Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:28:57 (3824185): wrapper (7.7.26015): starting
22:28:57 (3824185): wrapper: running run_atlas (--nthreads 3)
[2025-11-21 22:28:57] Arguments: --nthreads 3
[2025-11-21 22:28:57] Threads: 3
[2025-11-21 22:28:57] Checking for CVMFS
[2025-11-21 22:28:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:28:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:28:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:28:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:28:57] 2.9.2.0 3761160 13 50088 153143 2 88 34560432 36864001 0 130560 0 187821 99.999 1293 10261 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 22:28:57] CVMFS is ok
[2025-11-21 22:28:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 22:28:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 22:28:57] Further information can be found at the LHC@home message board.
[2025-11-21 22:28:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:28:57] Checking for apptainer binary...
[2025-11-21 22:28:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:28:57] Running /usr/bin/apptainer --version
[2025-11-21 22:28:57] apptainer version 1.4.1-1.1
[2025-11-21 22:28:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:28:57] thA335
[2025-11-21 22:28:57] apptainer works
[2025-11-21 22:28:57] Set ATHENA_PROC_NUMBER=3
[2025-11-21 22:28:57] Set ATHENA_CORE_NUMBER=3
[2025-11-21 22:28:57] Starting ATLAS job with PandaID=6894267697
[2025-11-21 22:28:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:33:15]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:33:15] 2025-11-21 21:32:19,958 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:33:15] 2025-11-21 21:32:19,967 | INFO     | cat /etc/os-release:
[2025-11-21 22:33:15] NAME="CentOS Linux"
[2025-11-21 22:33:15] VERSION="7 (Core)"
[2025-11-21 22:33:15] ID="centos"
[2025-11-21 22:33:15] ID_LIKE="rhel fedora"
[2025-11-21 22:33:15] VERSION_ID="7"
[2025-11-21 22:33:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:33:15] ANSI_COLOR="0;31"
[2025-11-21 22:33:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:33:15] HOME_URL="https://www.centos.org/"
[2025-11-21 22:33:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:33:15] 
[2025-11-21 22:33:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:33:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:33:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:33:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:33:15] 
[2025-11-21 22:33:15] 2025-11-21 21:32:19,967 | INFO     | ***************************************
[2025-11-21 22:33:15] 2025-11-21 21:32:20,470 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | INFO     | sufficient remaining disk space (827477458944 B)
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | INFO     | update_server=False
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | INFO     | aborting loop
[2025-11-21 22:33:15] 2025-11-21 21:32:20,484 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:33:15] 2025-11-21 21:32:20,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:33:15] 2025-11-21 21:32:20,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:33:15] 2025-11-21 21:32:21,302 | INFO     | all data control threads have been joined
[2025-11-21 22:33:15] 2025-11-21 21:32:21,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:33:15] 2025-11-21 21:32:21,490 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:21,491 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:21,491 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:21,532 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:21,619 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:21,746 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:21,915 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:21,930 | INFO     | all payload control threads have been joined
[2025-11-21 22:33:15] 2025-11-21 21:32:22,071 | INFO     | all job control threads have been joined
[2025-11-21 22:33:15] 2025-11-21 21:32:22,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:33:15] 2025-11-21 21:32:22,306 | INFO     | [data] control thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:22,331 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:22,833 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:22,902 | INFO     | [job] validate thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:22,936 | INFO     | [payload] control thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:22,986 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:23,076 | INFO     | [job] control thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:23,365 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:32:26,087 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:33:15] 2025-11-21 21:33:09,207 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:33:15] 2025-11-21 21:33:10,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737352804160)>', '<ExcThread(monitor, started 139736417036032)>']
[2025-11-21 22:33:15] 2025-11-21 21:33:10,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:33:15] 2025-11-21 21:33:10,743 | INFO     | [monitor] control thread has ended
