Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:55:19 (3949340): wrapper (7.7.26015): starting
22:55:19 (3949340): wrapper: running run_atlas (--nthreads 3)
[2025-11-21 22:55:19] Arguments: --nthreads 3
[2025-11-21 22:55:19] Threads: 3
[2025-11-21 22:55:19] Checking for CVMFS
[2025-11-21 22:55:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:55:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:55:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:55:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:55:20] 2.9.2.0 3761160 40 57108 153145 3 88 34566376 36864001 0 130560 0 563480 99.999 3882 20983 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 22:55:20] CVMFS is ok
[2025-11-21 22:55:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 22:55:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 22:55:20] Further information can be found at the LHC@home message board.
[2025-11-21 22:55:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:55:20] Checking for apptainer binary...
[2025-11-21 22:55:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:55:20] Running /usr/bin/apptainer --version
[2025-11-21 22:55:20] apptainer version 1.4.1-1.1
[2025-11-21 22:55:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:55:20] thA335
[2025-11-21 22:55:20] apptainer works
[2025-11-21 22:55:20] Set ATHENA_PROC_NUMBER=3
[2025-11-21 22:55:20] Set ATHENA_CORE_NUMBER=3
[2025-11-21 22:55:20] Starting ATLAS job with PandaID=6893881982
[2025-11-21 22:55:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:59:38]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:59:38] 2025-11-21 21:58:45,767 | INFO     | sufficient remaining disk space (828299542528 B)
[2025-11-21 22:59:38] 2025-11-21 21:58:45,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:59:38] 2025-11-21 21:58:45,767 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:59:38] 2025-11-21 21:58:45,767 | INFO     | update_server=False
[2025-11-21 22:59:38] 2025-11-21 21:58:45,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:59:38] 2025-11-21 21:58:45,768 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 22:59:38] 2025-11-21 21:58:45,768 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:59:38] 2025-11-21 21:58:45,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:59:38] 2025-11-21 21:58:45,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:59:38] 2025-11-21 21:58:45,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:59:38] 2025-11-21 21:58:45,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:59:38] 2025-11-21 21:58:45,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:59:38] 2025-11-21 21:58:45,961 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:59:38] 2025-11-21 21:58:45,961 | INFO     | aborting loop
[2025-11-21 22:59:38] 2025-11-21 21:58:46,475 | INFO     | all payload control threads have been joined
[2025-11-21 22:59:38] 2025-11-21 21:58:46,576 | INFO     | all data control threads have been joined
[2025-11-21 22:59:38] 2025-11-21 21:58:46,773 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:46,774 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:46,866 | INFO     | all job control threads have been joined
[2025-11-21 22:59:38] 2025-11-21 21:58:46,967 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,003 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,304 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,481 | INFO     | [payload] control thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,485 | INFO     | [job] validate thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,548 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,582 | INFO     | [data] control thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,610 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,678 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,774 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:47,872 | INFO     | [job] control thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:48,023 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:58:49,775 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:59:38] 2025-11-21 21:59:32,275 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:59:38] 2025-11-21 21:59:33,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139868723615552)>', '<ExcThread(monitor, started 139867950409472)>']
[2025-11-21 22:59:38] 2025-11-21 21:59:34,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:59:38] 2025-11-21 21:59:34,017 | INFO     | [monitor] control thread has ended
[2025-11-21 22:59:38] 2025-11-21 21:59:38,307 | INFO     | all workflow threads have been joined
[2025-11-21 22:59:38] 2025-11-21 21:59:38,308 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:59:38] 2025-11-21 21:59:38,309 | INFO     | traces error code: 0
