Stderr output

<core_client_version>7.16.16</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-21 22:39:41 (43684): vboxwrapper version 26210
2025-11-21 22:39:41 (43684): BOINC client version: 7.16.16
2025-11-21 22:39:41 (43684): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-21 22:39:41 (43684): Successfully copied 'init_data.xml' to the shared directory.
2025-11-21 22:39:41 (43684): Create VM. (boinc_19898a908a87995e, slot#0)
2025-11-21 22:39:41 (43684): Setting Memory Size for VM. (4400MB)
2025-11-21 22:39:42 (43684): Setting CPU Count for VM. (4)
2025-11-21 22:39:42 (43684): Setting Chipset Options for VM.
2025-11-21 22:39:42 (43684): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-21 22:39:42 (43684): Setting Boot Options for VM.
2025-11-21 22:39:42 (43684): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-21 22:39:42 (43684): Enabling VM Network Access.
2025-11-21 22:39:42 (43684): Disabling USB Support for VM.
2025-11-21 22:39:42 (43684): Disabling COM Port Support for VM.
2025-11-21 22:39:42 (43684): Disabling LPT Port Support for VM.
2025-11-21 22:39:42 (43684): Disabling Audio Support for VM.
2025-11-21 22:39:42 (43684): Disabling Clipboard Support for VM.
2025-11-21 22:39:42 (43684): Disabling Drag and Drop Support for VM.
2025-11-21 22:39:42 (43684): Adding storage controller(s) to VM.
2025-11-21 22:39:42 (43684): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-21 22:39:43 (43684): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-21 22:39:43 (43684): forwarding host port 33235 to guest port 80
2025-11-21 22:39:43 (43684): Enabling remote desktop for VM.
2025-11-21 22:39:43 (43684): Enabling shared directory for VM.
2025-11-21 22:39:43 (43684): Starting VM using VBoxManage interface. (boinc_19898a908a87995e, slot#0)
2025-11-21 22:39:45 (43684): Successfully started VM. (PID = '44169')
2025-11-21 22:39:45 (43684): Reporting VM Process ID to BOINC.
2025-11-21 22:39:45 (43684): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-21 22:39:45 (43684): Guest Log: CPUID EDX: 0x178bfbff
2025-11-21 22:39:45 (43684): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-21 22:39:45 (43684): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-21 22:39:45 (43684): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-21 22:39:45 (43684): Detected: Web Application Enabled (http://localhost:33235)
2025-11-21 22:39:45 (43684): Detected: Remote Desktop Enabled (localhost:60827)
2025-11-21 22:39:45 (43684): Preference change detected
2025-11-21 22:39:45 (43684): Setting CPU throttle for VM. (100%)
2025-11-21 22:39:45 (43684): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-21 22:39:46 (43684): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-21 22:39:46 (43684): Guest Log: BIOS: Booting from Hard Disk...
2025-11-21 22:39:49 (43684): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-21 22:39:49 (43684): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-21 22:39:49 (43684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-21 22:39:54 (43684): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-21 22:39:54 (43684): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-21 22:40:00 (43684): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-21 22:40:00 (43684): Guest Log: 00:00:00.000147 main     Log opened 2025-11-22T04:39:57.760037000Z
2025-11-21 22:40:00 (43684): Guest Log: 00:00:00.000221 main     OS Product: Linux
2025-11-21 22:40:00 (43684): Guest Log: 00:00:00.000242 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-21 22:40:00 (43684): Guest Log: 00:00:00.000258 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-21 22:40:00 (43684): Guest Log: 00:00:00.000274 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-21 22:40:00 (43684): Guest Log: 00:00:00.000274 main     Process ID: 1301
2025-11-21 22:40:00 (43684): Guest Log: 00:00:00.000275 main     Package type: LINUX_64BITS_GENERIC
2025-11-21 22:40:00 (43684): Guest Log: 00:00:00.001386 main     5.2.32 r132073 started. Verbose level = 0
2025-11-21 22:40:00 (43684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-21 22:40:00 (43684): Guest Log: [INFO] Mounting shared directory
2025-11-21 22:40:00 (43684): Guest Log: [INFO] Checking for init_data.xml
2025-11-21 22:40:03 (43684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-21 22:40:03 (43684): Guest Log: [INFO] Detected branch: prod
2025-11-21 22:40:04 (43684): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-21 22:40:04 (43684): Guest Log: Copying input files
2025-11-21 22:40:05 (43684): Guest Log: Copied input files into RunAtlas.
2025-11-21 22:40:06 (43684): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-21 22:40:06 (43684): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-21 22:40:06 (43684): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-21 22:40:06 (43684): Guest Log: Further information can be found at the LHC@home message board.