[2025-11-21 22:33:15] 2025-11-21 21:33:15,187 | INFO     | all workflow threads have been joined
[2025-11-21 22:33:15] 2025-11-21 21:33:15,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:33:15] 2025-11-21 21:33:15,188 | INFO     | traces error code: 0
[2025-11-21 22:33:15] 2025-11-21 21:33:15,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:33:15] 2025-11-21 21:33:15,237 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:33:15] 2025-11-21 21:33:15,240 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:33:15] 2025-11-21 21:33:15,243 [wrapper] pilotpid: 3827915
[2025-11-21 22:33:15] 2025-11-21 21:33:15,246 [wrapper] Pilot exit status: 0
[2025-11-21 22:33:15] 2025-11-21 21:33:15,253 [wrapper] pandaids: 6894267697
[2025-11-21 22:33:15] 2025-11-21 21:33:15,270 [wrapper] cleanup supervisor_pilot 3827921 3827916
[2025-11-21 22:33:15] 2025-11-21 21:33:15,272 [wrapper] Test setup, not cleaning
[2025-11-21 22:33:15] 2025-11-21 21:33:15,275 [wrapper] apfmon messages muted
[2025-11-21 22:33:15] 2025-11-21 21:33:15,277 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:33:15] 2025-11-21 21:33:15,280 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:33:15]  *** Error codes and diagnostics ***
[2025-11-21 22:33:15]     "exeErrorCode": 65,
[2025-11-21 22:33:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 22:33:15]     "pilotErrorCode": 1305,
[2025-11-21 22:33:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 22:33:15]  *** Listing of results directory ***
[2025-11-21 22:33:15] total 407116
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:24 queuedata.json
[2025-11-21 22:33:15] -rwx------ 1 boinc boinc     36292 Nov 21 06:25 runpilot2-wrapper.sh
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc       100 Nov 21 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:33:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 22:28 run_atlas
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc       105 Nov 21 22:28 job.xml
[2025-11-21 22:33:15] -rw-r--r-- 2 boinc boinc 412695246 Nov 21 22:28 EVNT.47493127._002247.pool.root.1
[2025-11-21 22:33:15] drwxrwx--x 2 boinc boinc      4096 Nov 21 22:28 shared
[2025-11-21 22:33:15] -rw-r--r-- 2 boinc boinc    590106 Nov 21 22:28 input.tar.gz
[2025-11-21 22:33:15] -rw-r--r-- 2 boinc boinc     15847 Nov 21 22:28 start_atlas.sh
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc         0 Nov 21 22:28 boinc_setup_complete
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc      6194 Nov 21 22:28 init_data.xml
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc         0 Nov 21 22:28 boinc_lockfile
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc      2786 Nov 21 22:28 pandaJob.out
[2025-11-21 22:33:15] -rw------- 1 boinc boinc    989798 Nov 21 22:29 agis_schedconf.cvmfs.json
[2025-11-21 22:33:15] -rw------- 1 boinc boinc   1526164 Nov 21 22:29 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:33:15] drwx------ 5 boinc boinc      4096 Nov 21 22:29 pilot3
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc       522 Nov 21 22:30 boinc_task_state.xml
[2025-11-21 22:33:15] -rw------- 1 boinc boinc       966 Nov 21 22:30 memory_monitor_summary.json
[2025-11-21 22:33:15] -rw------- 1 boinc boinc     55614 Nov 21 22:30 log.47533967._002188.job.log.tgz.1
[2025-11-21 22:33:15] -rw------- 1 boinc boinc        95 Nov 21 22:32 pilot_heartbeat.json
[2025-11-21 22:33:15] -rw------- 1 boinc boinc      8384 Nov 21 22:32 heartbeat.json
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc      8192 Nov 21 22:33 boinc_mmap_file
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc        22 Nov 21 22:33 wrapper_checkpoint.txt
[2025-11-21 22:33:15] -rw------- 1 boinc boinc      4556 Nov 21 22:33 pilotlog.txt
[2025-11-21 22:33:15] -rw------- 1 boinc boinc     91492 Nov 21 22:33 log.47533967._002188.job.log.1
[2025-11-21 22:33:15] -rw------- 1 boinc boinc       186 Nov 21 22:33 output.list
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc       620 Nov 21 22:33 runtime_log
[2025-11-21 22:33:15] -rw------- 1 boinc boinc    163840 Nov 21 22:33 result.tar.gz
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc      8744 Nov 21 22:33 runtime_log.err
[2025-11-21 22:33:15] -rw------- 1 boinc boinc       649 Nov 21 22:33 Wt6NDmIpYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb6IKDmAS8KPm.diag
[2025-11-21 22:33:15] -rw-r--r-- 1 boinc boinc      9179 Nov 21 22:33 stderr.txt
[2025-11-21 22:33:15] No HITS result produced
[2025-11-21 22:33:15]  *** Contents of shared directory: ***
[2025-11-21 22:33:15] total 403784
[2025-11-21 22:33:15] -rw-r--r-- 2 boinc boinc 412695246 Nov 21 22:28 ATLAS.root_0
[2025-11-21 22:33:15] -rw-r--r-- 2 boinc boinc    590106 Nov 21 22:28 input.tar.gz
[2025-11-21 22:33:15] -rw-r--r-- 2 boinc boinc     15847 Nov 21 22:28 start_atlas.sh
[2025-11-21 22:33:15] -rw------- 1 boinc boinc    163840 Nov 21 22:33 result.tar.gz
22:33:16 (3824185): run_atlas exited; CPU time 30.716292
22:33:16 (3824185): called boinc_finish(0)

</stderr_txt>
]]>

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