Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:13:22 (384696): wrapper (7.7.26015): starting
21:13:22 (384696): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:13:22] Arguments: --nthreads 8
[2025-11-21 21:13:22] Threads: 8
[2025-11-21 21:13:22] Checking for CVMFS
[2025-11-21 21:13:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:13:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:13:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:13:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:13:23] 2.13.2.0 1687 2966 47364 153143 3 81 2515092 4096001 0 130560 0 1068260 99.973 107073 598 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-21 21:13:23] CVMFS is ok
[2025-11-21 21:13:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 21:13:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 21:13:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 21:13:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 21:13:23] Further information can be found at the LHC@home message board.
[2025-11-21 21:13:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:13:23] Checking for apptainer binary...
[2025-11-21 21:13:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 21:13:23] Running /usr/bin/apptainer --version
[2025-11-21 21:13:23] apptainer version 1.4.3
[2025-11-21 21:13:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:13:23] lab01ubuntu
[2025-11-21 21:13:23] apptainer works
[2025-11-21 21:13:23] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:13:23] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:13:23] Starting ATLAS job with PandaID=6894266250
[2025-11-21 21:13:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 07:23:01]  *** The last 200 lines of the pilot log: ***
[2025-11-22 07:23:01] 2025-11-22 07:21:52,652 | INFO     | time since job start (36477s) is within the limit (172800.0s)
[2025-11-22 07:23:01] 2025-11-22 07:21:54,022 | INFO     | monitor loop #2756: job 0:6894266250 is in state 'finished'
[2025-11-22 07:23:01] 2025-11-22 07:21:54,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 07:23:01] 2025-11-22 07:21:54,659 | INFO     | time since job start (36479s) is within the limit (172800.0s)
[2025-11-22 07:23:01] 2025-11-22 07:21:56,526 | INFO     | monitor loop #2757: job 0:6894266250 is in state 'finished'
[2025-11-22 07:23:01] 2025-11-22 07:21:56,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 07:23:01] 2025-11-22 07:21:56,663 | INFO     | time since job start (36481s) is within the limit (172800.0s)
[2025-11-22 07:23:01] 2025-11-22 07:21:58,670 | INFO     | time since job start (36483s) is within the limit (172800.0s)
[2025-11-22 07:23:01] 2025-11-22 07:21:59,031 | INFO     | monitor loop #2758: job 0:6894266250 is in state 'finished'
[2025-11-22 07:23:01] 2025-11-22 07:21:59,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,192 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 07:23:01] 2025-11-22 07:22:00,195 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 2893.0279999999993
[2025-11-22 07:23:01] 2025-11-22 07:22:00,198 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6894266250/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,201 | INFO     | extracted standard info from prmon json
[2025-11-22 07:23:01] 2025-11-22 07:22:00,201 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 07:23:01] 2025-11-22 07:22:00,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 07:23:01] 2025-11-22 07:22:00,222 | INFO     | fitting pss+swap vs Time
[2025-11-22 07:23:01] 2025-11-22 07:22:00,224 | INFO     | sum of square deviations: 65978159858.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,242 | INFO     | sum of deviations: 691871357888.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,242 | INFO     | mean x: 1763777875.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,243 | INFO     | mean y: 2852635.0452261306
[2025-11-22 07:23:01] 2025-11-22 07:22:00,243 | INFO     | intersect: -18492773736.096985
