Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:11 (358863): wrapper (7.7.26015): starting
19:20:11 (358863): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 19:20:11] Arguments: --nthreads 4
[2025-11-22 19:20:11] Threads: 4
[2025-11-22 19:20:11] Checking for CVMFS
[2025-11-22 19:20:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:20:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:20:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:20:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:20:11] 2.13.3.0 6033 1661 68424 153181 3 81 4055648 4097024 0 130560 3 611424 99.979 68340 2930 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-22 19:20:11] CVMFS is ok
[2025-11-22 19:20:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:20:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:20:11] Further information can be found at the LHC@home message board.
[2025-11-22 19:20:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:20:11] Checking for apptainer binary...
[2025-11-22 19:20:11] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-22 19:20:11] apptainer is not installed, using version from CVMFS
[2025-11-22 19:20:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:20:11] pckeatlas07
[2025-11-22 19:20:11] apptainer works
[2025-11-22 19:20:11] Set ATHENA_PROC_NUMBER=4
[2025-11-22 19:20:11] Set ATHENA_CORE_NUMBER=4
[2025-11-22 19:20:11] Starting ATLAS job with PandaID=6894266742
[2025-11-22 19:20:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 08:19:45]  *** The last 200 lines of the pilot log: ***
[2025-11-23 08:19:45] 2025-11-23 07:19:10,959 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-23 08:19:45] 2025-11-23 07:19:11,363 | INFO     | monitor loop #3534: job 0:6894266742 is in state 'finished'
[2025-11-23 08:19:45] 2025-11-23 07:19:11,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 08:19:45] 2025-11-23 07:19:11,991 | INFO     | time since job start (46735s) is within the limit (172800.0s)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,789 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 08:19:45] 2025-11-23 07:19:13,790 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3755.0337499999996
[2025-11-23 08:19:45] 2025-11-23 07:19:13,791 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6894266742/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,791 | INFO     | extracted standard info from prmon json
[2025-11-23 08:19:45] 2025-11-23 07:19:13,791 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 08:19:45] 2025-11-23 07:19:13,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 08:19:45] 2025-11-23 07:19:13,798 | INFO     | fitting pss+swap vs Time
[2025-11-23 08:19:45] 2025-11-23 07:19:13,799 | INFO     | sum of square deviations: 139368296827.5
[2025-11-23 08:19:45] 2025-11-23 07:19:13,806 | INFO     | sum of deviations: 451068508157.4998
[2025-11-23 08:19:45] 2025-11-23 07:19:13,806 | INFO     | mean x: 1763858968.5
[2025-11-23 08:19:45] 2025-11-23 07:19:13,806 | INFO     | mean y: 2381073.270234987
[2025-11-23 08:19:45] 2025-11-23 07:19:13,806 | INFO     | intersect: -5706386642.434032
[2025-11-23 08:19:45] 2025-11-23 07:19:13,806 | INFO     | chi2: 2.4931631605853743
[2025-11-23 08:19:45] 2025-11-23 07:19:13,807 | INFO     | sum of square deviations: 136656925060.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,814 | INFO     | sum of deviations: 551367951374.9998
[2025-11-23 08:19:45] 2025-11-23 07:19:13,814 | INFO     | mean x: 1763858816.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,814 | INFO     | mean y: 2386698.5282522994
[2025-11-23 08:19:45] 2025-11-23 07:19:13,814 | INFO     | intersect: -7114231954.098796
[2025-11-23 08:19:45] 2025-11-23 07:19:13,815 | INFO     | chi2: 1.2796593517565515
