Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:02:41 (3913922): wrapper (7.7.26015): starting
18:02:41 (3913922): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 18:02:41] Arguments: --nthreads 4
[2025-11-22 18:02:41] Threads: 4
[2025-11-22 18:02:41] Checking for CVMFS
[2025-11-22 18:02:41] No cvmfs_config command found, will try listing directly
[2025-11-22 18:02:41] CVMFS is ok
[2025-11-22 18:02:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:02:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:02:41] Further information can be found at the LHC@home message board.
[2025-11-22 18:02:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:02:41] Checking for apptainer binary...
[2025-11-22 18:02:41] which: no apptainer in ((null))
[2025-11-22 18:02:41] apptainer is not installed, using version from CVMFS
[2025-11-22 18:02:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:02:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-11-22 18:02:41] apptainer works
[2025-11-22 18:02:41] Set ATHENA_PROC_NUMBER=4
[2025-11-22 18:02:41] Set ATHENA_CORE_NUMBER=4
[2025-11-22 18:02:42] Starting ATLAS job with PandaID=6894266204
[2025-11-22 18:02:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 10:06:19]  *** The last 200 lines of the pilot log: ***
[2025-11-23 10:06:19] 2025-11-23 08:59:54,050 | INFO     | PID=3917705 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-23 10:06:19] 2025-11-23 08:59:54,050 | INFO     | .. there are 3 such processes running
[2025-11-23 10:06:19] 2025-11-23 08:59:54,445 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 10:06:19] 2025-11-23 08:59:54,455 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2583.03103125
[2025-11-23 10:06:19] 2025-11-23 08:59:54,468 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6894266204/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 10:06:19] 2025-11-23 08:59:54,469 | INFO     | extracted standard info from prmon json
[2025-11-23 10:06:19] 2025-11-23 08:59:54,469 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 10:06:19] 2025-11-23 08:59:54,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 10:06:19] 2025-11-23 08:59:54,486 | INFO     | fitting pss+swap vs Time
[2025-11-23 10:06:19] 2025-11-23 08:59:54,487 | INFO     | sum of square deviations: 258372693853.99573
[2025-11-23 10:06:19] 2025-11-23 08:59:54,507 | INFO     | sum of deviations: 1005628912605.8347
[2025-11-23 10:06:19] 2025-11-23 08:59:54,507 | INFO     | mean x: 1763859679.0021255
[2025-11-23 10:06:19] 2025-11-23 08:59:54,507 | INFO     | mean y: 2281714.5834218916
[2025-11-23 10:06:19] 2025-11-23 08:59:54,507 | INFO     | intersect: -6862949531.5115595
[2025-11-23 10:06:19] 2025-11-23 08:59:54,509 | INFO     | chi2: 4.9136116964198155
[2025-11-23 10:06:19] 2025-11-23 08:59:54,510 | INFO     | sum of square deviations: 254275947883.99594
[2025-11-23 10:06:19] 2025-11-23 08:59:54,529 | INFO     | sum of deviations: 1223900604806.185
[2025-11-23 10:06:19] 2025-11-23 08:59:54,530 | INFO     | mean x: 1763859526.5021367
[2025-11-23 10:06:19] 2025-11-23 08:59:54,530 | INFO     | mean y: 2289833.657051282
[2025-11-23 10:06:19] 2025-11-23 08:59:54,530 | INFO     | intersect: -8487654886.808544
