Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:46:39 (2622238): wrapper (7.7.26015): starting
01:46:39 (2622238): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 01:46:39] Arguments: --nthreads 4
[2025-11-25 01:46:39] Threads: 4
[2025-11-25 01:46:39] Checking for CVMFS
[2025-11-25 01:46:39] No cvmfs_config command found, will try listing directly
[2025-11-25 01:46:39] CVMFS is ok
[2025-11-25 01:46:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 01:46:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 01:46:39] Further information can be found at the LHC@home message board.
[2025-11-25 01:46:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:46:39] Checking for apptainer binary...
[2025-11-25 01:46:39] which: no apptainer in ((null))
[2025-11-25 01:46:39] apptainer is not installed, using version from CVMFS
[2025-11-25 01:46:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:46:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-11-25 01:46:39] apptainer works
[2025-11-25 01:46:39] Set ATHENA_PROC_NUMBER=4
[2025-11-25 01:46:39] Set ATHENA_CORE_NUMBER=4
[2025-11-25 01:46:39] Starting ATLAS job with PandaID=6894267597
[2025-11-25 01:46:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:37:33]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:37:33] 2025-11-25 18:14:33,557 | INFO     | time since job start (62863s) is within the limit (172800.0s)
[2025-11-25 19:37:33] 2025-11-25 18:14:34,000 | INFO     | monitor loop #4503: job 0:6894267597 is in state 'finished'
[2025-11-25 19:37:33] 2025-11-25 18:14:34,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:37:33] 2025-11-25 18:14:34,745 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 19:37:33] 2025-11-25 18:14:34,755 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2660.7485000000006
[2025-11-25 19:37:33] 2025-11-25 18:14:34,768 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6894267597/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:37:33] 2025-11-25 18:14:34,769 | INFO     | extracted standard info from prmon json
[2025-11-25 19:37:33] 2025-11-25 18:14:34,769 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:37:33] 2025-11-25 18:14:34,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:37:33] 2025-11-25 18:14:34,787 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:37:33] 2025-11-25 18:14:34,789 | INFO     | sum of square deviations: 338836055323.49396
[2025-11-25 19:37:33] 2025-11-25 18:14:34,810 | INFO     | sum of deviations: 966802685131.9519
[2025-11-25 19:37:33] 2025-11-25 18:14:34,811 | INFO     | mean x: 1764063022.5019417
[2025-11-25 19:37:33] 2025-11-25 18:14:34,811 | INFO     | mean y: 2301824.773786408
[2025-11-25 19:37:33] 2025-11-25 18:14:34,811 | INFO     | intersect: -5031108404.455173
[2025-11-25 19:37:33] 2025-11-25 18:14:34,812 | INFO     | chi2: 3.752771601307712
[2025-11-25 19:37:33] 2025-11-25 18:14:34,813 | INFO     | sum of square deviations: 333925461535.9943
[2025-11-25 19:37:33] 2025-11-25 18:14:34,835 | INFO     | sum of deviations: 1163468625624.2222
[2025-11-25 19:37:33] 2025-11-25 18:14:34,835 | INFO     | mean x: 1764062870.0019512
[2025-11-25 19:37:33] 2025-11-25 18:14:34,835 | INFO     | mean y: 2307929.388292683
[2025-11-25 19:37:33] 2025-11-25 18:14:34,835 | INFO     | intersect: -6144069149.601404
[2025-11-25 19:37:33] 2025-11-25 18:14:34,837 | INFO     | chi2: 2.0375354667824497
[2025-11-25 19:37:33] 2025-11-25 18:14:34,837 | INFO     | current chi2=2.0375354667824497 (change=45.70584934951974 %)
[2025-11-25 19:37:33] 2025-11-25 18:14:34,838 | INFO     | sum of square deviations: 329062543060.9937