[2025-11-23 08:19:45] 2025-11-23 07:19:13,815 | INFO     | current chi2=1.2796593517565515 (change=48.673260860468595 %)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,815 | INFO     | sum of square deviations: 133980949305.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,822 | INFO     | sum of deviations: 544958925161.50006
[2025-11-23 08:19:45] 2025-11-23 07:19:13,822 | INFO     | mean x: 1763858663.5
[2025-11-23 08:19:45] 2025-11-23 07:19:13,822 | INFO     | mean y: 2386333.0886243386
[2025-11-23 08:19:45] 2025-11-23 07:19:13,822 | INFO     | intersect: -7171995744.243681
[2025-11-23 08:19:45] 2025-11-23 07:19:13,823 | INFO     | chi2: 1.2787711358541227
[2025-11-23 08:19:45] 2025-11-23 07:19:13,823 | INFO     | current chi2=1.2787711358541227 (change=0.06941033965090752 %)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,823 | INFO     | right removable region: 755
[2025-11-23 08:19:45] 2025-11-23 07:19:13,823 | INFO     | sum of square deviations: 136656925060.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,830 | INFO     | sum of deviations: 357044516373.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,830 | INFO     | mean x: 1763859121.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,830 | INFO     | mean y: 2386343.890932983
[2025-11-23 08:19:45] 2025-11-23 07:19:13,830 | INFO     | intersect: -4606060879.190101
[2025-11-23 08:19:45] 2025-11-23 07:19:13,831 | INFO     | chi2: 1.320357956959099
[2025-11-23 08:19:45] 2025-11-23 07:19:13,831 | INFO     | current chi2=1.320357956959099 (change=47.040852446693066 %)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,831 | INFO     | sum of square deviations: 133980949305.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,838 | INFO     | sum of deviations: 343725815778.99945
[2025-11-23 08:19:45] 2025-11-23 07:19:13,838 | INFO     | mean x: 1763859273.5
[2025-11-23 08:19:45] 2025-11-23 07:19:13,838 | INFO     | mean y: 2387102.187830688
[2025-11-23 08:19:45] 2025-11-23 07:19:13,838 | INFO     | intersect: -4522763457.262005
[2025-11-23 08:19:45] 2025-11-23 07:19:13,839 | INFO     | chi2: 1.317415841985815
[2025-11-23 08:19:45] 2025-11-23 07:19:13,839 | INFO     | current chi2=1.317415841985815 (change=0.22282707183890912 %)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,839 | INFO     | left removable region: 20
[2025-11-23 08:19:45] 2025-11-23 07:19:13,839 | INFO     | sum of square deviations: 123123127120.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,846 | INFO     | sum of deviations: 424553858398.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,846 | INFO     | mean x: 1763859243.0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,846 | INFO     | mean y: 2393112.761904762
[2025-11-23 08:19:45] 2025-11-23 07:19:13,846 | INFO     | intersect: -6079756234.831968
[2025-11-23 08:19:45] 2025-11-23 07:19:13,846 | INFO     | chi2: 0.09639481455984028
[2025-11-23 08:19:45] 2025-11-23 07:19:13,846 | INFO     | current memory leak: 3.45 B/s (using 735 data points, chi2=0.10)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | could have reported an average CPU frequency of 3710 MHz (29 samples)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | ..............................
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | . Timing measurements:
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | . get job = 0 s
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | . initial setup = 1 s
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | . payload setup = 3 s
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | . stage-in = 0 s
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | . payload execution = 46712 s
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | . stage-out = 1 s
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | . log creation = 0 s
[2025-11-23 08:19:45] 2025-11-23 07:19:13,847 | INFO     | ..............................