[2025-11-23 10:06:19] 2025-11-23 08:59:54,531 | INFO     | chi2: 2.2710922398269897
[2025-11-23 10:06:19] 2025-11-23 08:59:54,531 | INFO     | current chi2=2.2710922398269897 (change=53.779574371296654 %)
[2025-11-23 10:06:19] 2025-11-23 08:59:54,533 | INFO     | sum of square deviations: 250222737613.99542
[2025-11-23 10:06:19] 2025-11-23 08:59:54,552 | INFO     | sum of deviations: 1273249769672.9084
[2025-11-23 10:06:19] 2025-11-23 08:59:54,552 | INFO     | mean x: 1763859374.0021482
[2025-11-23 10:06:19] 2025-11-23 08:59:54,552 | INFO     | mean y: 2291687.046186896
[2025-11-23 10:06:19] 2025-11-23 08:59:54,552 | INFO     | intersect: -8973045898.573858
[2025-11-23 10:06:19] 2025-11-23 08:59:54,554 | INFO     | chi2: 2.025232880895727
[2025-11-23 10:06:19] 2025-11-23 08:59:54,554 | INFO     | current chi2=2.025232880895727 (change=10.82559988624646 %)
[2025-11-23 10:06:19] 2025-11-23 08:59:54,554 | INFO     | right removable region: 930
[2025-11-23 10:06:19] 2025-11-23 08:59:54,555 | INFO     | sum of square deviations: 254275946663.99594
[2025-11-23 10:06:19] 2025-11-23 08:59:54,575 | INFO     | sum of deviations: 823483930180.3065
[2025-11-23 10:06:19] 2025-11-23 08:59:54,575 | INFO     | mean x: 1763859831.5021367
[2025-11-23 10:06:19] 2025-11-23 08:59:54,575 | INFO     | mean y: 2288484.097222222
[2025-11-23 10:06:19] 2025-11-23 08:59:54,575 | INFO     | intersect: -5710049805.815515
[2025-11-23 10:06:19] 2025-11-23 08:59:54,577 | INFO     | chi2: 3.0035177193313927
[2025-11-23 10:06:19] 2025-11-23 08:59:54,577 | INFO     | current chi2=3.0035177193313927 (change=38.87352308445877 %)
[2025-11-23 10:06:19] 2025-11-23 08:59:54,578 | INFO     | sum of square deviations: 250222849730.0
[2025-11-23 10:06:19] 2025-11-23 08:59:54,597 | INFO     | sum of deviations: 786288860458.9999
[2025-11-23 10:06:19] 2025-11-23 08:59:54,597 | INFO     | mean x: 1763859984.0
[2025-11-23 10:06:19] 2025-11-23 08:59:54,598 | INFO     | mean y: 2289883.037593985
[2025-11-23 10:06:19] 2025-11-23 08:59:54,598 | INFO     | intersect: -5540383211.466411
[2025-11-23 10:06:19] 2025-11-23 08:59:54,599 | INFO     | chi2: 2.9772284930015225
[2025-11-23 10:06:19] 2025-11-23 08:59:54,599 | INFO     | current chi2=2.9772284930015225 (change=0.8752812131144138 %)
[2025-11-23 10:06:19] 2025-11-23 08:59:54,599 | INFO     | left removable region: 20
[2025-11-23 10:06:19] 2025-11-23 08:59:54,601 | INFO     | sum of square deviations: 233669525407.5
[2025-11-23 10:06:19] 2025-11-23 08:59:54,619 | INFO     | sum of deviations: 995027426006.4999
[2025-11-23 10:06:19] 2025-11-23 08:59:54,620 | INFO     | mean x: 1763859953.5
[2025-11-23 10:06:19] 2025-11-23 08:59:54,620 | INFO     | mean y: 2302105.6736263735
[2025-11-23 10:06:19] 2025-11-23 08:59:54,620 | INFO     | intersect: -7508686014.434557
[2025-11-23 10:06:19] 2025-11-23 08:59:54,621 | INFO     | chi2: 0.061270796652299564
[2025-11-23 10:06:19] 2025-11-23 08:59:54,621 | INFO     | current memory leak: 4.26 B/s (using 910 data points, chi2=0.06)
[2025-11-23 10:06:19] 2025-11-23 08:59:54,622 | INFO     | could have reported an average CPU frequency of 2698 MHz (35 samples)
[2025-11-23 10:06:19] 2025-11-23 08:59:54,622 | INFO     | ..............................
