Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:11:52 (2419098): wrapper (7.7.26015): starting
16:11:52 (2419098): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 16:11:53] Arguments: --nthreads 8
[2025-11-21 16:11:53] Threads: 8
[2025-11-21 16:11:53] Checking for CVMFS
[2025-11-21 16:11:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 16:11:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 16:11:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 16:11:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 16:11:55] 2.13.3.0 9438 23351 236080 153143 0 304 33631309 40960001 48265 16776704 0 309430598 99.754 183799133 48609 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-21 16:11:55] CVMFS is ok
[2025-11-21 16:11:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 16:11:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 16:11:55] Further information can be found at the LHC@home message board.
[2025-11-21 16:11:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 16:11:55] Checking for apptainer binary...
[2025-11-21 16:11:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 16:11:55] Running /usr/bin/apptainer --version
[2025-11-21 16:11:55] apptainer version 1.4.4-1.el9
[2025-11-21 16:11:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 16:11:56] c8-7-3.aglt2.org
[2025-11-21 16:11:56] apptainer works
[2025-11-21 16:11:56] Set ATHENA_PROC_NUMBER=8
[2025-11-21 16:11:56] Set ATHENA_CORE_NUMBER=8
[2025-11-21 16:11:56] Starting ATLAS job with PandaID=6894238060
[2025-11-21 16:11:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 23:58:18]  *** The last 200 lines of the pilot log: ***
[2025-11-21 23:58:18] 2025-11-22 04:57:21,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:58:18] 2025-11-22 04:57:22,734 | INFO     | time since job start (27843s) is within the limit (172800.0s)
[2025-11-21 23:58:18] 2025-11-22 04:57:24,125 | INFO     | monitor loop #1585: job 0:6894238060 is in state 'finished'
[2025-11-21 23:58:18] 2025-11-22 04:57:24,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:58:18] 2025-11-22 04:57:26,069 | INFO     | PID=2432830 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 23:58:18] 2025-11-22 04:57:26,069 | INFO     | .. there are 103 such processes running
[2025-11-21 23:58:18] 2025-11-22 04:57:26,631 | INFO     | monitor loop #1586: job 0:6894238060 is in state 'finished'
[2025-11-21 23:58:18] 2025-11-22 04:57:26,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:58:18] 2025-11-22 04:57:27,082 | INFO     | time since job start (27848s) is within the limit (172800.0s)
[2025-11-21 23:58:18] 2025-11-22 04:57:29,090 | INFO     | time since job start (27850s) is within the limit (172800.0s)
[2025-11-21 23:58:18] 2025-11-22 04:57:29,136 | INFO     | monitor loop #1587: job 0:6894238060 is in state 'finished'
[2025-11-21 23:58:18] 2025-11-22 04:57:29,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:58:18] 2025-11-22 04:57:31,126 | INFO     | time since job start (27852s) is within the limit (172800.0s)
[2025-11-21 23:58:18] 2025-11-22 04:57:31,645 | INFO     | monitor loop #1588: job 0:6894238060 is in state 'finished'
[2025-11-21 23:58:18] 2025-11-22 04:57:31,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:58:18] 2025-11-22 04:57:32,799 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 23:58:18] 2025-11-22 04:57:32,810 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1361171874973
[2025-11-21 23:58:18] 2025-11-22 04:57:32,897 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6894238060/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 23:58:18] 2025-11-22 04:57:32,897 | INFO     | extracted standard info from prmon json
