Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:39:10 (739518): wrapper (7.7.26015): starting
11:39:10 (739518): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 11:39:10] Arguments: --nthreads 12
[2025-11-21 11:39:10] Threads: 12
[2025-11-21 11:39:10] Checking for CVMFS
[2025-11-21 11:39:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 11:39:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 11:39:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 11:39:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 11:39:11] 2.11.5.0 238152 21561 364860 153141 3 382 29322099 45568001 16027 130560 0 216700204 99.779 141413743 18585 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-21 11:39:11] CVMFS is ok
[2025-11-21 11:39:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 11:39:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 11:39:11] Further information can be found at the LHC@home message board.
[2025-11-21 11:39:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 11:39:11] Checking for apptainer binary...
[2025-11-21 11:39:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 11:39:11] Running /usr/bin/apptainer --version
[2025-11-21 11:39:11] apptainer version 1.4.1-1.el9
[2025-11-21 11:39:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 11:39:11] wns0054.triumf.lcg
[2025-11-21 11:39:11] apptainer works
[2025-11-21 11:39:11] Set ATHENA_PROC_NUMBER=12
[2025-11-21 11:39:11] Set ATHENA_CORE_NUMBER=12
[2025-11-21 11:39:11] Starting ATLAS job with PandaID=6893935647
[2025-11-21 11:39:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 11:42:42]  *** The last 200 lines of the pilot log: ***
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | WARNING  | found no stored workdir sizes
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | will not add max space = 0 B to job metrics
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | WARNING  | wrong length of table data, x=[1763753988.0], y=[718.0] (must be same and length>=4)
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | could have reported an average CPU frequency of 2532 MHz (4 samples)
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | ..............................
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . Timing measurements:
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . get job = 0 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . initial setup = 2 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . payload setup = 6 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | . stage-in = 0 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | . payload execution = 20 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | . stage-out = 0 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | . log creation = 0 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | ..............................
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893935647/pilotlog.txt
[2025-11-21 11:42:42] 2025-11-21 19:42:09,802 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 11:42:42] - Log from pilotlog.txt -
[2025-11-21 11:42:42] 2025-11-21 19:42:09,789 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 11:42:42] 2025-11-21 19:42:09,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 11:42:42] 2025-11-21 19:42:09,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 11:42:42] 2025-11-21 19:42:09,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | WARNING  | found no stored workdir sizes
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | will not add max space = 0 B to job metrics
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | WARNING  | wrong length of table data, x=[1763753988.0], y=[718.0] (must be same and length>=4)
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | could have reported an average CPU frequency of 2532 MHz (4 samples)
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | ..............................
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . Timing measurements:
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . get job = 0 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . initial setup = 2 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . payload setup = 6 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | . stage-in = 0 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | . payload execution = 20 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | . stage-out = 0 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | . log creation = 0 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | ..............................
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893935647/pilotlog.txt
[2025-11-21 11:42:42] 2025-11-21 19:42:09,802 | WARNING  | 
[2025-11-21 11:42:42] [begin log extracts]
[2025-11-21 11:42:42] - Log from pilotlog.txt -
[2025-11-21 11:42:42] 2025-11-21 19:42:09,789 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 11:42:42] 2025-11-21 19:42:09,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 11:42:42] 2025-11-21 19:42:09,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 11:42:42] 2025-11-21 19:42:09,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | WARNING  | found no stored workdir sizes
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | will not add max space = 0 B to job metrics
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | WARNING  | wrong length of table data, x=[1763753988.0], y=[718.0] (must be same and length>=4)
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | could have reported an average CPU frequency of 2532 MHz (4 samples)
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | ..............................
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . Timing measurements:
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . get job = 0 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . initial setup = 2 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,790 | INFO     | . payload setup = 6 s
[2025-11-21 11:42:42] 2025-11-21 19:42:09,791 | INFO     | . stage-in = 0 s
[2025-11-21 11:42:43] 2025-11-21 19:42:09,791 | INFO     | . payload execution = 20 s
[2025-11-21 11:42:43] 2025-11-21 19:42:09,791 | INFO     | . stage-out = 0 s
[2025-11-21 11:42:43] 2025-11-21 19:42:09,791 | INFO     | . log creation = 0 s
[2025-11-21 11:42:43] 2025-11-21 19:42:09,791 | INFO     | ..............................
