 708477
[2025-11-25 15:51:47] 2025-11-25 14:50:07,685 | INFO     | corecount: 4
[2025-11-25 15:51:47] 2025-11-25 14:50:07,685 | INFO     | event service: False
[2025-11-25 15:51:47] 2025-11-25 14:50:07,685 | INFO     | sizes: {0: 2284150, 1: 2284349, 5: 2284611, 11: 2284667, 61212: 2337263, 61215: 2346284, 61218: 2346468, 61223: 2346714}
[2025-11-25 15:51:47] 2025-11-25 14:50:07,685 | INFO     | --------------------------------------------------
[2025-11-25 15:51:47] 2025-11-25 14:50:07,685 | INFO     | 
[2025-11-25 15:51:47] 2025-11-25 14:50:07,685 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-11-25 15:51:47] 2025-11-25 14:50:07,709 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,710 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,712 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:51:47] 2025-11-25 14:50:07,712 | INFO     | job 6894267706 has completed (purged errors)
[2025-11-25 15:51:47] 2025-11-25 14:50:07,712 | INFO     | overall cleanup function is called
[2025-11-25 15:51:47] 2025-11-25 14:50:08,726 | INFO     | --- collectZombieJob: --- 10, [708477]
[2025-11-25 15:51:47] 2025-11-25 14:50:08,726 | INFO     | zombie collector waiting for pid 708477
[2025-11-25 15:51:47] 2025-11-25 14:50:08,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:51:47] 2025-11-25 14:50:08,726 | INFO     | collected zombie processes
[2025-11-25 15:51:47] 2025-11-25 14:50:08,726 | INFO     | will attempt to kill all subprocesses of pid=708477
[2025-11-25 15:51:47] 2025-11-25 14:50:09,139 | INFO     | process IDs to be killed: [708477] (in reverse order)
[2025-11-25 15:51:47] 2025-11-25 14:50:09,266 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:51:47] 2025-11-25 14:50:09,267 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:51:47] 2025-11-25 14:50:09,282 | INFO     | did not find any defunct processes belonging to 708477
[2025-11-25 15:51:47] 2025-11-25 14:50:09,296 | INFO     | did not find any defunct processes belonging to 708477
[2025-11-25 15:51:47] 2025-11-25 14:50:09,297 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:51:47] 2025-11-25 14:50:09,298 | INFO     | ready for new job
[2025-11-25 15:51:47] 2025-11-25 14:50:09,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:51:47] 2025-11-25 14:50:09,303 | INFO     | ***************************************
[2025-11-25 15:51:47] 2025-11-25 14:50:09,304 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:51:47] 2025-11-25 14:50:09,304 | INFO     | ***************************************
[2025-11-25 15:51:47] 2025-11-25 14:50:09,304 | INFO     | 
[2025-11-25 15:51:47] 2025-11-25 14:50:09,308 | INFO     | architecture information:
[2025-11-25 15:51:47] 2025-11-25 14:50:09,309 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:51:47] 2025-11-25 14:50:09,326 | INFO     | cat /etc/os-release:
[2025-11-25 15:51:47] NAME="CentOS Linux"
[2025-11-25 15:51:47] VERSION="7 (Core)"
[2025-11-25 15:51:47] ID="centos"
[2025-11-25 15:51:47] ID_LIKE="rhel fedora"
[2025-11-25 15:51:47] VERSION_ID="7"
[2025-11-25 15:51:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:51:47] ANSI_COLOR="0;31"
[2025-11-25 15:51:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:51:47] HOME_URL="https://www.centos.org/"
[2025-11-25 15:51:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:51:47] 
[2025-11-25 15:51:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:51:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:51:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:51:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:51:47] 
[2025-11-25 15:51:47] 2025-11-25 14:50:09,326 | INFO     | ***************************************
[2025-11-25 15:51:47] 2025-11-25 14:50:09,829 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-11-25 15:51:47] 2025-11-25 14:50:09,847 | INFO     | sufficient remaining disk space (662707372032 B)
[2025-11-25 15:51:47] 2025-11-25 14:50:09,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:51:47] 2025-11-25 14:50:09,848 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:51:47] 2025-11-25 14:50:09,848 | INFO     | update_server=False