[2025-11-23 10:06:19] 2025-11-23 08:59:54,623 | INFO     | . Timing measurements:
[2025-11-23 10:06:19] 2025-11-23 08:59:54,623 | INFO     | . get job = 0 s
[2025-11-23 10:06:19] 2025-11-23 08:59:54,623 | INFO     | . initial setup = 1 s
[2025-11-23 10:06:19] 2025-11-23 08:59:54,623 | INFO     | . payload setup = 7 s
[2025-11-23 10:06:19] 2025-11-23 08:59:54,623 | INFO     | . stage-in = 0 s
[2025-11-23 10:06:19] 2025-11-23 08:59:54,623 | INFO     | . payload execution = 57379 s
[2025-11-23 10:06:19] 2025-11-23 08:59:54,623 | INFO     | . stage-out = 2 s
[2025-11-23 10:06:19] 2025-11-23 08:59:54,623 | INFO     | . log creation = 0 s
[2025-11-23 10:06:19] 2025-11-23 08:59:54,623 | INFO     | ..............................
[2025-11-23 10:06:19] 2025-11-23 08:59:55,051 | INFO     | time since job start (57419s) is within the limit (172800.0s)
[2025-11-23 10:06:19] 2025-11-23 08:59:55,180 | INFO     | 
[2025-11-23 10:06:19] 2025-11-23 08:59:55,180 | INFO     | job summary report
[2025-11-23 10:06:19] 2025-11-23 08:59:55,180 | INFO     | --------------------------------------------------
[2025-11-23 10:06:19] 2025-11-23 08:59:55,180 | INFO     | PanDA job id: 6894266204
[2025-11-23 10:06:19] 2025-11-23 08:59:55,180 | INFO     | task id: 47533967
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | errors: (none)
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | pilot state: finished 
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | transexitcode: 0
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | exeerrorcode: 0
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | exeerrordiag: 
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | exitcode: 0
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | exitmsg: OK
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | cpuconsumptiontime: 227144 s
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | nevents: 1000
[2025-11-23 10:06:19] 2025-11-23 08:59:55,181 | INFO     | neventsw: 0
[2025-11-23 10:06:19] 2025-11-23 08:59:55,182 | INFO     | pid: 3924808
[2025-11-23 10:06:19] 2025-11-23 08:59:55,182 | INFO     | pgrp: 3924808
[2025-11-23 10:06:19] 2025-11-23 08:59:55,182 | INFO     | corecount: 4
[2025-11-23 10:06:19] 2025-11-23 08:59:55,182 | INFO     | event service: False
[2025-11-23 10:06:19] 2025-11-23 08:59:55,182 | INFO     | sizes: {0: 2298818, 6: 2299080, 11: 2299108, 57390: 2350426, 57391: 2350425, 57394: 2359681, 57401: 2359871}
[2025-11-23 10:06:19] 2025-11-23 08:59:55,182 | INFO     | --------------------------------------------------
[2025-11-23 10:06:19] 2025-11-23 08:59:55,182 | INFO     | 
[2025-11-23 10:06:19] 2025-11-23 08:59:55,182 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-23 10:06:19] 2025-11-23 08:59:55,203 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,204 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,205 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 10:06:19] 2025-11-23 08:59:55,206 | INFO     | job 6894266204 has completed (purged errors)
[2025-11-23 10:06:19] 2025-11-23 08:59:55,206 | INFO     | overall cleanup function is called
[2025-11-23 10:06:19] 2025-11-23 08:59:56,220 | INFO     | --- collectZombieJob: --- 10, [3924808]
[2025-11-23 10:06:19] 2025-11-23 08:59:56,220 | INFO     | zombie collector waiting for pid 3924808
[2025-11-23 10:06:19] 2025-11-23 08:59:56,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 10:06:19] 2025-11-23 08:59:56,220 | INFO     | collected zombie processes
[2025-11-23 10:06:19] 2025-11-23 08:59:56,220 | INFO     | will attempt to kill all subprocesses of pid=3924808
[2025-11-23 10:06:19] 2025-11-23 08:59:56,619 | INFO     | process IDs to be killed: [3924808] (in reverse order)