[2025-11-21 11:42:43] 2025-11-21 19:42:09,791 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 11:42:43] 2025-11-21 19:42:09,791 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893935647/pilotlog.txt
[2025-11-21 11:42:43] [end log extracts]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,802 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-21 11:42:43] 2025-11-21 19:42:09,803 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 11:42:43] 2025-11-21 19:42:09,858 | INFO     | 
[2025-11-21 11:42:43] 2025-11-21 19:42:09,858 | INFO     | job summary report
[2025-11-21 11:42:43] 2025-11-21 19:42:09,858 | INFO     | --------------------------------------------------
[2025-11-21 11:42:43] 2025-11-21 19:42:09,858 | INFO     | PanDA job id: 6893935647
[2025-11-21 11:42:43] 2025-11-21 19:42:09,858 | INFO     | task id: 47523642
[2025-11-21 11:42:43] 2025-11-21 19:42:09,858 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 11:39:58,147 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 11:42:43] 2025-11-21 19:42:09,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 11:42:43] 2025-11-21 19:42:09,858 | INFO     | pilot state: failed 
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | transexitcode: 65
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | exeerrorcode: 65
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | exitcode: 65
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | cpuconsumptiontime: 17 s
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | nevents: 0
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | neventsw: 0
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | pid: 749740
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | pgrp: 749740
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | corecount: 12
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | event service: False
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | sizes: {0: 2298405, 4: 2298667, 11: 2298695, 30: 2321990, 31: 2326282, 32: 2326310, 154: 2326604}
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | --------------------------------------------------
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | 
[2025-11-21 11:42:43] 2025-11-21 19:42:09,859 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 11:42:43] 2025-11-21 19:42:09,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,875 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,875 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 11:42:43] 2025-11-21 19:42:09,876 | INFO     | job 6893935647 has completed (purged errors)
[2025-11-21 11:42:43] 2025-11-21 19:42:09,877 | INFO     | overall cleanup function is called
[2025-11-21 11:42:43] 2025-11-21 19:42:10,882 | INFO     | --- collectZombieJob: --- 10, [749740]
[2025-11-21 11:42:43] 2025-11-21 19:42:10,882 | INFO     | zombie collector waiting for pid 749740
[2025-11-21 11:42:43] 2025-11-21 19:42:10,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 11:42:43] 2025-11-21 19:42:10,882 | INFO     | collected zombie processes
[2025-11-21 11:42:43] 2025-11-21 19:42:10,883 | INFO     | will attempt to kill all subprocesses of pid=749740
[2025-11-21 11:42:43] 2025-11-21 19:42:11,040 | INFO     | process IDs to be killed: [749740] (in reverse order)
[2025-11-21 11:42:43] 2025-11-21 19:42:11,110 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 11:42:43] 2025-11-21 19:42:11,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 11:42:43] 2025-11-21 19:42:11,147 | INFO     | did not find any defunct processes belonging to 749740
[2025-11-21 11:42:43] 2025-11-21 19:42:11,159 | INFO     | did not find any defunct processes belonging to 749740
[2025-11-21 11:42:43] 2025-11-21 19:42:11,160 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 11:42:43] 2025-11-21 19:42:11,160 | INFO     | ready for new job
[2025-11-21 11:42:43] 2025-11-21 19:42:11,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 11:42:43] 2025-11-21 19:42:11,161 | INFO     | ***************************************
[2025-11-21 11:42:43] 2025-11-21 19:42:11,161 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 11:42:43] 2025-11-21 19:42:11,161 | INFO     | ***************************************
[2025-11-21 11:42:43] 2025-11-21 19:42:11,161 | INFO     | 
[2025-11-21 11:42:43] 2025-11-21 19:42:11,163 | INFO     | architecture information:
[2025-11-21 11:42:43] 2025-11-21 19:42:11,163 | INFO     | executing command: cat /etc/os-release
[2025-11-21 11:42:43] 2025-11-21 19:42:11,268 | INFO     | cat /etc/os-release:
[2025-11-21 11:42:43] NAME="CentOS Linux"
[2025-11-21 11:42:43] VERSION="7 (Core)"
[2025-11-21 11:42:43] ID="centos"
[2025-11-21 11:42:43] ID_LIKE="rhel fedora"