[2025-11-25 15:51:47] 2025-11-25 14:50:09,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:51:47] 2025-11-25 14:50:09,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:51:47] 2025-11-25 14:50:09,848 | INFO     | aborting loop
[2025-11-25 15:51:47] 2025-11-25 14:50:10,012 | INFO     | all data control threads have been joined
[2025-11-25 15:51:47] 2025-11-25 14:50:10,059 | INFO     | all job control threads have been joined
[2025-11-25 15:51:47] 2025-11-25 14:50:10,250 | INFO     | all payload control threads have been joined
[2025-11-25 15:51:47] 2025-11-25 14:50:10,853 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:10,853 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:10,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:51:47] 2025-11-25 14:50:11,017 | INFO     | [data] control thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:11,064 | INFO     | [job] control thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:11,134 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:11,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:11,255 | INFO     | [payload] control thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:11,318 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:11,392 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:11,439 | INFO     | [job] validate thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:11,688 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:12,343 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:12,453 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:12,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:51:47] 2025-11-25 14:50:12,886 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:13,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:51:47] 2025-11-25 14:50:13,657 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:17,008 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:51:47] 2025-11-25 14:50:40,272 | INFO     | PID=701576 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 15:51:47] 2025-11-25 14:50:40,272 | INFO     | .. there are 4 such processes running
[2025-11-25 15:51:47] 2025-11-25 14:50:40,273 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:51:47] 2025-11-25 14:50:40,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:51:47] 2025-11-25 14:50:40,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:51:47] 2025-11-25 14:51:09,154 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:51:47] 2025-11-25 14:51:09,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22634689984320)>', '<ExcThread(monitor, started 22634450351872)>']
[2025-11-25 15:51:47] 2025-11-25 14:51:09,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:51:47] 2025-11-25 14:51:09,416 | INFO     | [monitor] control thread has ended
[2025-11-25 15:51:47] 2025-11-25 14:51:14,276 | INFO     | all workflow threads have been joined
[2025-11-25 15:51:47] 2025-11-25 14:51:14,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:51:47] 2025-11-25 14:51:14,277 | INFO     | traces error code: 0
[2025-11-25 15:51:47] 2025-11-25 14:51:14,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:51:47] 2025-11-25 14:51:14,463 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:51:47] 2025-11-25 14:51:14,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:51:47] 2025-11-25 14:51:14,470 [wrapper] pilotpid: 701576
[2025-11-25 15:51:47] 2025-11-25 14:51:14,473 [wrapper] Pilot exit status: 0
[2025-11-25 15:51:47] 2025-11-25 14:51:14,485 [wrapper] pandaids: 6894267706
[2025-11-25 15:51:47] 2025-11-25 14:51:14,566 [wrapper] cleanup supervisor_pilot 1513781 701577
[2025-11-25 15:51:47] 2025-11-25 14:51:14,569 [wrapper] Test setup, not cleaning
[2025-11-25 15:51:47] 2025-11-25 14:51:14,572 [wrapper] apfmon messages muted
[2025-11-25 15:51:47] 2025-11-25 14:51:14,575 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:51:47] 2025-11-25 14:51:14,579 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:51:47]  *** Error codes and diagnostics ***