[2025-11-21 23:58:18] 2025-11-22 04:57:32,897 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 23:58:18] 2025-11-22 04:57:32,897 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 23:58:18] 2025-11-22 04:57:32,929 | INFO     | fitting pss+swap vs Time
[2025-11-21 23:58:18] 2025-11-22 04:57:32,929 | INFO     | sum of square deviations: 28824483401.44788
[2025-11-21 23:58:18] 2025-11-22 04:57:32,936 | INFO     | sum of deviations: 367627865937.13965
[2025-11-21 23:58:18] 2025-11-22 04:57:32,936 | INFO     | mean x: 1763773568.0750551
[2025-11-21 23:58:18] 2025-11-22 04:57:32,936 | INFO     | mean y: 2771263.437086093
[2025-11-21 23:58:18] 2025-11-22 04:57:32,936 | INFO     | intersect: -22492421583.46044
[2025-11-21 23:58:18] 2025-11-22 04:57:32,937 | INFO     | chi2: 19.079797913729948
[2025-11-21 23:58:18] 2025-11-22 04:57:32,937 | INFO     | sum of square deviations: 27880651440.604935
[2025-11-21 23:58:18] 2025-11-22 04:57:32,962 | INFO     | sum of deviations: 514845634771.4197
[2025-11-21 23:58:18] 2025-11-22 04:57:32,962 | INFO     | mean x: 1763773415.5870535
[2025-11-21 23:58:18] 2025-11-22 04:57:32,962 | INFO     | mean y: 2795038.348214286
[2025-11-21 23:58:18] 2025-11-22 04:57:32,962 | INFO     | intersect: -32567141344.78706
[2025-11-21 23:58:18] 2025-11-22 04:57:32,962 | INFO     | chi2: 15.664337978111085
[2025-11-21 23:58:18] 2025-11-22 04:57:32,962 | INFO     | current chi2=15.664337978111085 (change=17.900923013241535 %)
[2025-11-21 23:58:18] 2025-11-22 04:57:32,962 | INFO     | right removable region: 447
[2025-11-21 23:58:18] 2025-11-22 04:57:32,963 | INFO     | sum of square deviations: 27880354370.604935
[2025-11-21 23:58:18] 2025-11-22 04:57:32,969 | INFO     | sum of deviations: 186358142287.28403
[2025-11-21 23:58:18] 2025-11-22 04:57:32,970 | INFO     | mean x: 1763773720.5870535
[2025-11-21 23:58:18] 2025-11-22 04:57:32,970 | INFO     | mean y: 2800537.979910714
[2025-11-21 23:58:18] 2025-11-22 04:57:32,970 | INFO     | intersect: -11786633326.97432
[2025-11-21 23:58:18] 2025-11-22 04:57:32,970 | INFO     | chi2: 14.450087674273984
[2025-11-21 23:58:18] 2025-11-22 04:57:32,970 | INFO     | current chi2=14.450087674273984 (change=24.264985721491282 %)
[2025-11-21 23:58:18] 2025-11-22 04:57:32,970 | INFO     | left removable region: 10
[2025-11-21 23:58:18] 2025-11-22 04:57:32,970 | INFO     | sum of square deviations: 25876647890.279278
[2025-11-21 23:58:18] 2025-11-22 04:57:32,979 | INFO     | sum of deviations: 207953170176.50314
[2025-11-21 23:58:18] 2025-11-22 04:57:32,979 | INFO     | mean x: 1763773690.1144164
[2025-11-21 23:58:18] 2025-11-22 04:57:33,039 | INFO     | mean y: 2857196.1899313503
[2025-11-21 23:58:18] 2025-11-22 04:57:33,039 | INFO     | intersect: -14171402618.621174
[2025-11-21 23:58:18] 2025-11-22 04:57:33,039 | INFO     | chi2: 6.765689685208294
[2025-11-21 23:58:18] 2025-11-22 04:57:33,039 | INFO     | current memory leak: 8.04 B/s (using 437 data points, chi2=6.77)
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | could have reported an average CPU frequency of 3800 MHz (18 samples)
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | ..............................
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | . Timing measurements:
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | . get job = 0 s
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | . initial setup = 6 s
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | . payload setup = 53 s
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | . stage-in = 0 s
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | . payload execution = 27634 s
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | . stage-out = 5 s
[2025-11-21 23:58:18] 2025-11-22 04:57:33,040 | INFO     | . log creation = 1 s
[2025-11-21 23:58:18] 2025-11-22 04:57:33,041 | INFO     | ..............................