[2025-11-23 08:19:45] 2025-11-23 07:19:13,895 | INFO     | 
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | job summary report
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | --------------------------------------------------
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | PanDA job id: 6894266742
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | task id: 47533967
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | errors: (none)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | pilot state: finished 
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | transexitcode: 0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | exeerrorcode: 0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | exeerrordiag: 
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | exitcode: 0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | exitmsg: OK
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | cpuconsumptiontime: 184103 s
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | nevents: 1000
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | neventsw: 0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | pid: 369709
[2025-11-23 08:19:45] 2025-11-23 07:19:13,896 | INFO     | pgrp: 369709
[2025-11-23 08:19:45] 2025-11-23 07:19:13,897 | INFO     | corecount: 4
[2025-11-23 08:19:45] 2025-11-23 07:19:13,897 | INFO     | event service: False
[2025-11-23 08:19:45] 2025-11-23 07:19:13,897 | INFO     | sizes: {0: 2298807, 2: 2299069, 11: 2299097, 46719: 2346189, 46721: 2355239, 46724: 2355429}
[2025-11-23 08:19:45] 2025-11-23 07:19:13,897 | INFO     | --------------------------------------------------
[2025-11-23 08:19:45] 2025-11-23 07:19:13,897 | INFO     | 
[2025-11-23 08:19:45] 2025-11-23 07:19:13,897 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-23 08:19:45] 2025-11-23 07:19:13,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,907 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,907 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 08:19:45] 2025-11-23 07:19:13,907 | INFO     | job 6894266742 has completed (purged errors)
[2025-11-23 08:19:45] 2025-11-23 07:19:13,907 | INFO     | overall cleanup function is called
[2025-11-23 08:19:45] 2025-11-23 07:19:14,916 | INFO     | --- collectZombieJob: --- 10, [369709]
[2025-11-23 08:19:45] 2025-11-23 07:19:14,916 | INFO     | zombie collector waiting for pid 369709
[2025-11-23 08:19:45] 2025-11-23 07:19:14,916 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 08:19:45] 2025-11-23 07:19:14,916 | INFO     | collected zombie processes
[2025-11-23 08:19:45] 2025-11-23 07:19:14,916 | INFO     | will attempt to kill all subprocesses of pid=369709
[2025-11-23 08:19:45] 2025-11-23 07:19:14,957 | INFO     | process IDs to be killed: [369709] (in reverse order)
[2025-11-23 08:19:45] 2025-11-23 07:19:14,975 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 08:19:45] 2025-11-23 07:19:14,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 08:19:45] 2025-11-23 07:19:14,977 | INFO     | did not find any defunct processes belonging to 369709
[2025-11-23 08:19:45] 2025-11-23 07:19:14,978 | INFO     | did not find any defunct processes belonging to 369709
[2025-11-23 08:19:45] 2025-11-23 07:19:14,978 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 08:19:45] 2025-11-23 07:19:14,979 | INFO     | ready for new job
[2025-11-23 08:19:45] 2025-11-23 07:19:14,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 08:19:45] 2025-11-23 07:19:14,980 | INFO     | ***************************************
[2025-11-23 08:19:45] 2025-11-23 07:19:14,980 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 08:19:45] 2025-11-23 07:19:14,980 | INFO     | ***************************************
[2025-11-23 08:19:45] 2025-11-23 07:19:14,980 | INFO     | 
[2025-11-23 08:19:45] 2025-11-23 07:19:14,980 | INFO     | architecture information:
[2025-11-23 08:19:45] 2025-11-23 07:19:14,981 | INFO     | executing command: cat /etc/os-release
[2025-11-23 08:19:45] 2025-11-23 07:19:15,016 | INFO     | cat /etc/os-release:
[2025-11-23 08:19:45] NAME="CentOS Linux"
[2025-11-23 08:19:45] VERSION="7 (Core)"
[2025-11-23 08:19:45] ID="centos"
[2025-11-23 08:19:45] ID_LIKE="rhel fedora"
[2025-11-23 08:19:45] VERSION_ID="7"
[2025-11-23 08:19:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 08:19:45] ANSI_COLOR="0;31"
[2025-11-23 08:19:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 08:19:45] HOME_URL="https://www.centos.org/"
[2025-11-23 08:19:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 08:19:45] 
