Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:12:22 (1050744): wrapper (7.7.26015): starting
13:12:22 (1050744): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 13:12:22] Arguments: --nthreads 3
[2025-11-24 13:12:22] Threads: 3
[2025-11-24 13:12:22] Checking for CVMFS
[2025-11-24 13:12:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:12:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:12:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:12:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:12:23] 2.9.2.0 4060679 8356 92696 153245 0 80 28667040 36864000 0 130560 0 3102190 99.920 458838 7159 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 13:12:23] CVMFS is ok
[2025-11-24 13:12:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 13:12:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 13:12:23] Further information can be found at the LHC@home message board.
[2025-11-24 13:12:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:12:23] Checking for apptainer binary...
[2025-11-24 13:12:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:12:23] Running /usr/bin/apptainer --version
[2025-11-24 13:12:23] apptainer version 1.4.1-1.1
[2025-11-24 13:12:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:12:23] thA305
[2025-11-24 13:12:23] apptainer works
[2025-11-24 13:12:23] Set ATHENA_PROC_NUMBER=3
[2025-11-24 13:12:23] Set ATHENA_CORE_NUMBER=3
[2025-11-24 13:12:23] Starting ATLAS job with PandaID=6894262098
[2025-11-24 13:12:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:23:18]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:23:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:23:18] 
[2025-11-24 21:23:18] 2025-11-24 20:22:48,024 | INFO     | ***************************************
[2025-11-24 21:23:18] 2025-11-24 20:22:48,527 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 21:23:18] 2025-11-24 20:22:48,540 | INFO     | sufficient remaining disk space (228177477632 B)
[2025-11-24 21:23:18] 2025-11-24 20:22:48,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:23:18] 2025-11-24 20:22:48,541 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:23:18] 2025-11-24 20:22:48,541 | INFO     | update_server=False
[2025-11-24 21:23:18] 2025-11-24 20:22:48,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:23:18] 2025-11-24 20:22:48,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:23:18] 2025-11-24 20:22:48,920 | INFO     | all payload control threads have been joined
[2025-11-24 21:23:18] 2025-11-24 20:22:49,015 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 21:23:18] 2025-11-24 20:22:49,015 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 21:23:18] 2025-11-24 20:22:49,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:23:18] 2025-11-24 20:22:49,015 | INFO     | will abort loop
[2025-11-24 21:23:18] 2025-11-24 20:22:49,372 | INFO     | all data control threads have been joined
[2025-11-24 21:23:18] 2025-11-24 20:22:49,415 | INFO     | all job control threads have been joined
[2025-11-24 21:23:18] 2025-11-24 20:22:49,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:23:18] 2025-11-24 20:22:49,544 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:49,544 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:49,920 | INFO     | [job] validate thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:49,924 | INFO     | [payload] control thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:49,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:23:18] 2025-11-24 20:22:50,021 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:50,045 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:50,072 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:50,372 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:50,377 | INFO     | [data] control thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:50,409 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:50,420 | INFO     | [job] control thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:50,998 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:51,059 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:52,000 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:53,495 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:22:58,813 | INFO     | job.realtimelogging is not enabled
[2025-11-24 21:23:18] 2025-11-24 20:22:59,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:23:18] 2025-11-24 20:23:04,366 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:23:18] 2025-11-24 20:23:06,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649098250048)>', '<ExcThread(monitor, started 139648756074240)>']
[2025-11-24 21:23:18] 2025-11-24 20:23:11,419 | INFO     | all workflow threads have been joined
[2025-11-24 21:23:18] 2025-11-24 20:23:11,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:23:18] 2025-11-24 20:23:11,419 | INFO     | traces error code: 0
[2025-11-24 21:23:18] 2025-11-24 20:23:11,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:23:18] 2025-11-24 20:23:18,234 | INFO     | PID=1054463 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 21:23:18] 2025-11-24 20:23:18,235 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:23:18] 2025-11-24 20:23:18,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:23:18] 2025-11-24 20:23:18,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:23:18] 2025-11-24 20:23:18,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:23:18] 2025-11-24 20:23:18,235 | CRITICAL | thread 'MainThread' is not alive