[2025-11-25 19:37:33] 2025-11-25 18:14:34,860 | INFO     | sum of deviations: 1212375704769.0767
[2025-11-25 19:37:33] 2025-11-25 18:14:34,861 | INFO     | mean x: 1764062717.5019608
[2025-11-25 19:37:33] 2025-11-25 18:14:34,861 | INFO     | mean y: 2309459.9607843137
[2025-11-25 19:37:33] 2025-11-25 18:14:34,861 | INFO     | intersect: -6497083514.07294
[2025-11-25 19:37:33] 2025-11-25 18:14:34,862 | INFO     | chi2: 1.8301607739138024
[2025-11-25 19:37:33] 2025-11-25 18:14:34,862 | INFO     | current chi2=1.8301607739138024 (change=10.177721872793734 %)
[2025-11-25 19:37:33] 2025-11-25 18:14:34,862 | INFO     | right removable region: 1019
[2025-11-25 19:37:33] 2025-11-25 18:14:34,864 | INFO     | sum of square deviations: 333925460315.9943
[2025-11-25 19:37:33] 2025-11-25 18:14:34,885 | INFO     | sum of deviations: 783376616543.7731
[2025-11-25 19:37:33] 2025-11-25 18:14:34,885 | INFO     | mean x: 1764063175.0019512
[2025-11-25 19:37:33] 2025-11-25 18:14:34,885 | INFO     | mean y: 2307511.6136585367
[2025-11-25 19:37:33] 2025-11-25 18:14:34,886 | INFO     | intersect: -4136118591.3099556
[2025-11-25 19:37:33] 2025-11-25 18:14:34,887 | INFO     | chi2: 2.028776880907262
[2025-11-25 19:37:33] 2025-11-25 18:14:34,887 | INFO     | current chi2=2.028776880907262 (change=45.93923914260322 %)
[2025-11-25 19:37:33] 2025-11-25 18:14:34,888 | INFO     | sum of square deviations: 329062540620.9937
[2025-11-25 19:37:33] 2025-11-25 18:14:34,909 | INFO     | sum of deviations: 768415835119.9775
[2025-11-25 19:37:33] 2025-11-25 18:14:34,910 | INFO     | mean x: 1764063327.5019608
[2025-11-25 19:37:33] 2025-11-25 18:14:34,910 | INFO     | mean y: 2307980.261764706
[2025-11-25 19:37:33] 2025-11-25 18:14:34,910 | INFO     | intersect: -4117073680.2846947
[2025-11-25 19:37:33] 2025-11-25 18:14:34,911 | INFO     | chi2: 2.0271260897045242
[2025-11-25 19:37:33] 2025-11-25 18:14:34,911 | INFO     | current chi2=2.0271260897045242 (change=0.08136879014509828 %)
[2025-11-25 19:37:33] 2025-11-25 18:14:34,911 | INFO     | left removable region: 20
[2025-11-25 19:37:33] 2025-11-25 18:14:34,913 | INFO     | sum of square deviations: 309153646527.99603
[2025-11-25 19:37:33] 2025-11-25 18:14:34,933 | INFO     | sum of deviations: 1002970418153.9966
[2025-11-25 19:37:33] 2025-11-25 18:14:34,933 | INFO     | mean x: 1764063297.002002
[2025-11-25 19:37:33] 2025-11-25 18:14:34,933 | INFO     | mean y: 2315928.002002002
[2025-11-25 19:37:33] 2025-11-25 18:14:34,933 | INFO     | intersect: -5720739007.673787
[2025-11-25 19:37:33] 2025-11-25 18:14:34,935 | INFO     | chi2: 0.08625215882108847
[2025-11-25 19:37:33] 2025-11-25 18:14:34,935 | INFO     | current memory leak: 3.24 B/s (using 999 data points, chi2=0.09)
[2025-11-25 19:37:33] 2025-11-25 18:14:34,936 | INFO     | could have reported an average CPU frequency of 2628 MHz (38 samples)
[2025-11-25 19:37:33] 2025-11-25 18:14:34,936 | INFO     | ..............................
[2025-11-25 19:37:33] 2025-11-25 18:14:34,936 | INFO     | . Timing measurements:
[2025-11-25 19:37:33] 2025-11-25 18:14:34,936 | INFO     | . get job = 0 s
[2025-11-25 19:37:33] 2025-11-25 18:14:34,936 | INFO     | . initial setup = 1 s
[2025-11-25 19:37:33] 2025-11-25 18:14:34,936 | INFO     | . payload setup = 6 s
[2025-11-25 19:37:33] 2025-11-25 18:14:34,936 | INFO     | . stage-in = 0 s
[2025-11-25 19:37:33] 2025-11-25 18:14:34,936 | INFO     | . payload execution = 62824 s
[2025-11-25 19:37:33] 2025-11-25 18:14:34,937 | INFO     | . stage-out = 2 s
[2025-11-25 19:37:33] 2025-11-25 18:14:34,937 | INFO     | . log creation = 0 s
[2025-11-25 19:37:33] 2025-11-25 18:14:34,937 | INFO     | ..............................