[2025-11-23 10:06:19] 2025-11-23 08:59:56,736 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 10:06:19] 2025-11-23 08:59:56,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 10:06:19] 2025-11-23 08:59:56,750 | INFO     | did not find any defunct processes belonging to 3924808
[2025-11-23 10:06:19] 2025-11-23 08:59:56,764 | INFO     | did not find any defunct processes belonging to 3924808
[2025-11-23 10:06:19] 2025-11-23 08:59:56,765 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 10:06:19] 2025-11-23 08:59:56,766 | INFO     | ready for new job
[2025-11-23 10:06:19] 2025-11-23 08:59:56,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 10:06:19] 2025-11-23 08:59:56,771 | INFO     | ***************************************
[2025-11-23 10:06:19] 2025-11-23 08:59:56,771 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 10:06:19] 2025-11-23 08:59:56,771 | INFO     | ***************************************
[2025-11-23 10:06:19] 2025-11-23 08:59:56,772 | INFO     | 
[2025-11-23 10:06:19] 2025-11-23 08:59:56,776 | INFO     | architecture information:
[2025-11-23 10:06:19] 2025-11-23 08:59:56,776 | INFO     | executing command: cat /etc/os-release
[2025-11-23 10:06:19] 2025-11-23 08:59:56,793 | INFO     | cat /etc/os-release:
[2025-11-23 10:06:19] NAME="CentOS Linux"
[2025-11-23 10:06:19] VERSION="7 (Core)"
[2025-11-23 10:06:19] ID="centos"
[2025-11-23 10:06:19] ID_LIKE="rhel fedora"
[2025-11-23 10:06:19] VERSION_ID="7"
[2025-11-23 10:06:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 10:06:19] ANSI_COLOR="0;31"
[2025-11-23 10:06:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 10:06:19] HOME_URL="https://www.centos.org/"
[2025-11-23 10:06:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 10:06:19] 
[2025-11-23 10:06:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 10:06:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 10:06:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 10:06:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 10:06:19] 
[2025-11-23 10:06:19] 2025-11-23 08:59:56,793 | INFO     | ***************************************
[2025-11-23 10:06:19] 2025-11-23 08:59:57,295 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-23 10:06:19] 2025-11-23 08:59:57,313 | INFO     | sufficient remaining disk space (662205104128 B)
[2025-11-23 10:06:19] 2025-11-23 08:59:57,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 10:06:19] 2025-11-23 08:59:57,313 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 10:06:19] 2025-11-23 08:59:57,314 | INFO     | update_server=False
[2025-11-23 10:06:19] 2025-11-23 08:59:57,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 10:06:19] 2025-11-23 08:59:57,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:06:19] 2025-11-23 08:59:57,315 | INFO     | aborting loop
[2025-11-23 10:06:19] 2025-11-23 08:59:57,938 | INFO     | all data control threads have been joined
[2025-11-23 10:06:19] 2025-11-23 08:59:57,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 10:06:19] 2025-11-23 08:59:58,024 | INFO     | all payload control threads have been joined
[2025-11-23 10:06:19] 2025-11-23 08:59:58,142 | INFO     | all job control threads have been joined