[2025-11-23 08:19:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 08:19:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 08:19:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 08:19:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 08:19:45] 
[2025-11-23 08:19:45] 2025-11-23 07:19:15,017 | INFO     | ***************************************
[2025-11-23 08:19:45] 2025-11-23 07:19:15,519 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-23 08:19:45] 2025-11-23 07:19:15,527 | INFO     | sufficient remaining disk space (330677878784 B)
[2025-11-23 08:19:45] 2025-11-23 07:19:15,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 08:19:45] 2025-11-23 07:19:15,527 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 08:19:45] 2025-11-23 07:19:15,527 | INFO     | update_server=False
[2025-11-23 08:19:45] 2025-11-23 07:19:15,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 08:19:45] 2025-11-23 07:19:15,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:19:45] 2025-11-23 07:19:15,527 | INFO     | aborting loop
[2025-11-23 08:19:45] 2025-11-23 07:19:15,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:19:45] 2025-11-23 07:19:15,636 | INFO     | all job control threads have been joined
[2025-11-23 08:19:45] 2025-11-23 07:19:15,838 | INFO     | all data control threads have been joined
[2025-11-23 08:19:45] 2025-11-23 07:19:16,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 08:19:45] 2025-11-23 07:19:16,532 | INFO     | [job] retrieve thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:16,533 | INFO     | [job] job monitor thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:16,533 | INFO     | [job] queue monitor thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:16,642 | INFO     | [job] control thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:16,642 | INFO     | [data] copytool_in thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:16,757 | INFO     | all payload control threads have been joined
[2025-11-23 08:19:45] 2025-11-23 07:19:16,844 | INFO     | [data] control thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:16,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 08:19:45] 2025-11-23 07:19:17,211 | INFO     | [payload] failed_post thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:17,255 | INFO     | [job] validate thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:17,491 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:17,494 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:17,602 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:17,708 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:17,763 | INFO     | [payload] control thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:18,057 | INFO     | [payload] validate_post thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:18,162 | INFO     | [data] copytool_out thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:20,959 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 08:19:45] 2025-11-23 07:19:33,783 | INFO     | [monitor] cgroup control has ended
[2025-11-23 08:19:45] 2025-11-23 07:19:34,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673225393984)>', '<ExcThread(monitor, started 139672470681344)>']
[2025-11-23 08:19:45] 2025-11-23 07:19:39,809 | INFO     | all workflow threads have been joined
[2025-11-23 08:19:45] 2025-11-23 07:19:39,809 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 08:19:45] 2025-11-23 07:19:39,810 | INFO     | traces error code: 0
[2025-11-23 08:19:45] 2025-11-23 07:19:39,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 08:19:45] 2025-11-23 07:19:45,117 | INFO     | PID=362525 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 08:19:45] 2025-11-23 07:19:45,118 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 08:19:45] 2025-11-23 07:19:45,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 08:19:45] 2025-11-23 07:19:45,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 08:19:45] 2025-11-23 07:19:45,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 08:19:45] 2025-11-23 07:19:45,118 | INFO     | [monitor] control thread has ended
[2025-11-23 08:19:45] 2025-11-23 07:19:45,304 [wrapper] ==== pilot stdout END ====
[2025-11-23 08:19:45] 2025-11-23 07:19:45,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 08:19:45] 2025-11-23 07:19:45,307 [wrapper] pilotpid: 362525
[2025-11-23 08:19:45] 2025-11-23 07:19:45,308 [wrapper] Pilot exit status: 0
[2025-11-23 08:19:45] 2025-11-23 07:19:45,332 [wrapper] pandaids: 6894266742