[2025-11-25 19:37:33] 2025-11-25 18:14:35,034 | INFO     | 
[2025-11-25 19:37:33] 2025-11-25 18:14:35,034 | INFO     | job summary report
[2025-11-25 19:37:33] 2025-11-25 18:14:35,034 | INFO     | --------------------------------------------------
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | PanDA job id: 6894267597
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | task id: 47533967
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | errors: (none)
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | pilot state: finished 
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | transexitcode: 0
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | exeerrorcode: 0
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | exeerrordiag: 
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | exitcode: 0
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | exitmsg: OK
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | cpuconsumptiontime: 248672 s
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | nevents: 1000
[2025-11-25 19:37:33] 2025-11-25 18:14:35,035 | INFO     | neventsw: 0
[2025-11-25 19:37:33] 2025-11-25 18:14:35,036 | INFO     | pid: 2632995
[2025-11-25 19:37:33] 2025-11-25 18:14:35,036 | INFO     | pgrp: 2632995
[2025-11-25 19:37:33] 2025-11-25 18:14:35,036 | INFO     | corecount: 4
[2025-11-25 19:37:33] 2025-11-25 18:14:35,036 | INFO     | event service: False
[2025-11-25 19:37:33] 2025-11-25 18:14:35,036 | INFO     | sizes: {0: 2284270, 5: 2284532, 11: 2284588, 62834: 2337629, 62838: 2346650, 62841: 2346706, 62848: 2347080}
[2025-11-25 19:37:33] 2025-11-25 18:14:35,036 | INFO     | --------------------------------------------------
[2025-11-25 19:37:33] 2025-11-25 18:14:35,036 | INFO     | 
[2025-11-25 19:37:33] 2025-11-25 18:14:35,036 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-25 19:37:33] 2025-11-25 18:14:35,056 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,056 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,058 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:37:33] 2025-11-25 18:14:35,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:37:33] 2025-11-25 18:14:35,058 | INFO     | job 6894267597 has completed (purged errors)
[2025-11-25 19:37:33] 2025-11-25 18:14:35,058 | INFO     | overall cleanup function is called
[2025-11-25 19:37:33] 2025-11-25 18:14:36,071 | INFO     | --- collectZombieJob: --- 10, [2632995]
[2025-11-25 19:37:33] 2025-11-25 18:14:36,071 | INFO     | zombie collector waiting for pid 2632995
[2025-11-25 19:37:33] 2025-11-25 18:14:36,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:37:33] 2025-11-25 18:14:36,071 | INFO     | collected zombie processes
[2025-11-25 19:37:33] 2025-11-25 18:14:36,072 | INFO     | will attempt to kill all subprocesses of pid=2632995
[2025-11-25 19:37:33] 2025-11-25 18:14:36,426 | INFO     | process IDs to be killed: [2632995] (in reverse order)
[2025-11-25 19:37:33] 2025-11-25 18:14:36,528 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:37:33] 2025-11-25 18:14:36,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:37:33] 2025-11-25 18:14:36,541 | INFO     | did not find any defunct processes belonging to 2632995
[2025-11-25 19:37:33] 2025-11-25 18:14:36,553 | INFO     | did not find any defunct processes belonging to 2632995
[2025-11-25 19:37:33] 2025-11-25 18:14:36,555 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:37:33] 2025-11-25 18:14:36,555 | INFO     | ready for new job
[2025-11-25 19:37:33] 2025-11-25 18:14:36,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:37:33] 2025-11-25 18:14:36,560 | INFO     | ***************************************
[2025-11-25 19:37:33] 2025-11-25 18:14:36,560 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:37:33] 2025-11-25 18:14:36,560 | INFO     | ***************************************
[2025-11-25 19:37:33] 2025-11-25 18:14:36,561 | INFO     | 
[2025-11-25 19:37:33] 2025-11-25 18:14:36,564 | INFO     | architecture information:
[2025-11-25 19:37:33] 2025-11-25 18:14:36,565 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:37:33] 2025-11-25 18:14:36,583 | INFO     | cat /etc/os-release:
[2025-11-25 19:37:33] NAME="CentOS Linux"
[2025-11-25 19:37:33] VERSION="7 (Core)"
[2025-11-25 19:37:33] ID="centos"
[2025-11-25 19:37:33] ID_LIKE="rhel fedora"
[2025-11-25 19:37:33] VERSION_ID="7"
[2025-11-25 19:37:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:37:33] ANSI_COLOR="0;31"