[2025-11-22 07:23:01] 2025-11-22 07:22:00,244 | INFO     | chi2: 12.75296728327315
[2025-11-22 07:23:01] 2025-11-22 07:22:00,246 | INFO     | sum of square deviations: 64334259268.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,263 | INFO     | sum of deviations: 877232720500.5
[2025-11-22 07:23:01] 2025-11-22 07:22:00,264 | INFO     | mean x: 1763777722.5
[2025-11-22 07:23:01] 2025-11-22 07:22:00,264 | INFO     | mean y: 2869834.9746621624
[2025-11-22 07:23:01] 2025-11-22 07:22:00,264 | INFO     | intersect: -24047201580.652145
[2025-11-22 07:23:01] 2025-11-22 07:22:00,266 | INFO     | chi2: 9.949450543168586
[2025-11-22 07:23:01] 2025-11-22 07:22:00,266 | INFO     | current chi2=9.949450543168586 (change=21.983250468945133 %)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,266 | INFO     | right removable region: 591
[2025-11-22 07:23:01] 2025-11-22 07:22:00,268 | INFO     | sum of square deviations: 64334259268.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,285 | INFO     | sum of deviations: 479347898043.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,285 | INFO     | mean x: 1763778027.5
[2025-11-22 07:23:01] 2025-11-22 07:22:00,286 | INFO     | mean y: 2872340.6114864866
[2025-11-22 07:23:01] 2025-11-22 07:22:00,286 | INFO     | intersect: -13138854939.943197
[2025-11-22 07:23:01] 2025-11-22 07:22:00,287 | INFO     | chi2: 9.33413582799838
[2025-11-22 07:23:01] 2025-11-22 07:22:00,288 | INFO     | current chi2=9.33413582799838 (change=26.808125351022618 %)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,289 | INFO     | sum of square deviations: 62717894078.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,305 | INFO     | sum of deviations: 311993373181.99976
[2025-11-22 07:23:01] 2025-11-22 07:22:00,305 | INFO     | mean x: 1763778180.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,306 | INFO     | mean y: 2888127.180579216
[2025-11-22 07:23:01] 2025-11-22 07:22:00,306 | INFO     | intersect: -8771116676.594175
[2025-11-22 07:23:01] 2025-11-22 07:22:00,308 | INFO     | chi2: 7.353774042966501
[2025-11-22 07:23:01] 2025-11-22 07:22:00,308 | INFO     | current chi2=7.353774042966501 (change=21.21633776842682 %)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,309 | INFO     | left removable region: 20
[2025-11-22 07:23:01] 2025-11-22 07:22:00,310 | INFO     | sum of square deviations: 57727854470.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,326 | INFO     | sum of deviations: 372468272127.99994
[2025-11-22 07:23:01] 2025-11-22 07:22:00,326 | INFO     | mean x: 1763778302.0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,327 | INFO     | mean y: 2927835.6339754816
[2025-11-22 07:23:01] 2025-11-22 07:22:00,327 | INFO     | intersect: -11377218933.967552
[2025-11-22 07:23:01] 2025-11-22 07:22:00,328 | INFO     | chi2: 2.0703370139165207
[2025-11-22 07:23:01] 2025-11-22 07:22:00,329 | INFO     | current memory leak: 6.45 B/s (using 571 data points, chi2=2.07)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,330 | INFO     | could have reported an average CPU frequency of 2893 MHz (24 samples)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,331 | INFO     | ..............................
[2025-11-22 07:23:01] 2025-11-22 07:22:00,331 | INFO     | . Timing measurements:
[2025-11-22 07:23:01] 2025-11-22 07:22:00,332 | INFO     | . get job = 0 s
[2025-11-22 07:23:01] 2025-11-22 07:22:00,332 | INFO     | . initial setup = 4 s
[2025-11-22 07:23:01] 2025-11-22 07:22:00,332 | INFO     | . payload setup = 18 s
[2025-11-22 07:23:01] 2025-11-22 07:22:00,332 | INFO     | . stage-in = 0 s
[2025-11-22 07:23:01] 2025-11-22 07:22:00,333 | INFO     | . payload execution = 36410 s
[2025-11-22 07:23:01] 2025-11-22 07:22:00,333 | INFO     | . stage-out = 4 s
[2025-11-22 07:23:01] 2025-11-22 07:22:00,333 | INFO     | . log creation = 0 s
[2025-11-22 07:23:01] 2025-11-22 07:22:00,333 | INFO     | ..............................
