Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:42:07 (3886790): wrapper (7.7.26015): starting
22:42:07 (3886790): wrapper: running run_atlas (--nthreads 3)
[2025-11-21 22:42:07] Arguments: --nthreads 3
[2025-11-21 22:42:07] Threads: 3
[2025-11-21 22:42:07] Checking for CVMFS
[2025-11-21 22:42:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:42:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:42:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:42:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:42:08] 2.9.2.0 3761160 26 52500 153143 1 88 34560578 36864001 0 130560 0 375646 100.000 1295 9736 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 22:42:08] CVMFS is ok
[2025-11-21 22:42:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 22:42:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 22:42:08] Further information can be found at the LHC@home message board.
[2025-11-21 22:42:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:42:08] Checking for apptainer binary...
[2025-11-21 22:42:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:42:08] Running /usr/bin/apptainer --version
[2025-11-21 22:42:08] apptainer version 1.4.1-1.1
[2025-11-21 22:42:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:42:08] thA335
[2025-11-21 22:42:08] apptainer works
[2025-11-21 22:42:08] Set ATHENA_PROC_NUMBER=3
[2025-11-21 22:42:08] Set ATHENA_CORE_NUMBER=3
[2025-11-21 22:42:08] Starting ATLAS job with PandaID=6891570653
[2025-11-21 22:42:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:46:26]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:46:26] 2025-11-21 21:45:39,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:46:26] 2025-11-21 21:45:39,122 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:46:26] 2025-11-21 21:45:39,122 | INFO     | update_server=False
[2025-11-21 22:46:26] 2025-11-21 21:45:39,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:46:26] 2025-11-21 21:45:39,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:46:26] 2025-11-21 21:45:39,122 | INFO     | aborting loop
[2025-11-21 22:46:26] 2025-11-21 21:45:39,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:46:26] 2025-11-21 21:45:39,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:46:26] 2025-11-21 21:45:39,545 | INFO     | all job control threads have been joined
[2025-11-21 22:46:26] 2025-11-21 21:45:39,648 | INFO     | all data control threads have been joined
[2025-11-21 22:46:26] 2025-11-21 21:45:40,106 | INFO     | all payload control threads have been joined
[2025-11-21 22:46:26] 2025-11-21 21:45:40,128 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:40,129 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:40,129 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:40,551 | INFO     | [job] control thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:40,610 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:40,654 | INFO     | [data] control thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:40,808 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:40,959 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:41,050 | INFO     | [job] validate thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:41,112 | INFO     | [payload] control thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:41,127 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:41,198 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:41,403 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:41,487 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:41,494 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:45:41,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:46:26] 2025-11-21 21:45:45,709 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:46:26] 2025-11-21 21:46:08,755 | INFO     | PID=3890523 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 22:46:26] 2025-11-21 21:46:08,755 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:46:26] 2025-11-21 21:46:08,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:46:26] 2025-11-21 21:46:08,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:46:26] 2025-11-21 21:46:19,835 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:46:26] 2025-11-21 21:46:21,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226223114048)>', '<ExcThread(monitor, started 140225867126528)>']
[2025-11-21 22:46:26] 2025-11-21 21:46:21,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:46:26] 2025-11-21 21:46:21,825 | INFO     | [monitor] control thread has ended
[2025-11-21 22:46:26] 2025-11-21 21:46:26,591 | INFO     | all workflow threads have been joined
[2025-11-21 22:46:26] 2025-11-21 21:46:26,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:46:26] 2025-11-21 21:46:26,592 | INFO     | traces error code: 0