[2025-11-25 19:37:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:37:33] HOME_URL="https://www.centos.org/"
[2025-11-25 19:37:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:37:33] 
[2025-11-25 19:37:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:37:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:37:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:37:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:37:33] 
[2025-11-25 19:37:33] 2025-11-25 18:14:36,583 | INFO     | ***************************************
[2025-11-25 19:37:33] 2025-11-25 18:14:37,086 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-25 19:37:33] 2025-11-25 18:14:37,104 | INFO     | sufficient remaining disk space (655077933056 B)
[2025-11-25 19:37:33] 2025-11-25 18:14:37,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:37:33] 2025-11-25 18:14:37,105 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:37:33] 2025-11-25 18:14:37,105 | INFO     | update_server=False
[2025-11-25 19:37:33] 2025-11-25 18:14:37,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:37:33] 2025-11-25 18:14:37,484 | INFO     | all payload control threads have been joined
[2025-11-25 19:37:33] 2025-11-25 18:14:37,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:37:33] 2025-11-25 18:14:37,513 | INFO     | aborting loop
[2025-11-25 19:37:33] 2025-11-25 18:14:37,612 | INFO     | all job control threads have been joined
[2025-11-25 19:37:33] 2025-11-25 18:14:37,881 | INFO     | all data control threads have been joined
[2025-11-25 19:37:33] 2025-11-25 18:14:38,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:37:33] 2025-11-25 18:14:38,111 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:38,208 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:38,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:37:33] 2025-11-25 18:14:38,481 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:38,490 | INFO     | [payload] control thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:38,514 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:38,617 | INFO     | [job] control thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:38,841 | INFO     | [job] validate thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:38,842 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:38,884 | INFO     | [data] control thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:39,311 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:39,587 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:39,598 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:39,681 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:40,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:37:33] 2025-11-25 18:14:40,081 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:41,050 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:14:42,358 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:37:33] 2025-11-25 18:15:07,130 | INFO     | PID=2626018 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 19:37:33] 2025-11-25 18:15:07,130 | INFO     | .. there are 2 such processes running
[2025-11-25 19:37:33] 2025-11-25 18:15:07,130 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:37:33] 2025-11-25 18:15:07,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:37:33] 2025-11-25 18:15:07,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:37:33] 2025-11-25 18:15:30,557 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:37:33] 2025-11-25 18:15:31,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23273047086912)>', '<ExcThread(monitor, started 23272743749376)>']
[2025-11-25 19:37:33] 2025-11-25 18:15:32,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:37:33] 2025-11-25 18:15:32,252 | INFO     | [monitor] control thread has ended
[2025-11-25 19:37:33] 2025-11-25 18:15:36,297 | INFO     | all workflow threads have been joined
[2025-11-25 19:37:33] 2025-11-25 18:15:36,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:37:33] 2025-11-25 18:15:36,298 | INFO     | traces error code: 0
[2025-11-25 19:37:33] 2025-11-25 18:15:36,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:37:33] 2025-11-25 18:15:36,459 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:37:33] 2025-11-25 18:15:36,462 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:37:33] 2025-11-25 18:15:36,465 [wrapper] pilotpid: 2626018
[2025-11-25 19:37:33] 2025-11-25 18:15:36,468 [wrapper] Pilot exit status: 0
[2025-11-25 19:37:33] 2025-11-25 18:15:36,527 [wrapper] pandaids: 6894267597