[2025-11-21 23:58:18] 2025-11-22 04:57:33,220 | INFO     | time since job start (27854s) is within the limit (172800.0s)
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | 
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | job summary report
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | --------------------------------------------------
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | PanDA job id: 6894238060
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | task id: 47533967
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | errors: (none)
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | pilot state: finished 
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | transexitcode: 0
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | exeerrorcode: 0
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | exeerrordiag: 
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | exitcode: 0
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | exitmsg: OK
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | cpuconsumptiontime: 132195 s
[2025-11-21 23:58:18] 2025-11-22 04:57:33,390 | INFO     | nevents: 1000
[2025-11-21 23:58:18] 2025-11-22 04:57:33,391 | INFO     | neventsw: 0
[2025-11-21 23:58:18] 2025-11-22 04:57:33,391 | INFO     | pid: 2474319
[2025-11-21 23:58:18] 2025-11-22 04:57:33,391 | INFO     | pgrp: 2474319
[2025-11-21 23:58:18] 2025-11-22 04:57:33,391 | INFO     | corecount: 8
[2025-11-21 23:58:18] 2025-11-22 04:57:33,391 | INFO     | event service: False
[2025-11-21 23:58:18] 2025-11-22 04:57:33,391 | INFO     | sizes: {0: 2298633, 1: 2298832, 12: 2298832, 23: 2298860, 34: 2298888, 36: 2299178, 44: 2299334, 27689: 2336459, 27690: 2336458, 27696: 2345508, 27698: 2345564, 27
[2025-11-21 23:58:18] 2025-11-22 04:57:33,391 | INFO     | --------------------------------------------------
[2025-11-21 23:58:18] 2025-11-22 04:57:33,391 | INFO     | 
[2025-11-21 23:58:18] 2025-11-22 04:57:33,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-21 23:58:18] 2025-11-22 04:57:33,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,479 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,480 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,480 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,480 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,480 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 23:58:18] 2025-11-22 04:57:33,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 23:58:18] 2025-11-22 04:57:33,483 | INFO     | job 6894238060 has completed (purged errors)
[2025-11-21 23:58:18] 2025-11-22 04:57:33,484 | INFO     | overall cleanup function is called
[2025-11-21 23:58:18] 2025-11-22 04:57:34,580 | INFO     | --- collectZombieJob: --- 10, [2474319]
[2025-11-21 23:58:18] 2025-11-22 04:57:34,580 | INFO     | zombie collector waiting for pid 2474319
[2025-11-21 23:58:18] 2025-11-22 04:57:34,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 23:58:18] 2025-11-22 04:57:34,580 | INFO     | collected zombie processes
[2025-11-21 23:58:18] 2025-11-22 04:57:34,580 | INFO     | will attempt to kill all subprocesses of pid=2474319
[2025-11-21 23:58:18] 2025-11-22 04:57:36,564 | INFO     | process IDs to be killed: [2474319] (in reverse order)
[2025-11-21 23:58:18] 2025-11-22 04:57:37,373 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 23:58:18] 2025-11-22 04:57:37,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 23:58:18] 2025-11-22 04:57:37,444 | INFO     | did not find any defunct processes belonging to 2474319
[2025-11-21 23:58:18] 2025-11-22 04:57:37,486 | INFO     | did not find any defunct processes belonging to 2474319
[2025-11-21 23:58:18] 2025-11-22 04:57:37,512 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 23:58:18] 2025-11-22 04:57:37,512 | INFO     | ready for new job
[2025-11-21 23:58:18] 2025-11-22 04:57:37,512 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 23:58:18] 2025-11-22 04:57:37,514 | INFO     | ***************************************
[2025-11-21 23:58:18] 2025-11-22 04:57:37,518 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 23:58:18] 2025-11-22 04:57:37,518 | INFO     | ***************************************
[2025-11-21 23:58:18] 2025-11-22 04:57:37,518 | INFO     | 
[2025-11-21 23:58:18] 2025-11-22 04:57:37,523 | INFO     | architecture information:
[2025-11-21 23:58:18] 2025-11-22 04:57:37,523 | INFO     | executing command: cat /etc/os-release
[2025-11-21 23:58:18] 2025-11-22 04:57:37,594 | INFO     | cat /etc/os-release:
[2025-11-21 23:58:18] NAME="CentOS Linux"
[2025-11-21 23:58:18] VERSION="7 (Core)"
[2025-11-21 23:58:18] ID="centos"
[2025-11-21 23:58:18] ID_LIKE="rhel fedora"
[2025-11-21 23:58:18] VERSION_ID="7"
[2025-11-21 23:58:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 23:58:18] ANSI_COLOR="0;31"