[2025-11-22 07:23:01] 2025-11-22 07:22:00,426 | INFO     | 
[2025-11-22 07:23:01] 2025-11-22 07:22:00,427 | INFO     | job summary report
[2025-11-22 07:23:01] 2025-11-22 07:22:00,427 | INFO     | --------------------------------------------------
[2025-11-22 07:23:01] 2025-11-22 07:22:00,427 | INFO     | PanDA job id: 6894266250
[2025-11-22 07:23:01] 2025-11-22 07:22:00,428 | INFO     | task id: 47533967
[2025-11-22 07:23:01] 2025-11-22 07:22:00,428 | INFO     | errors: (none)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 07:23:01] 2025-11-22 07:22:00,429 | INFO     | pilot state: finished 
[2025-11-22 07:23:01] 2025-11-22 07:22:00,429 | INFO     | transexitcode: 0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,429 | INFO     | exeerrorcode: 0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,429 | INFO     | exeerrordiag: 
[2025-11-22 07:23:01] 2025-11-22 07:22:00,430 | INFO     | exitcode: 0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,430 | INFO     | exitmsg: OK
[2025-11-22 07:23:01] 2025-11-22 07:22:00,430 | INFO     | cpuconsumptiontime: 277571 s
[2025-11-22 07:23:01] 2025-11-22 07:22:00,430 | INFO     | nevents: 1000
[2025-11-22 07:23:01] 2025-11-22 07:22:00,431 | INFO     | neventsw: 0
[2025-11-22 07:23:01] 2025-11-22 07:22:00,431 | INFO     | pid: 394847
[2025-11-22 07:23:01] 2025-11-22 07:22:00,431 | INFO     | pgrp: 394847
[2025-11-22 07:23:01] 2025-11-22 07:22:00,431 | INFO     | corecount: 8
[2025-11-22 07:23:01] 2025-11-22 07:22:00,432 | INFO     | event service: False
[2025-11-22 07:23:01] 2025-11-22 07:22:00,432 | INFO     | sizes: {0: 2298643, 1: 2298842, 12: 2298842, 19: 2299132, 23: 2299160, 36432: 2341740, 36438: 2350804, 36451: 2350994}
[2025-11-22 07:23:01] 2025-11-22 07:22:00,432 | INFO     | --------------------------------------------------
[2025-11-22 07:23:01] 2025-11-22 07:22:00,433 | INFO     | 
[2025-11-22 07:23:01] 2025-11-22 07:22:00,433 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-11-22 07:23:01] 2025-11-22 07:22:00,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,483 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,483 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,483 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,486 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 07:23:01] 2025-11-22 07:22:00,487 | INFO     | job 6894266250 has completed (purged errors)
[2025-11-22 07:23:01] 2025-11-22 07:22:00,488 | INFO     | overall cleanup function is called
[2025-11-22 07:23:01] 2025-11-22 07:22:01,518 | INFO     | --- collectZombieJob: --- 10, [394847]
[2025-11-22 07:23:01] 2025-11-22 07:22:01,519 | INFO     | zombie collector waiting for pid 394847
[2025-11-22 07:23:01] 2025-11-22 07:22:01,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 07:23:01] 2025-11-22 07:22:01,520 | INFO     | collected zombie processes
[2025-11-22 07:23:01] 2025-11-22 07:22:01,520 | INFO     | will attempt to kill all subprocesses of pid=394847
[2025-11-22 07:23:01] 2025-11-22 07:22:01,694 | INFO     | process IDs to be killed: [394847] (in reverse order)
[2025-11-22 07:23:01] 2025-11-22 07:22:01,810 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 07:23:01] 2025-11-22 07:22:01,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 07:23:01] 2025-11-22 07:22:01,816 | INFO     | did not find any defunct processes belonging to 394847
[2025-11-22 07:23:01] 2025-11-22 07:22:01,821 | INFO     | did not find any defunct processes belonging to 394847
[2025-11-22 07:23:01] 2025-11-22 07:22:01,825 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 07:23:01] 2025-11-22 07:22:01,826 | INFO     | ready for new job
[2025-11-22 07:23:01] 2025-11-22 07:22:01,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 07:23:01] 2025-11-22 07:22:01,832 | INFO     | ***************************************
[2025-11-22 07:23:01] 2025-11-22 07:22:01,833 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 07:23:01] 2025-11-22 07:22:01,833 | INFO     | ***************************************
[2025-11-22 07:23:01] 2025-11-22 07:22:01,833 | INFO     | 
[2025-11-22 07:23:01] 2025-11-22 07:22:01,834 | INFO     | pilot is running in a VM
[2025-11-22 07:23:01] 2025-11-22 07:22:01,835 | INFO     | architecture information:
[2025-11-22 07:23:01] 2025-11-22 07:22:01,836 | INFO     | executing command: cat /etc/os-release
[2025-11-22 07:23:01] 2025-11-22 07:22:01,867 | INFO     | cat /etc/os-release:
[2025-11-22 07:23:01] NAME="CentOS Linux"
[2025-11-22 07:23:01] VERSION="7 (Core)"
[2025-11-22 07:23:01] ID="centos"
[2025-11-22 07:23:01] ID_LIKE="rhel fedora"
[2025-11-22 07:23:01] VERSION_ID="7"
[2025-11-22 07:23:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 07:23:01] ANSI_COLOR="0;31"