[2025-11-23 08:19:45] 2025-11-23 07:19:45,342 [wrapper] cleanup supervisor_pilot  522027 362526
[2025-11-23 08:19:45] 2025-11-23 07:19:45,344 [wrapper] Test setup, not cleaning
[2025-11-23 08:19:45] 2025-11-23 07:19:45,345 [wrapper] apfmon messages muted
[2025-11-23 08:19:45] 2025-11-23 07:19:45,346 [wrapper] ==== wrapper stdout END ====
[2025-11-23 08:19:45] 2025-11-23 07:19:45,347 [wrapper] ==== wrapper stderr END ====
[2025-11-23 08:19:45]  *** Error codes and diagnostics ***
[2025-11-23 08:19:45]     "exeErrorCode": 0,
[2025-11-23 08:19:45]     "exeErrorDiag": "",
[2025-11-23 08:19:45]     "pilotErrorCode": 0,
[2025-11-23 08:19:45]     "pilotErrorDiag": "",
[2025-11-23 08:19:45]  *** Listing of results directory ***
[2025-11-23 08:19:45] total 1302112
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:13 queuedata.json
[2025-11-23 08:19:45] -rwx------ 1 boinc boinc     36292 Nov 21 06:14 runpilot2-wrapper.sh
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc       100 Nov 22 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 08:19:45] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 19:20 run_atlas
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc       105 Nov 22 19:20 job.xml
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc      6313 Nov 22 19:20 init_data.xml
[2025-11-23 08:19:45] -rw-r--r-- 2 boinc boinc 409031822 Nov 22 19:20 EVNT.47493127._002237.pool.root.1
[2025-11-23 08:19:45] drwxrwx--x 2 boinc boinc        68 Nov 22 19:20 shared
[2025-11-23 08:19:45] -rw-r--r-- 2 boinc boinc    590109 Nov 22 19:20 input.tar.gz
[2025-11-23 08:19:45] -rw-r--r-- 2 boinc boinc     15847 Nov 22 19:20 start_atlas.sh
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc         0 Nov 22 19:20 boinc_lockfile
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc      2786 Nov 22 19:20 pandaJob.out
[2025-11-23 08:19:45] -rw------- 1 boinc boinc    989784 Nov 22 19:20 agis_schedconf.cvmfs.json
[2025-11-23 08:19:45] drwx------ 5 boinc boinc      4096 Nov 22 19:20 pilot3
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc       532 Nov 23 08:14 boinc_task_state.xml
[2025-11-23 08:19:45] -rw------- 1 boinc boinc 904346243 Nov 23 08:18 HITS.47533967._002084.pool.root.1
[2025-11-23 08:19:45] -rw------- 1 boinc boinc      1038 Nov 23 08:19 memory_monitor_summary.json
[2025-11-23 08:19:45] -rw------- 1 boinc boinc   1526164 Nov 23 08:19 agis_ddmendpoints.agis.ALL.json
[2025-11-23 08:19:45] -rw------- 1 boinc boinc   1507378 Nov 23 08:19 log.47533967._002084.job.log.tgz.1
[2025-11-23 08:19:45] -rw------- 1 boinc boinc      8611 Nov 23 08:19 heartbeat.json
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc      8192 Nov 23 08:19 boinc_mmap_file
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc        29 Nov 23 08:19 wrapper_checkpoint.txt
[2025-11-23 08:19:45] -rw------- 1 boinc boinc       746 Nov 23 08:19 pilotlog.txt
[2025-11-23 08:19:45] -rw------- 1 boinc boinc        95 Nov 23 08:19 pilot_heartbeat.json
[2025-11-23 08:19:45] -rw------- 1 boinc boinc   6531511 Nov 23 08:19 log.47533967._002084.job.log.1
[2025-11-23 08:19:45] -rw------- 1 boinc boinc       353 Nov 23 08:19 output.list
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc       620 Nov 23 08:19 runtime_log
[2025-11-23 08:19:45] -rw------- 1 boinc boinc   8058880 Nov 23 08:19 result.tar.gz
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc      8817 Nov 23 08:19 runtime_log.err
[2025-11-23 08:19:45] -rw------- 1 boinc boinc       662 Nov 23 08:19 QwDLDmZeYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCMHKDmVCwFYo.diag
[2025-11-23 08:19:45] -rw-r--r-- 1 boinc boinc     21470 Nov 23 08:19 stderr.txt
[2025-11-23 08:19:45] HITS file was successfully produced:
[2025-11-23 08:19:45] -rw------- 1 boinc boinc 904346243 Nov 23 08:18 shared/HITS.pool.root.1
[2025-11-23 08:19:45]  *** Contents of shared directory: ***
[2025-11-23 08:19:45] total 1291068
[2025-11-23 08:19:45] -rw-r--r-- 2 boinc boinc 409031822 Nov 22 19:20 ATLAS.root_0
[2025-11-23 08:19:45] -rw-r--r-- 2 boinc boinc    590109 Nov 22 19:20 input.tar.gz
[2025-11-23 08:19:45] -rw-r--r-- 2 boinc boinc     15847 Nov 22 19:20 start_atlas.sh
[2025-11-23 08:19:45] -rw------- 1 boinc boinc 904346243 Nov 23 08:18 HITS.pool.root.1
[2025-11-23 08:19:45] -rw------- 1 boinc boinc   8058880 Nov 23 08:19 result.tar.gz
08:19:46 (358863): run_atlas exited; CPU time 184284.988611
08:19:46 (358863): called boinc_finish(0)

</stderr_txt>
]]>

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