[2025-11-21 11:42:43] VERSION_ID="7"
[2025-11-21 11:42:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 11:42:43] ANSI_COLOR="0;31"
[2025-11-21 11:42:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 11:42:43] HOME_URL="https://www.centos.org/"
[2025-11-21 11:42:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 11:42:43] 
[2025-11-21 11:42:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 11:42:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 11:42:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 11:42:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 11:42:43] 
[2025-11-21 11:42:43] 2025-11-21 19:42:11,268 | INFO     | ***************************************
[2025-11-21 11:42:43] 2025-11-21 19:42:11,780 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 11:42:43] 2025-11-21 19:42:11,962 | INFO     | sufficient remaining disk space (1856316112896 B)
[2025-11-21 11:42:43] 2025-11-21 19:42:11,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 11:42:43] 2025-11-21 19:42:11,962 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 11:42:43] 2025-11-21 19:42:11,962 | INFO     | update_server=False
[2025-11-21 11:42:43] 2025-11-21 19:42:11,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 11:42:43] 2025-11-21 19:42:11,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:42:43] 2025-11-21 19:42:11,963 | INFO     | aborting loop
[2025-11-21 11:42:43] 2025-11-21 19:42:12,280 | INFO     | all data control threads have been joined
[2025-11-21 11:42:43] 2025-11-21 19:42:12,689 | INFO     | all payload control threads have been joined
[2025-11-21 11:42:43] 2025-11-21 19:42:12,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 11:42:43] 2025-11-21 19:42:12,967 | INFO     | [job] retrieve thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:12,967 | INFO     | [job] job monitor thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:13,258 | INFO     | [job] validate thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:13,285 | INFO     | [data] control thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:13,400 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:13,435 | INFO     | [payload] failed_post thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:13,493 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:13,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:13,664 | INFO     | all job control threads have been joined
[2025-11-21 11:42:43] 2025-11-21 19:42:13,694 | INFO     | [payload] control thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:14,405 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:14,443 | INFO     | [data] copytool_in thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:14,483 | INFO     | [payload] validate_post thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:14,669 | INFO     | [job] control thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:14,747 | INFO     | [data] copytool_out thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:14,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:42:43] 2025-11-21 19:42:15,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 11:42:43] 2025-11-21 19:42:15,875 | INFO     | [job] queue monitor thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:19,420 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 11:42:43] 2025-11-21 19:42:20,439 | INFO     | [monitor] cgroup control has ended
[2025-11-21 11:42:43] 2025-11-21 19:42:21,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998067488576)>', '<ExcThread(monitor, started 139997520840448)>']
[2025-11-21 11:42:43] 2025-11-21 19:42:26,653 | INFO     | all workflow threads have been joined
[2025-11-21 11:42:43] 2025-11-21 19:42:26,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 11:42:43] 2025-11-21 19:42:26,654 | INFO     | traces error code: 0
[2025-11-21 11:42:43] 2025-11-21 19:42:26,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 11:42:43] 2025-11-21 19:42:42,729 | INFO     | PID=743207 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 11:42:43] 2025-11-21 19:42:42,730 | INFO     | .. there are 17 such processes running
[2025-11-21 11:42:43] 2025-11-21 19:42:42,730 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 11:42:43] 2025-11-21 19:42:42,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 11:42:43] 2025-11-21 19:42:42,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 11:42:43] 2025-11-21 19:42:42,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 11:42:43] 2025-11-21 19:42:42,731 | INFO     | [monitor] control thread has ended
[2025-11-21 11:42:43] 2025-11-21 19:42:42,845 [wrapper] ==== pilot stdout END ====