[2025-11-23 10:06:19] 2025-11-23 08:59:58,317 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:58,319 | INFO     | [job] retrieve thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:58,320 | INFO     | [job] job monitor thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:58,433 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:58,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 10:06:19] 2025-11-23 08:59:58,796 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:58,797 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:58,942 | INFO     | [data] control thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:59,027 | INFO     | [payload] control thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:59,148 | INFO     | [job] control thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:59,203 | INFO     | [payload] failed_post thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:59,492 | INFO     | [data] copytool_in thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:59,630 | INFO     | [job] validate thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:59,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:06:19] 2025-11-23 08:59:59,909 | INFO     | [payload] validate_post thread has finished
[2025-11-23 10:06:19] 2025-11-23 08:59:59,950 | INFO     | [data] copytool_out thread has finished
[2025-11-23 10:06:19] 2025-11-23 09:00:00,743 | INFO     | [job] queue monitor thread has finished
[2025-11-23 10:06:19] 2025-11-23 09:00:02,738 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 10:06:19] 2025-11-23 09:00:25,887 | INFO     | [monitor] cgroup control has ended
[2025-11-23 10:06:19] 2025-11-23 09:00:26,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22516622325568)>', '<ExcThread(monitor, started 22516386993920)>']
[2025-11-23 10:06:19] 2025-11-23 09:00:28,626 | INFO     | PID=3917705 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 10:06:19] 2025-11-23 09:00:28,627 | INFO     | .. there are 3 such processes running
[2025-11-23 10:06:19] 2025-11-23 09:00:28,627 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 10:06:19] 2025-11-23 09:00:28,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 10:06:19] 2025-11-23 09:00:28,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 10:06:19] 2025-11-23 09:00:28,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 10:06:19] 2025-11-23 09:00:28,628 | INFO     | [monitor] control thread has ended
[2025-11-23 10:06:19] 2025-11-23 09:00:31,957 | INFO     | all workflow threads have been joined
[2025-11-23 10:06:19] 2025-11-23 09:00:31,957 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 10:06:19] 2025-11-23 09:00:31,957 | INFO     | traces error code: 0
[2025-11-23 10:06:19] 2025-11-23 09:00:31,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 10:06:19] 2025-11-23 09:00:32,116 [wrapper] ==== pilot stdout END ====
[2025-11-23 10:06:19] 2025-11-23 09:00:32,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 10:06:19] 2025-11-23 09:00:32,121 [wrapper] pilotpid: 3917705
[2025-11-23 10:06:19] 2025-11-23 09:00:32,124 [wrapper] Pilot exit status: 0
[2025-11-23 10:06:19] 2025-11-23 09:00:32,134 [wrapper] pandaids: 6894266204
[2025-11-23 10:06:19] 2025-11-23 09:00:32,214 [wrapper] cleanup supervisor_pilot  457354 3917706
[2025-11-23 10:06:19] 2025-11-23 09:00:32,218 [wrapper] Test setup, not cleaning
[2025-11-23 10:06:19] 2025-11-23 09:00:32,220 [wrapper] apfmon messages muted
[2025-11-23 10:06:19] 2025-11-23 09:00:32,223 [wrapper] ==== wrapper stdout END ====
[2025-11-23 10:06:19] 2025-11-23 09:00:32,225 [wrapper] ==== wrapper stderr END ====
[2025-11-23 10:06:19]  *** Error codes and diagnostics ***
[2025-11-23 10:06:19]     "exeErrorCode": 0,
[2025-11-23 10:06:19]     "exeErrorDiag": "",
[2025-11-23 10:06:19]     "pilotErrorCode": 0,
[2025-11-23 10:06:19]     "pilotErrorDiag": "",
[2025-11-23 10:06:19]  *** Listing of results directory ***
[2025-11-23 10:06:19] total 1316776
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:12 queuedata.json