[2025-11-25 19:37:33] 2025-11-25 18:15:36,619 [wrapper] cleanup supervisor_pilot 3373413 2626019
[2025-11-25 19:37:33] 2025-11-25 18:15:36,622 [wrapper] Test setup, not cleaning
[2025-11-25 19:37:33] 2025-11-25 18:15:36,624 [wrapper] apfmon messages muted
[2025-11-25 19:37:33] 2025-11-25 18:15:36,627 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:37:33] 2025-11-25 18:15:36,629 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:37:33]  *** Error codes and diagnostics ***
[2025-11-25 19:37:33]     "exeErrorCode": 0,
[2025-11-25 19:37:33]     "exeErrorDiag": "",
[2025-11-25 19:37:33]     "pilotErrorCode": 0,
[2025-11-25 19:37:33]     "pilotErrorDiag": "",
[2025-11-25 19:37:33]  *** Listing of results directory ***
[2025-11-25 19:37:33] total 1342000
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:15 queuedata.json
[2025-11-25 19:37:33] -rwx------ 1 boinc boinc     36292 Nov 21 06:17 runpilot2-wrapper.sh
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc       100 Nov 25 01:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:37:33] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 01:46 run_atlas
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc       105 Nov 25 01:46 job.xml
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc      6635 Nov 25 01:46 init_data.xml
[2025-11-25 19:37:33] -rw-r--r-- 2 boinc boinc 408037452 Nov 25 01:46 EVNT.47493127._002240.pool.root.1
[2025-11-25 19:37:33] -rw-r--r-- 2 boinc boinc     15847 Nov 25 01:46 start_atlas.sh
[2025-11-25 19:37:33] drwxrwx--x 2 boinc boinc      4096 Nov 25 01:46 shared
[2025-11-25 19:37:33] -rw-r--r-- 2 boinc boinc    590105 Nov 25 01:46 input.tar.gz
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc         0 Nov 25 01:46 boinc_lockfile
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc      2785 Nov 25 01:46 pandaJob.out
[2025-11-25 19:37:33] -rw------- 1 boinc boinc    991801 Nov 25 01:46 agis_schedconf.cvmfs.json
[2025-11-25 19:37:33] drwx------ 5 boinc boinc      4096 Nov 25 01:46 pilot3
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc       532 Nov 25 19:05 boinc_task_state.xml
[2025-11-25 19:37:33] -rw------- 1 boinc boinc 941172153 Nov 25 19:13 HITS.47533967._002117.pool.root.1
[2025-11-25 19:37:33] -rw------- 1 boinc boinc        95 Nov 25 19:14 pilot_heartbeat.json
[2025-11-25 19:37:33] -rw------- 1 boinc boinc      1045 Nov 25 19:14 memory_monitor_summary.json
[2025-11-25 19:37:33] -rw------- 1 boinc boinc   1516240 Nov 25 19:14 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:37:33] -rw------- 1 boinc boinc   1760776 Nov 25 19:14 log.47533967._002117.job.log.tgz.1
[2025-11-25 19:37:33] -rw------- 1 boinc boinc      8630 Nov 25 19:14 heartbeat.json
[2025-11-25 19:37:33] -rw------- 1 boinc boinc      4833 Nov 25 19:15 pilotlog.txt
[2025-11-25 19:37:33] -rw------- 1 boinc boinc   8780905 Nov 25 19:15 log.47533967._002117.job.log.1
[2025-11-25 19:37:33] -rw------- 1 boinc boinc       353 Nov 25 19:15 output.list
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc       620 Nov 25 19:15 runtime_log
[2025-11-25 19:37:33] -rw------- 1 boinc boinc  10557440 Nov 25 19:15 result.tar.gz
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc      9206 Nov 25 19:15 runtime_log.err
[2025-11-25 19:37:33] -rw------- 1 boinc boinc       670 Nov 25 19:15 7UHODmXhYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm45IKDmirRULm.diag
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc        28 Nov 25 19:37 wrapper_checkpoint.txt
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc      8192 Nov 25 19:37 boinc_mmap_file
[2025-11-25 19:37:33] -rw-r--r-- 1 boinc boinc     21114 Nov 25 19:37 stderr.txt
[2025-11-25 19:37:33] HITS file was successfully produced:
[2025-11-25 19:37:33] -rw------- 1 boinc boinc 941172153 Nov 25 19:13 shared/HITS.pool.root.1
[2025-11-25 19:37:33]  *** Contents of shared directory: ***
[2025-11-25 19:37:33] total 1328508
[2025-11-25 19:37:33] -rw-r--r-- 2 boinc boinc 408037452 Nov 25 01:46 ATLAS.root_0
[2025-11-25 19:37:33] -rw-r--r-- 2 boinc boinc     15847 Nov 25 01:46 start_atlas.sh
[2025-11-25 19:37:33] -rw-r--r-- 2 boinc boinc    590105 Nov 25 01:46 input.tar.gz
[2025-11-25 19:37:33] -rw------- 1 boinc boinc 941172153 Nov 25 19:13 HITS.pool.root.1
[2025-11-25 19:37:33] -rw------- 1 boinc boinc  10557440 Nov 25 19:15 result.tar.gz
19:37:34 (2622238): run_atlas exited; CPU time 251141.229020
19:37:34 (2622238): called boinc_finish(0)

</stderr_txt>
]]>

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