[2025-11-24 21:23:18] 2025-11-24 20:23:18,235 | INFO     | [monitor] control thread has ended
[2025-11-24 21:23:18] 2025-11-24 20:23:18,282 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:23:18] 2025-11-24 20:23:18,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:23:18] 2025-11-24 20:23:18,287 [wrapper] pilotpid: 1054463
[2025-11-24 21:23:18] 2025-11-24 20:23:18,290 [wrapper] Pilot exit status: 0
[2025-11-24 21:23:18] 2025-11-24 20:23:18,297 [wrapper] pandaids: 6894262098
[2025-11-24 21:23:18] 2025-11-24 20:23:18,314 [wrapper] cleanup supervisor_pilot 1114597 1054464
[2025-11-24 21:23:18] 2025-11-24 20:23:18,316 [wrapper] Test setup, not cleaning
[2025-11-24 21:23:18] 2025-11-24 20:23:18,318 [wrapper] apfmon messages muted
[2025-11-24 21:23:18] 2025-11-24 20:23:18,321 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:23:18] 2025-11-24 20:23:18,323 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:23:18]  *** Error codes and diagnostics ***
[2025-11-24 21:23:18]     "exeErrorCode": 0,
[2025-11-24 21:23:18]     "exeErrorDiag": "",
[2025-11-24 21:23:18]     "pilotErrorCode": 0,
[2025-11-24 21:23:18]     "pilotErrorDiag": "",
[2025-11-24 21:23:18]  *** Listing of results directory ***
[2025-11-24 21:23:18] total 1306728
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc    576529 Nov 21 05:12 pilot3.tar.gz
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc      5112 Nov 21 05:43 queuedata.json
[2025-11-24 21:23:18] -rwx------ 1 boinc boinc     36292 Nov 21 05:44 runpilot2-wrapper.sh
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc       100 Nov 24 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:23:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 13:12 run_atlas
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc       105 Nov 24 13:12 job.xml
[2025-11-24 21:23:18] -rw-r--r-- 2 boinc boinc 409901484 Nov 24 13:12 EVNT.47493127._002197.pool.root.1
[2025-11-24 21:23:18] -rw-r--r-- 2 boinc boinc    590106 Nov 24 13:12 input.tar.gz
[2025-11-24 21:23:18] -rw-r--r-- 2 boinc boinc     15847 Nov 24 13:12 start_atlas.sh
[2025-11-24 21:23:18] drwxrwx--x 2 boinc boinc      4096 Nov 24 13:12 shared
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc         0 Nov 24 13:12 boinc_setup_complete
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc      6439 Nov 24 13:12 init_data.xml
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc         0 Nov 24 13:12 boinc_lockfile
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc      2785 Nov 24 13:12 pandaJob.out
[2025-11-24 21:23:18] -rw------- 1 boinc boinc    989803 Nov 24 13:12 agis_schedconf.cvmfs.json
[2025-11-24 21:23:18] drwx------ 5 boinc boinc      4096 Nov 24 13:12 pilot3
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc       531 Nov 24 21:19 boinc_task_state.xml
[2025-11-24 21:23:18] -rw------- 1 boinc boinc 913642934 Nov 24 21:22 HITS.47533967._001685.pool.root.1
[2025-11-24 21:23:18] -rw------- 1 boinc boinc      1027 Nov 24 21:22 memory_monitor_summary.json
[2025-11-24 21:23:18] -rw------- 1 boinc boinc   1516227 Nov 24 21:22 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:23:18] -rw------- 1 boinc boinc   1183274 Nov 24 21:22 log.47533967._001685.job.log.tgz.1
[2025-11-24 21:23:18] -rw------- 1 boinc boinc      8568 Nov 24 21:22 heartbeat.json
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc        28 Nov 24 21:23 wrapper_checkpoint.txt
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc      8192 Nov 24 21:23 boinc_mmap_file
[2025-11-24 21:23:18] -rw------- 1 boinc boinc       817 Nov 24 21:23 pilotlog.txt
[2025-11-24 21:23:18] -rw------- 1 boinc boinc        95 Nov 24 21:23 pilot_heartbeat.json
[2025-11-24 21:23:18] -rw------- 1 boinc boinc   4139736 Nov 24 21:23 log.47533967._001685.job.log.1
[2025-11-24 21:23:18] -rw------- 1 boinc boinc       353 Nov 24 21:23 output.list
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc       620 Nov 24 21:23 runtime_log
[2025-11-24 21:23:18] -rw------- 1 boinc boinc   5345280 Nov 24 21:23 result.tar.gz
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc      8898 Nov 24 21:23 runtime_log.err
[2025-11-24 21:23:18] -rw------- 1 boinc boinc       665 Nov 24 21:23 Pp9LDmWBYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmI2IKDmTOktFn.diag
[2025-11-24 21:23:18] -rw-r--r-- 1 boinc boinc      8458 Nov 24 21:23 stderr.txt
[2025-11-24 21:23:18] HITS file was successfully produced:
[2025-11-24 21:23:18] -rw------- 1 boinc boinc 913642934 Nov 24 21:22 shared/HITS.pool.root.1
[2025-11-24 21:23:18]  *** Contents of shared directory: ***
[2025-11-24 21:23:18] total 1298352
[2025-11-24 21:23:18] -rw-r--r-- 2 boinc boinc 409901484 Nov 24 13:12 ATLAS.root_0
[2025-11-24 21:23:18] -rw-r--r-- 2 boinc boinc    590106 Nov 24 13:12 input.tar.gz
[2025-11-24 21:23:18] -rw-r--r-- 2 boinc boinc     15847 Nov 24 13:12 start_atlas.sh
[2025-11-24 21:23:18] -rw------- 1 boinc boinc 913642934 Nov 24 21:22 HITS.pool.root.1
[2025-11-24 21:23:18] -rw------- 1 boinc boinc   5345280 Nov 24 21:23 result.tar.gz
21:23:19 (1050744): run_atlas exited; CPU time 86996.637847
21:23:19 (1050744): called boinc_finish(0)

</stderr_txt>
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