[2025-11-23 10:06:19] -rwx------ 1 boinc boinc     36292 Nov 21 06:12 runpilot2-wrapper.sh
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc       100 Nov 22 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 10:06:19] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 18:02 run_atlas
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc       105 Nov 22 18:02 job.xml
[2025-11-23 10:06:19] -rw-r--r-- 2 boinc boinc 411119796 Nov 22 18:02 EVNT.47493127._002225.pool.root.1
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc      6634 Nov 22 18:02 init_data.xml
[2025-11-23 10:06:19] -rw-r--r-- 2 boinc boinc     15847 Nov 22 18:02 start_atlas.sh
[2025-11-23 10:06:19] drwxrwx--x 2 boinc boinc      4096 Nov 22 18:02 shared
[2025-11-23 10:06:19] -rw-r--r-- 2 boinc boinc    590108 Nov 22 18:02 input.tar.gz
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc         0 Nov 22 18:02 boinc_lockfile
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc      2786 Nov 22 18:02 pandaJob.out
[2025-11-23 10:06:19] -rw------- 1 boinc boinc    989768 Nov 22 18:02 agis_schedconf.cvmfs.json
[2025-11-23 10:06:19] drwx------ 5 boinc boinc      4096 Nov 22 18:02 pilot3
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc       531 Nov 23 09:50 boinc_task_state.xml
[2025-11-23 10:06:19] -rw------- 1 boinc boinc 913808067 Nov 23 09:59 HITS.47533967._001963.pool.root.1
[2025-11-23 10:06:19] -rw------- 1 boinc boinc      1045 Nov 23 09:59 memory_monitor_summary.json
[2025-11-23 10:06:19] -rw------- 1 boinc boinc   1526164 Nov 23 09:59 agis_ddmendpoints.agis.ALL.json
[2025-11-23 10:06:19] -rw------- 1 boinc boinc   1700966 Nov 23 09:59 log.47533967._001963.job.log.tgz.1
[2025-11-23 10:06:19] -rw------- 1 boinc boinc      8632 Nov 23 09:59 heartbeat.json
[2025-11-23 10:06:19] -rw------- 1 boinc boinc        95 Nov 23 10:00 pilot_heartbeat.json
[2025-11-23 10:06:19] -rw------- 1 boinc boinc      4833 Nov 23 10:00 pilotlog.txt
[2025-11-23 10:06:19] -rw------- 1 boinc boinc   8062682 Nov 23 10:00 log.47533967._001963.job.log.1
[2025-11-23 10:06:19] -rw------- 1 boinc boinc       353 Nov 23 10:00 output.list
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc       620 Nov 23 10:00 runtime_log
[2025-11-23 10:06:19] -rw------- 1 boinc boinc   9779200 Nov 23 10:00 result.tar.gz
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc      9206 Nov 23 10:00 runtime_log.err
[2025-11-23 10:06:19] -rw------- 1 boinc boinc       670 Nov 23 10:00 RzDMDmYcYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFLHKDmq6CpPm.diag
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc        28 Nov 23 10:06 wrapper_checkpoint.txt
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc      8192 Nov 23 10:06 boinc_mmap_file
[2025-11-23 10:06:19] -rw-r--r-- 1 boinc boinc     21155 Nov 23 10:06 stderr.txt
[2025-11-23 10:06:19] HITS file was successfully produced:
[2025-11-23 10:06:19] -rw------- 1 boinc boinc 913808067 Nov 23 09:59 shared/HITS.pool.root.1
[2025-11-23 10:06:19]  *** Contents of shared directory: ***
[2025-11-23 10:06:19] total 1304036
[2025-11-23 10:06:19] -rw-r--r-- 2 boinc boinc 411119796 Nov 22 18:02 ATLAS.root_0
[2025-11-23 10:06:19] -rw-r--r-- 2 boinc boinc     15847 Nov 22 18:02 start_atlas.sh
[2025-11-23 10:06:19] -rw-r--r-- 2 boinc boinc    590108 Nov 22 18:02 input.tar.gz
[2025-11-23 10:06:19] -rw------- 1 boinc boinc 913808067 Nov 23 09:59 HITS.pool.root.1
[2025-11-23 10:06:19] -rw------- 1 boinc boinc   9779200 Nov 23 10:00 result.tar.gz
10:06:21 (3913922): run_atlas exited; CPU time 229181.482316
10:06:21 (3913922): called boinc_finish(0)

</stderr_txt>
]]>

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