[2025-11-21 23:58:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 23:58:18] HOME_URL="https://www.centos.org/"
[2025-11-21 23:58:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 23:58:18] 
[2025-11-21 23:58:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 23:58:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 23:58:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 23:58:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 23:58:18] 
[2025-11-21 23:58:18] 2025-11-22 04:57:37,594 | INFO     | ***************************************
[2025-11-21 23:58:18] 2025-11-22 04:57:38,098 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-21 23:58:18] 2025-11-22 04:57:38,147 | INFO     | sufficient remaining disk space (157239214080 B)
[2025-11-21 23:58:18] 2025-11-22 04:57:38,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 23:58:18] 2025-11-22 04:57:38,148 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 23:58:18] 2025-11-22 04:57:38,148 | INFO     | update_server=False
[2025-11-21 23:58:18] 2025-11-22 04:57:38,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 23:58:18] 2025-11-22 04:57:38,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:58:18] 2025-11-22 04:57:38,148 | INFO     | aborting loop
[2025-11-21 23:58:18] 2025-11-22 04:57:38,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 23:58:18] 2025-11-22 04:57:38,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 23:58:18] 2025-11-22 04:57:38,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:58:18] 2025-11-22 04:57:39,040 | INFO     | all payload control threads have been joined
[2025-11-21 23:58:18] 2025-11-22 04:57:39,157 | INFO     | [job] retrieve thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:39,167 | INFO     | [job] job monitor thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:39,213 | INFO     | all data control threads have been joined
[2025-11-21 23:58:18] 2025-11-22 04:57:39,217 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:39,360 | INFO     | all job control threads have been joined
[2025-11-21 23:58:18] 2025-11-22 04:57:39,430 | INFO     | [job] queue monitor thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:39,627 | INFO     | [job] validate thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:39,645 | INFO     | [data] copytool_in thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:39,925 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:39,929 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:40,048 | INFO     | [payload] control thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:40,165 | INFO     | [data] copytool_out thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:40,219 | INFO     | [data] control thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:40,243 | INFO     | [payload] validate_post thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:40,368 | INFO     | [job] control thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:40,562 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:40,744 | INFO     | [payload] failed_post thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:57:42,173 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 23:58:18] 2025-11-22 04:58:08,391 | INFO     | [monitor] cgroup control has ended
[2025-11-21 23:58:18] 2025-11-22 04:58:08,694 | INFO     | PID=2432830 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 23:58:18] 2025-11-22 04:58:08,694 | INFO     | .. there are 103 such processes running
[2025-11-21 23:58:18] 2025-11-22 04:58:08,694 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 23:58:18] 2025-11-22 04:58:08,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 23:58:18] 2025-11-22 04:58:08,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 23:58:18] 2025-11-22 04:58:09,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140344504346432)>', '<ExcThread(monitor, started 140344029083392)>']
[2025-11-21 23:58:18] 2025-11-22 04:58:09,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 23:58:18] 2025-11-22 04:58:09,701 | INFO     | [monitor] control thread has ended
[2025-11-21 23:58:18] 2025-11-22 04:58:12,054 [wrapper] supervise_pilot (15 min periods counter: 32)
[2025-11-21 23:58:18] 2025-11-22 04:58:14,434 | INFO     | all workflow threads have been joined
[2025-11-21 23:58:18] 2025-11-22 04:58:14,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 23:58:18] 2025-11-22 04:58:14,437 | INFO     | traces error code: 0
[2025-11-21 23:58:18] 2025-11-22 04:58:14,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 23:58:18] 2025-11-22 04:58:15,046 [wrapper] ==== pilot stdout END ====
[2025-11-21 23:58:18] 2025-11-22 04:58:15,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 23:58:18] 2025-11-22 04:58:15,063 [wrapper] pilotpid: 2432830
[2025-11-21 23:58:18] 2025-11-22 04:58:15,140 [wrapper] Pilot exit status: 0
[2025-11-21 23:58:18] 2025-11-22 04:58:15,310 [wrapper] pandaids: 6894238060