[2025-11-22 07:23:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 07:23:01] HOME_URL="https://www.centos.org/"
[2025-11-22 07:23:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 07:23:01] 
[2025-11-22 07:23:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 07:23:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 07:23:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 07:23:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 07:23:01] 
[2025-11-22 07:23:01] 2025-11-22 07:22:01,868 | INFO     | ***************************************
[2025-11-22 07:23:01] 2025-11-22 07:22:02,372 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-11-22 07:23:01] 2025-11-22 07:22:02,404 | INFO     | sufficient remaining disk space (15219032064 B)
[2025-11-22 07:23:01] 2025-11-22 07:22:02,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 07:23:01] 2025-11-22 07:22:02,406 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 07:23:01] 2025-11-22 07:22:02,406 | INFO     | update_server=False
[2025-11-22 07:23:01] 2025-11-22 07:22:02,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 07:23:01] 2025-11-22 07:22:02,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:23:01] 2025-11-22 07:22:02,494 | INFO     | all payload control threads have been joined
[2025-11-22 07:23:01] 2025-11-22 07:22:02,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:23:01] 2025-11-22 07:22:02,541 | INFO     | aborting loop
[2025-11-22 07:23:01] 2025-11-22 07:22:02,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 07:23:01] 2025-11-22 07:22:02,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 07:23:01] 2025-11-22 07:22:03,304 | INFO     | all data control threads have been joined
[2025-11-22 07:23:01] 2025-11-22 07:22:03,412 | INFO     | [job] retrieve thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:03,414 | INFO     | [job] queue monitor thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:03,498 | INFO     | [payload] control thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:03,547 | INFO     | [job] job monitor thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:03,554 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:03,630 | INFO     | [payload] failed_post thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:03,693 | INFO     | [data] copytool_in thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:03,928 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:04,033 | INFO     | all job control threads have been joined
[2025-11-22 07:23:01] 2025-11-22 07:22:04,246 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:04,310 | INFO     | [data] control thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:04,640 | INFO     | [job] validate thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:04,803 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:04,895 | INFO     | [payload] validate_post thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:04,936 | INFO     | [data] copytool_out thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:05,038 | INFO     | [job] control thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:06,615 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 07:23:01] 2025-11-22 07:22:31,876 | INFO     | PID=388426 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 07:23:01] 2025-11-22 07:22:31,877 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 07:23:01] 2025-11-22 07:22:31,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 07:23:01] 2025-11-22 07:22:31,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 07:23:01] 2025-11-22 07:22:54,841 | INFO     | [monitor] cgroup control has ended
[2025-11-22 07:23:01] 2025-11-22 07:22:56,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136630154528576)>', '<ExcThread(monitor, started 136629217916672)>']
[2025-11-22 07:23:01] 2025-11-22 07:22:57,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 07:23:01] 2025-11-22 07:22:57,007 | INFO     | [monitor] control thread has ended
[2025-11-22 07:23:01] 2025-11-22 07:23:01,083 | INFO     | all workflow threads have been joined
[2025-11-22 07:23:01] 2025-11-22 07:23:01,084 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 07:23:01] 2025-11-22 07:23:01,085 | INFO     | traces error code: 0
[2025-11-22 07:23:01] 2025-11-22 07:23:01,085 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 07:23:01] 2025-11-22 07:23:01,279 [wrapper] ==== pilot stdout END ====
[2025-11-22 07:23:01] 2025-11-22 07:23:01,287 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 07:23:01] 2025-11-22 07:23:01,296 [wrapper] pilotpid: 388426
[2025-11-22 07:23:01] 2025-11-22 07:23:01,305 [wrapper] Pilot exit status: 0