[2025-11-21 11:42:43] 2025-11-21 19:42:42,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 11:42:43] 2025-11-21 19:42:42,849 [wrapper] pilotpid: 743207
[2025-11-21 11:42:43] 2025-11-21 19:42:42,851 [wrapper] Pilot exit status: 0
[2025-11-21 11:42:43] 2025-11-21 19:42:42,866 [wrapper] pandaids: 6893935647
[2025-11-21 11:42:43] 2025-11-21 19:42:42,905 [wrapper] cleanup supervisor_pilot  743213 743208
[2025-11-21 11:42:43] 2025-11-21 19:42:42,908 [wrapper] Test setup, not cleaning
[2025-11-21 11:42:43] 2025-11-21 19:42:42,910 [wrapper] apfmon messages muted
[2025-11-21 11:42:43] 2025-11-21 19:42:42,913 [wrapper] ==== wrapper stdout END ====
[2025-11-21 11:42:43] 2025-11-21 19:42:42,915 [wrapper] ==== wrapper stderr END ====
[2025-11-21 11:42:43]  *** Error codes and diagnostics ***
[2025-11-21 11:42:43]     "exeErrorCode": 65,
[2025-11-21 11:42:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-21 11:42:43]     "pilotErrorCode": 1305,
[2025-11-21 11:42:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-21 11:42:43]  *** Listing of results directory ***
[2025-11-21 11:42:43] total 290504
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc    576529 Nov 21 03:32 pilot3.tar.gz
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc      5112 Nov 21 03:37 queuedata.json
[2025-11-21 11:42:43] -rwx------. 1 boinc boinc     36292 Nov 21 03:38 runpilot2-wrapper.sh
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc       100 Nov 21 11:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 11:42:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 11:39 run_atlas
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc       105 Nov 21 11:39 job.xml
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc      6595 Nov 21 11:39 init_data.xml
[2025-11-21 11:42:43] -rw-r--r--. 2 boinc boinc 293349081 Nov 21 11:39 EVNT.47523640._000002.pool.root.1
[2025-11-21 11:42:43] -rw-r--r--. 2 boinc boinc     15847 Nov 21 11:39 start_atlas.sh
[2025-11-21 11:42:43] drwxrwx--x. 2 boinc boinc      4096 Nov 21 11:39 shared
[2025-11-21 11:42:43] -rw-r--r--. 2 boinc boinc    589957 Nov 21 11:39 input.tar.gz
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc         0 Nov 21 11:39 boinc_lockfile
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc      2629 Nov 21 11:39 pandaJob.out
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc    989798 Nov 21 11:39 agis_schedconf.cvmfs.json
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc   1526164 Nov 21 11:39 agis_ddmendpoints.agis.ALL.json
[2025-11-21 11:42:43] drwx------. 5 boinc boinc      4096 Nov 21 11:39 pilot3
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc       522 Nov 21 11:39 boinc_task_state.xml
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc       951 Nov 21 11:40 memory_monitor_summary.json
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc     20985 Nov 21 11:40 log.47523642._000031.job.log.tgz.1
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc      8367 Nov 21 11:42 heartbeat.json
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc      8192 Nov 21 11:42 boinc_mmap_file
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc        22 Nov 21 11:42 wrapper_checkpoint.txt
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc        95 Nov 21 11:42 pilot_heartbeat.json
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc       822 Nov 21 11:42 pilotlog.txt
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc     86797 Nov 21 11:42 log.47523642._000031.job.log.1
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc       188 Nov 21 11:42 output.list
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc       620 Nov 21 11:42 runtime_log
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc    122880 Nov 21 11:42 result.tar.gz
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc      8636 Nov 21 11:42 runtime_log.err
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc       647 Nov 21 11:42 GucMDmjeeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqMJKDmQIPRzn.diag
[2025-11-21 11:42:43] -rw-r--r--. 1 boinc boinc     21743 Nov 21 11:42 stderr.txt
[2025-11-21 11:42:43] No HITS result produced
[2025-11-21 11:42:43]  *** Contents of shared directory: ***
[2025-11-21 11:42:43] total 287196
[2025-11-21 11:42:43] -rw-r--r--. 2 boinc boinc 293349081 Nov 21 11:39 ATLAS.root_0
[2025-11-21 11:42:43] -rw-r--r--. 2 boinc boinc     15847 Nov 21 11:39 start_atlas.sh
[2025-11-21 11:42:43] -rw-r--r--. 2 boinc boinc    589957 Nov 21 11:39 input.tar.gz
[2025-11-21 11:42:43] -rw-------. 1 boinc boinc    122880 Nov 21 11:42 result.tar.gz
11:42:44 (739518): run_atlas exited; CPU time 21.756437
11:42:44 (739518): called boinc_finish(0)

</stderr_txt>
]]>

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