[2025-11-21 23:58:18] 2025-11-22 04:58:16,572 [wrapper] cleanup supervisor_pilot  819230 2432831
[2025-11-21 23:58:18] 2025-11-22 04:58:16,624 [wrapper] Test setup, not cleaning
[2025-11-21 23:58:18] 2025-11-22 04:58:16,731 [wrapper] apfmon messages muted
[2025-11-21 23:58:18] 2025-11-22 04:58:16,769 [wrapper] ==== wrapper stdout END ====
[2025-11-21 23:58:18] 2025-11-22 04:58:16,872 [wrapper] ==== wrapper stderr END ====
[2025-11-21 23:58:18]  *** Error codes and diagnostics ***
[2025-11-21 23:58:18]     "exeErrorCode": 0,
[2025-11-21 23:58:18]     "exeErrorDiag": "",
[2025-11-21 23:58:18]     "pilotErrorCode": 0,
[2025-11-21 23:58:18]     "pilotErrorDiag": "",
[2025-11-21 23:58:18]  *** Listing of results directory ***
[2025-11-21 23:58:18] total 1306964
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 19:06 pilot3.tar.gz
[2025-11-21 23:58:18] -rwx------. 1 boincer umatlas     36292 Nov 20 19:19 runpilot2-wrapper.sh
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 19:19 queuedata.json
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas       100 Nov 21 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 23:58:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 16:11 run_atlas
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas       105 Nov 21 16:11 job.xml
[2025-11-21 23:58:18] -rw-r--r--. 2 boincer umatlas 410675667 Nov 21 16:11 EVNT.47493127._002043.pool.root.1
[2025-11-21 23:58:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 16:11 start_atlas.sh
[2025-11-21 23:58:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 16:11 shared
[2025-11-21 23:58:18] -rw-r--r--. 2 boincer umatlas    590100 Nov 21 16:11 input.tar.gz
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas         0 Nov 21 16:11 boinc_lockfile
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas      2784 Nov 21 16:11 pandaJob.out
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas        57 Nov 21 16:11 setup.sh.local
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas    989798 Nov 21 16:13 agis_schedconf.cvmfs.json
[2025-11-21 23:58:18] drwx------. 5 boincer umatlas      4096 Nov 21 16:13 pilot3
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas       533 Nov 21 23:41 boinc_task_state.xml
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas 913554805 Nov 21 23:55 HITS.47533967._000145.pool.root.1
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas      1066 Nov 21 23:56 memory_monitor_summary.json
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas   1526164 Nov 21 23:56 agis_ddmendpoints.agis.ALL.json
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas   1711517 Nov 21 23:56 log.47533967._000145.job.log.tgz.1
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas        95 Nov 21 23:57 pilot_heartbeat.json
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas      7173 Nov 21 23:57 init_data.xml
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas      8619 Nov 21 23:57 heartbeat.json
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas      4826 Nov 21 23:58 pilotlog.txt
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 23:58 boinc_mmap_file
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas        29 Nov 21 23:58 wrapper_checkpoint.txt
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas   3374819 Nov 21 23:58 log.47533967._000145.job.log.1
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas       353 Nov 21 23:58 output.list
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas       620 Nov 21 23:58 runtime_log
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas   5109760 Nov 21 23:58 result.tar.gz
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas      9333 Nov 21 23:58 runtime_log.err
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas       664 Nov 21 23:58 m1fNDmJ3Tg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIjIKDmVGIr2n.diag
[2025-11-21 23:58:18] -rw-r--r--. 1 boincer umatlas     21883 Nov 21 23:58 stderr.txt
[2025-11-21 23:58:18] HITS file was successfully produced:
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas 913554805 Nov 21 23:55 shared/HITS.pool.root.1
[2025-11-21 23:58:18]  *** Contents of shared directory: ***
[2025-11-21 23:58:18] total 1298792
[2025-11-21 23:58:18] -rw-r--r--. 2 boincer umatlas 410675667 Nov 21 16:11 ATLAS.root_0
[2025-11-21 23:58:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 16:11 start_atlas.sh
[2025-11-21 23:58:18] -rw-r--r--. 2 boincer umatlas    590100 Nov 21 16:11 input.tar.gz
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas 913554805 Nov 21 23:55 HITS.pool.root.1
[2025-11-21 23:58:18] -rw-------. 1 boincer umatlas   5109760 Nov 21 23:58 result.tar.gz
23:58:19 (2419098): run_atlas exited; CPU time 132965.771514
23:58:19 (2419098): called boinc_finish(0)

</stderr_txt>
]]>

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