[2025-11-22 07:23:01] 2025-11-22 07:23:01,332 [wrapper] pandaids: 6894266250
[2025-11-22 07:23:01] 2025-11-22 07:23:01,412 [wrapper] cleanup supervisor_pilot  458534 388427
[2025-11-22 07:23:01] 2025-11-22 07:23:01,421 [wrapper] Test setup, not cleaning
[2025-11-22 07:23:01] 2025-11-22 07:23:01,430 [wrapper] apfmon messages muted
[2025-11-22 07:23:01] 2025-11-22 07:23:01,439 [wrapper] ==== wrapper stdout END ====
[2025-11-22 07:23:01] 2025-11-22 07:23:01,448 [wrapper] ==== wrapper stderr END ====
[2025-11-22 07:23:01]  *** Error codes and diagnostics ***
[2025-11-22 07:23:01]     "exeErrorCode": 0,
[2025-11-22 07:23:01]     "exeErrorDiag": "",
[2025-11-22 07:23:01]     "pilotErrorCode": 0,
[2025-11-22 07:23:01]     "pilotErrorDiag": "",
[2025-11-22 07:23:01]  *** Listing of results directory ***
[2025-11-22 07:23:01] total 1318080
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc    576529 Nov 21 05:09 pilot3.tar.gz
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc      5112 Nov 21 05:09 queuedata.json
[2025-11-22 07:23:01] -rwx------ 1 boinc boinc     36292 Nov 21 05:10 runpilot2-wrapper.sh
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc       100 Nov 21 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 07:23:01] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 21:13 run_atlas
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc       105 Nov 21 21:13 job.xml
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc      6315 Nov 21 21:13 init_data.xml
[2025-11-22 07:23:01] -rw-r--r-- 2 boinc boinc 411484003 Nov 21 21:13 EVNT.47493127._002229.pool.root.1
[2025-11-22 07:23:01] -rw-r--r-- 2 boinc boinc     15847 Nov 21 21:13 start_atlas.sh
[2025-11-22 07:23:01] drwxrwx--x 2 boinc boinc      4096 Nov 21 21:13 shared
[2025-11-22 07:23:01] -rw-r--r-- 2 boinc boinc    590108 Nov 21 21:13 input.tar.gz
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc         0 Nov 21 21:13 boinc_lockfile
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc      2786 Nov 21 21:13 pandaJob.out
[2025-11-22 07:23:01] -rw------- 1 boinc boinc    989798 Nov 21 21:13 agis_schedconf.cvmfs.json
[2025-11-22 07:23:01] drwx------ 5 boinc boinc      4096 Nov 21 21:13 pilot3
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc       532 Nov 22 07:06 boinc_task_state.xml
[2025-11-22 07:23:01] -rw------- 1 boinc boinc 920218020 Nov 22 07:21 HITS.47533967._002009.pool.root.1
[2025-11-22 07:23:01] -rw------- 1 boinc boinc      1032 Nov 22 07:21 memory_monitor_summary.json
[2025-11-22 07:23:01] -rw------- 1 boinc boinc   1526164 Nov 22 07:21 agis_ddmendpoints.agis.ALL.json
[2025-11-22 07:23:01] -rw------- 1 boinc boinc   1872805 Nov 22 07:21 log.47533967._002009.job.log.tgz.1
[2025-11-22 07:23:01] -rw------- 1 boinc boinc      8588 Nov 22 07:22 heartbeat.json
[2025-11-22 07:23:01] -rw------- 1 boinc boinc        95 Nov 22 07:22 pilot_heartbeat.json
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc      8192 Nov 22 07:22 boinc_mmap_file
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc        29 Nov 22 07:23 wrapper_checkpoint.txt
[2025-11-22 07:23:01] -rw------- 1 boinc boinc      4816 Nov 22 07:23 pilotlog.txt
[2025-11-22 07:23:01] -rw------- 1 boinc boinc   5169937 Nov 22 07:23 log.47533967._002009.job.log.1
[2025-11-22 07:23:01] -rw------- 1 boinc boinc       353 Nov 22 07:23 output.list
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc       620 Nov 22 07:23 runtime_log
[2025-11-22 07:23:01] -rw------- 1 boinc boinc   7065600 Nov 22 07:23 result.tar.gz
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc      8904 Nov 22 07:23 runtime_log.err
[2025-11-22 07:23:01] -rw------- 1 boinc boinc       656 Nov 22 07:23 l5OMDmZaYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm24IKDmyP4oHm.diag
[2025-11-22 07:23:01] -rw-r--r-- 1 boinc boinc     21653 Nov 22 07:23 stderr.txt
[2025-11-22 07:23:01] HITS file was successfully produced:
[2025-11-22 07:23:01] -rw------- 1 boinc boinc 920218020 Nov 22 07:21 shared/HITS.pool.root.1
[2025-11-22 07:23:01]  *** Contents of shared directory: ***
[2025-11-22 07:23:01] total 1307996
[2025-11-22 07:23:01] -rw-r--r-- 2 boinc boinc 411484003 Nov 21 21:13 ATLAS.root_0
[2025-11-22 07:23:01] -rw-r--r-- 2 boinc boinc     15847 Nov 21 21:13 start_atlas.sh
[2025-11-22 07:23:01] -rw-r--r-- 2 boinc boinc    590108 Nov 21 21:13 input.tar.gz
[2025-11-22 07:23:01] -rw------- 1 boinc boinc 920218020 Nov 22 07:21 HITS.pool.root.1
[2025-11-22 07:23:01] -rw------- 1 boinc boinc   7065600 Nov 22 07:23 result.tar.gz
07:23:03 (384696): run_atlas exited; CPU time 277220.193915
07:23:03 (384696): called boinc_finish(0)

</stderr_txt>
]]>

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