[2025-11-21 22:59:38] 2025-11-21 21:59:38,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:59:38] 2025-11-21 21:59:38,355 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:59:38] 2025-11-21 21:59:38,359 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:59:38] 2025-11-21 21:59:38,361 [wrapper] pilotpid: 3953078
[2025-11-21 22:59:38] 2025-11-21 21:59:38,364 [wrapper] Pilot exit status: 0
[2025-11-21 22:59:38] 2025-11-21 21:59:38,371 [wrapper] pandaids: 6893881982
[2025-11-21 22:59:38] 2025-11-21 21:59:38,387 [wrapper] cleanup supervisor_pilot 3953084 3953079
[2025-11-21 22:59:38] 2025-11-21 21:59:38,390 [wrapper] Test setup, not cleaning
[2025-11-21 22:59:38] 2025-11-21 21:59:38,393 [wrapper] apfmon messages muted
[2025-11-21 22:59:38] 2025-11-21 21:59:38,396 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:59:38] 2025-11-21 21:59:38,398 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:59:38]  *** Error codes and diagnostics ***
[2025-11-21 22:59:38]     "exeErrorCode": 65,
[2025-11-21 22:59:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 22:59:38]     "pilotErrorCode": 1305,
[2025-11-21 22:59:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 22:59:38]  *** Listing of results directory ***
[2025-11-21 22:59:38] total 405120
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc    576529 Nov 20 21:07 pilot3.tar.gz
[2025-11-21 22:59:38] -rwx------ 1 boinc boinc     36292 Nov 20 21:33 runpilot2-wrapper.sh
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc      5112 Nov 20 21:33 queuedata.json
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc       100 Nov 21 22:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:59:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 22:55 run_atlas
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc       105 Nov 21 22:55 job.xml
[2025-11-21 22:59:38] -rw-r--r-- 2 boinc boinc 410655749 Nov 21 22:55 EVNT.47493127._000885.pool.root.1
[2025-11-21 22:59:38] -rw-r--r-- 2 boinc boinc    590099 Nov 21 22:55 input.tar.gz
[2025-11-21 22:59:38] -rw-r--r-- 2 boinc boinc     15847 Nov 21 22:55 start_atlas.sh
[2025-11-21 22:59:38] drwxrwx--x 2 boinc boinc      4096 Nov 21 22:55 shared
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc         0 Nov 21 22:55 boinc_setup_complete
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc      6194 Nov 21 22:55 init_data.xml
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc         0 Nov 21 22:55 boinc_lockfile
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc      2786 Nov 21 22:55 pandaJob.out
[2025-11-21 22:59:38] -rw------- 1 boinc boinc    989798 Nov 21 22:55 agis_schedconf.cvmfs.json
[2025-11-21 22:59:38] -rw------- 1 boinc boinc   1526164 Nov 21 22:55 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:59:38] drwx------ 5 boinc boinc      4096 Nov 21 22:55 pilot3
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc       522 Nov 21 22:56 boinc_task_state.xml
[2025-11-21 22:59:38] -rw------- 1 boinc boinc       951 Nov 21 22:56 memory_monitor_summary.json
[2025-11-21 22:59:38] -rw------- 1 boinc boinc     55880 Nov 21 22:56 log.47523449._008850.job.log.tgz.1
[2025-11-21 22:59:38] -rw------- 1 boinc boinc        95 Nov 21 22:58 pilot_heartbeat.json
[2025-11-21 22:59:38] -rw------- 1 boinc boinc      8420 Nov 21 22:58 heartbeat.json
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc      8192 Nov 21 22:59 boinc_mmap_file
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc        22 Nov 21 22:59 wrapper_checkpoint.txt
[2025-11-21 22:59:38] -rw------- 1 boinc boinc      4556 Nov 21 22:59 pilotlog.txt
[2025-11-21 22:59:38] -rw------- 1 boinc boinc     93035 Nov 21 22:59 log.47523449._008850.job.log.1
[2025-11-21 22:59:38] -rw------- 1 boinc boinc       186 Nov 21 22:59 output.list
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc       620 Nov 21 22:59 runtime_log
[2025-11-21 22:59:38] -rw------- 1 boinc boinc    163840 Nov 21 22:59 result.tar.gz
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc      8744 Nov 21 22:59 runtime_log.err
[2025-11-21 22:59:38] -rw------- 1 boinc boinc       649 Nov 21 22:59 9dbLDmTWQg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmm4GKDmfDOYUn.diag
[2025-11-21 22:59:38] -rw-r--r-- 1 boinc boinc      8046 Nov 21 22:59 stderr.txt
[2025-11-21 22:59:38] No HITS result produced
[2025-11-21 22:59:38]  *** Contents of shared directory: ***
[2025-11-21 22:59:38] total 401792
[2025-11-21 22:59:38] -rw-r--r-- 2 boinc boinc 410655749 Nov 21 22:55 ATLAS.root_0
[2025-11-21 22:59:38] -rw-r--r-- 2 boinc boinc    590099 Nov 21 22:55 input.tar.gz
[2025-11-21 22:59:38] -rw-r--r-- 2 boinc boinc     15847 Nov 21 22:55 start_atlas.sh
[2025-11-21 22:59:38] -rw------- 1 boinc boinc    163840 Nov 21 22:59 result.tar.gz
22:59:39 (3949340): run_atlas exited; CPU time 31.710649
22:59:39 (3949340): called boinc_finish(0)

</stderr_txt>
]]>

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