[2025-11-21 22:46:26] 2025-11-21 21:46:26,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:46:26] 2025-11-21 21:46:26,641 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:46:26] 2025-11-21 21:46:26,645 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:46:26] 2025-11-21 21:46:26,648 [wrapper] pilotpid: 3890523
[2025-11-21 22:46:26] 2025-11-21 21:46:26,651 [wrapper] Pilot exit status: 0
[2025-11-21 22:46:26] 2025-11-21 21:46:26,658 [wrapper] pandaids: 6891570653
[2025-11-21 22:46:26] 2025-11-21 21:46:26,675 [wrapper] cleanup supervisor_pilot 3890529 3890524
[2025-11-21 22:46:26] 2025-11-21 21:46:26,677 [wrapper] Test setup, not cleaning
[2025-11-21 22:46:26] 2025-11-21 21:46:26,680 [wrapper] apfmon messages muted
[2025-11-21 22:46:26] 2025-11-21 21:46:26,682 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:46:26] 2025-11-21 21:46:26,685 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:46:26]  *** Error codes and diagnostics ***
[2025-11-21 22:46:26]     "exeErrorCode": 65,
[2025-11-21 22:46:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 22:46:26]     "pilotErrorCode": 1305,
[2025-11-21 22:46:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 22:46:26]  *** Listing of results directory ***
[2025-11-21 22:46:26] total 403740
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:39 queuedata.json
[2025-11-21 22:46:26] -rwx------ 1 boinc boinc     36292 Nov 18 16:40 runpilot2-wrapper.sh
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc       100 Nov 21 22:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:46:26] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 22:42 run_atlas
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc       105 Nov 21 22:42 job.xml
[2025-11-21 22:46:26] -rw-r--r-- 2 boinc boinc 409237298 Nov 21 22:42 EVNT.47493065._000245.pool.root.1
[2025-11-21 22:46:26] -rw-r--r-- 2 boinc boinc    590100 Nov 21 22:42 input.tar.gz
[2025-11-21 22:46:26] -rw-r--r-- 2 boinc boinc     15120 Nov 21 22:42 start_atlas.sh
[2025-11-21 22:46:26] drwxrwx--x 2 boinc boinc      4096 Nov 21 22:42 shared
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc         0 Nov 21 22:42 boinc_setup_complete
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc      6194 Nov 21 22:42 init_data.xml
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc         0 Nov 21 22:42 boinc_lockfile
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc      2773 Nov 21 22:42 pandaJob.out
[2025-11-21 22:46:26] -rw------- 1 boinc boinc    989798 Nov 21 22:42 agis_schedconf.cvmfs.json
[2025-11-21 22:46:26] -rw------- 1 boinc boinc   1526164 Nov 21 22:42 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:46:26] drwx------ 5 boinc boinc      4096 Nov 21 22:42 pilot3
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc       523 Nov 21 22:43 boinc_task_state.xml
[2025-11-21 22:46:26] -rw------- 1 boinc boinc       962 Nov 21 22:43 memory_monitor_summary.json
[2025-11-21 22:46:26] -rw------- 1 boinc boinc     54409 Nov 21 22:43 log.47493068._002445.job.log.tgz.1
[2025-11-21 22:46:26] -rw------- 1 boinc boinc        95 Nov 21 22:45 pilot_heartbeat.json
[2025-11-21 22:46:26] -rw------- 1 boinc boinc      8416 Nov 21 22:45 heartbeat.json
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc      8192 Nov 21 22:46 boinc_mmap_file
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc        23 Nov 21 22:46 wrapper_checkpoint.txt
[2025-11-21 22:46:26] -rw------- 1 boinc boinc      4752 Nov 21 22:46 pilotlog.txt
[2025-11-21 22:46:26] -rw------- 1 boinc boinc     93666 Nov 21 22:46 log.47493068._002445.job.log.1
[2025-11-21 22:46:26] -rw------- 1 boinc boinc       186 Nov 21 22:46 output.list
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc       620 Nov 21 22:46 runtime_log
[2025-11-21 22:46:26] -rw------- 1 boinc boinc    163840 Nov 21 22:46 result.tar.gz
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc      8624 Nov 21 22:46 runtime_log.err
[2025-11-21 22:46:26] -rw------- 1 boinc boinc       649 Nov 21 22:46 kxJODmjzcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnNFKDmuu73lm.diag
[2025-11-21 22:46:26] -rw-r--r-- 1 boinc boinc      8016 Nov 21 22:46 stderr.txt
[2025-11-21 22:46:26] No HITS result produced
[2025-11-21 22:46:26]  *** Contents of shared directory: ***
[2025-11-21 22:46:26] total 400408
[2025-11-21 22:46:26] -rw-r--r-- 2 boinc boinc 409237298 Nov 21 22:42 ATLAS.root_0
[2025-11-21 22:46:26] -rw-r--r-- 2 boinc boinc    590100 Nov 21 22:42 input.tar.gz
[2025-11-21 22:46:26] -rw-r--r-- 2 boinc boinc     15120 Nov 21 22:42 start_atlas.sh
[2025-11-21 22:46:26] -rw------- 1 boinc boinc    163840 Nov 21 22:46 result.tar.gz
22:46:28 (3886790): run_atlas exited; CPU time 31.976267
22:46:28 (3886790): called boinc_finish(0)

</stderr_txt>
]]>

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