[2025-11-25 15:51:47]     "exeErrorCode": 0,
[2025-11-25 15:51:47]     "exeErrorDiag": "",
[2025-11-25 15:51:47]     "pilotErrorCode": 0,
[2025-11-25 15:51:47]     "pilotErrorDiag": "",
[2025-11-25 15:51:47]  *** Listing of results directory ***
[2025-11-25 15:51:47] total 1322960
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:26 queuedata.json
[2025-11-25 15:51:47] -rwx------ 1 boinc boinc     36292 Nov 21 06:28 runpilot2-wrapper.sh
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc       100 Nov 24 22:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:51:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 22:49 run_atlas
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc       105 Nov 24 22:49 job.xml
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc      6635 Nov 24 22:49 init_data.xml
[2025-11-25 15:51:47] -rw-r--r-- 2 boinc boinc 410007877 Nov 24 22:49 EVNT.47493127._002248.pool.root.1
[2025-11-25 15:51:47] -rw-r--r-- 2 boinc boinc     15847 Nov 24 22:49 start_atlas.sh
[2025-11-25 15:51:47] drwxrwx--x 2 boinc boinc      4096 Nov 24 22:49 shared
[2025-11-25 15:51:47] -rw-r--r-- 2 boinc boinc    590101 Nov 24 22:49 input.tar.gz
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc         0 Nov 24 22:49 boinc_lockfile
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc      2786 Nov 24 22:49 pandaJob.out
[2025-11-25 15:51:47] -rw------- 1 boinc boinc    991801 Nov 24 22:49 agis_schedconf.cvmfs.json
[2025-11-25 15:51:47] drwx------ 5 boinc boinc      4096 Nov 24 22:49 pilot3
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc       532 Nov 25 15:42 boinc_task_state.xml
[2025-11-25 15:51:47] -rw------- 1 boinc boinc 920201599 Nov 25 15:49 HITS.47533967._002197.pool.root.1
[2025-11-25 15:51:47] -rw------- 1 boinc boinc      1046 Nov 25 15:49 memory_monitor_summary.json
[2025-11-25 15:51:47] -rw------- 1 boinc boinc   1516240 Nov 25 15:49 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:51:47] -rw------- 1 boinc boinc   1737966 Nov 25 15:50 log.47533967._002197.job.log.tgz.1
[2025-11-25 15:51:47] -rw------- 1 boinc boinc      8630 Nov 25 15:50 heartbeat.json
[2025-11-25 15:51:47] -rw------- 1 boinc boinc        95 Nov 25 15:50 pilot_heartbeat.json
[2025-11-25 15:51:47] -rw------- 1 boinc boinc      4832 Nov 25 15:51 pilotlog.txt
[2025-11-25 15:51:47] -rw------- 1 boinc boinc   8551861 Nov 25 15:51 log.47533967._002197.job.log.1
[2025-11-25 15:51:47] -rw------- 1 boinc boinc       353 Nov 25 15:51 output.list
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc       620 Nov 25 15:51 runtime_log
[2025-11-25 15:51:47] -rw------- 1 boinc boinc  10311680 Nov 25 15:51 result.tar.gz
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc      9206 Nov 25 15:51 runtime_log.err
[2025-11-25 15:51:47] -rw------- 1 boinc boinc       670 Nov 25 15:51 ByhMDmGsYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm46IKDmdVNT2m.diag
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc        28 Nov 25 15:51 wrapper_checkpoint.txt
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc      8192 Nov 25 15:51 boinc_mmap_file
[2025-11-25 15:51:47] -rw-r--r-- 1 boinc boinc     21108 Nov 25 15:51 stderr.txt
[2025-11-25 15:51:47] HITS file was successfully produced:
[2025-11-25 15:51:47] -rw------- 1 boinc boinc 920201599 Nov 25 15:49 shared/HITS.pool.root.1
[2025-11-25 15:51:47]  *** Contents of shared directory: ***
[2025-11-25 15:51:47] total 1309712
[2025-11-25 15:51:47] -rw-r--r-- 2 boinc boinc 410007877 Nov 24 22:49 ATLAS.root_0
[2025-11-25 15:51:47] -rw-r--r-- 2 boinc boinc     15847 Nov 24 22:49 start_atlas.sh
[2025-11-25 15:51:47] -rw-r--r-- 2 boinc boinc    590101 Nov 24 22:49 input.tar.gz
[2025-11-25 15:51:47] -rw------- 1 boinc boinc 920201599 Nov 25 15:49 HITS.pool.root.1
[2025-11-25 15:51:47] -rw------- 1 boinc boinc  10311680 Nov 25 15:51 result.tar.gz
15:51:49 (697807): run_atlas exited; CPU time 244378.949742
15:51:49 (697807): called boinc_finish(0)

</stderr_txt>
]]>

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