2025-11-21 22:40:16 (43684): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-21 22:40:16 (43684): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-21 22:40:16 (43684): Guest Log: 2.6.3.0 1581 0 32188 153159 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-21 22:40:17 (43684): Guest Log: copied the webapp to /var/www
2025-11-21 22:40:17 (43684): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-21 22:40:17 (43684): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-21 22:40:17 (43684): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-21 22:40:17 (43684): Guest Log:  *** Starting ATLAS job. (PandaID=6894262123 taskID=47533967) ***
2025-11-22 00:18:56 (43684): Status Report: Elapsed Time: '6000.000000'
2025-11-22 00:18:56 (43684): Status Report: CPU Time: '22570.670000'
2025-11-22 01:58:08 (43684): Status Report: Elapsed Time: '12000.000000'
2025-11-22 01:58:08 (43684): Status Report: CPU Time: '46333.640000'
2025-11-22 03:37:20 (43684): Status Report: Elapsed Time: '18000.000000'
2025-11-22 03:37:20 (43684): Status Report: CPU Time: '70104.630000'
2025-11-22 05:16:32 (43684): Status Report: Elapsed Time: '24000.000000'
2025-11-22 05:16:32 (43684): Status Report: CPU Time: '93874.590000'
2025-11-22 06:55:44 (43684): Status Report: Elapsed Time: '30000.000000'
2025-11-22 06:55:44 (43684): Status Report: CPU Time: '117648.370000'
2025-11-22 08:05:52 (43684): Guest Log:  *** Job finished ***
2025-11-22 08:05:52 (43684): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:28,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:28,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:43,427 | INFO     | [monitor] cgroup control has ended
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:43,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716384565056)>', '<ExcThread(monitor, started 140715636008704)>']
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:44,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:44,410 | INFO     | [monitor] control thread has ended
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,865 | INFO     | all workflow threads have been joined
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,866 | INFO     | end of generic workflow (traces error code: 0)
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,866 | INFO     | traces error code: 0
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,938 [wrapper] ==== pilot stdout END ====
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,944 [wrapper] ==== wrapper stdout RESUME ====
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,949 [wrapper] pilotpid: 5975
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,954 [wrapper] Pilot exit status: 0
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,970 [wrapper] pandaids: 6894262123
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:48,998 [wrapper] cleanup supervisor_pilot 11167 5976
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:49,003 [wrapper] Test setup, not cleaning
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:49,008 [wrapper] apfmon messages muted
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:49,012 [wrapper] ==== wrapper stdout END ====
2025-11-22 08:05:52 (43684): Guest Log: 2025-11-22 14:05:49,016 [wrapper] ==== wrapper stderr END ====
2025-11-22 08:05:52 (43684): Guest Log:  *** Error codes and diagnostics ***
2025-11-22 08:05:52 (43684): Guest Log:     "exeErrorCode": 0,
2025-11-22 08:05:52 (43684): Guest Log:     "exeErrorDiag": "",
2025-11-22 08:05:52 (43684): Guest Log:     "pilotErrorCode": 0,
2025-11-22 08:05:52 (43684): Guest Log:     "pilotErrorDiag": "",
2025-11-22 08:05:52 (43684): Guest Log:  *** Listing of results directory ***
2025-11-22 08:05:52 (43684): Guest Log: total 905112
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 04:12 pilot3.tar.gz
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 04:51 queuedata.json
2025-11-22 08:05:52 (43684): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 04:51 runpilot2-wrapper.sh
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 22 04:40 start_atlas.sh
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 atlas atlas    590104 Nov 22 04:40 input.tar.gz
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 atlas atlas      9078 Nov 22 04:40 init_data.xml
2025-11-22 08:05:52 (43684): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 22 04:40 EVNT.47493127._002199.pool.root.1 -> /data/./ATLAS.root_0
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 22 04:40 pandaJob.out
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas    989752 Nov 22 04:40 agis_schedconf.cvmfs.json
2025-11-22 08:05:52 (43684): Guest Log: drwx------. 5 atlas atlas      4096 Nov 22 04:41 pilot3
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas 911515195 Nov 22 14:04 HITS.47533967._001710.pool.root.1
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas      1039 Nov 22 14:04 memory_monitor_summary.json
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 22 14:04 agis_ddmendpoints.agis.ALL.json
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas   1356177 Nov 22 14:04 log.47533967._001710.job.log.tgz.1
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas      8656 Nov 22 14:04 heartbeat.json
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas        95 Nov 22 14:05 pilot_heartbeat.json
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas      4991 Nov 22 14:05 pilotlog.txt
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas   4375186 Nov 22 14:05 log.47533967._001710.job.log.1
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas       353 Nov 22 14:05 output.list
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 22 14:05 runtime_log
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas   5754880 Nov 22 14:05 result.tar.gz
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas       665 Nov 22 14:05 TZsMDmdIYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml2IKDmDY32hm.diag
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Nov 22 14:05 runtime_log.err
2025-11-22 08:05:52 (43684): Guest Log: Looking for outputfile HITS.47533967._001710.pool.root.1
2025-11-22 08:05:52 (43684): Guest Log: HITS file was successfully produced
2025-11-22 08:05:52 (43684): Guest Log: -rw-------. 1 atlas atlas 911515195 Nov 22 14:04 /home/atlas/RunAtlas/HITS.47533967._001710.pool.root.1
2025-11-22 08:05:52 (43684): Guest Log: Successfully finished the ATLAS job!
2025-11-22 08:05:52 (43684): Guest Log: Copying the results back to the shared directory!
2025-11-22 08:05:52 (43684): Guest Log:  *** Contents of shared directory: ***
2025-11-22 08:05:52 (43684): Guest Log: total 408664
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 root root 412087694 Nov 22 04:39 ATLAS.root_0
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 root root      9078 Nov 22 04:39 init_data.xml
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 root root    590104 Nov 22 04:39 input.tar.gz
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 root root   5754880 Nov 22 14:05 result.tar.gz
2025-11-22 08:05:52 (43684): Guest Log: -rw-r--r--. 1 root root     15847 Nov 22 04:39 start_atlas.sh
2025-11-22 08:05:52 (43684): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-22 08:05:52 (43684): VM Completion File Detected.
2025-11-22 08:05:52 (43684): Powering off VM.
2025-11-22 08:05:52 (43684): Successfully stopped VM.
2025-11-22 08:05:52 (43684): Deregistering VM. (boinc_19898a908a87995e, slot#0)
2025-11-22 08:05:52 (43684): Removing network bandwidth throttle group from VM.
2025-11-22 08:05:52 (43684): Removing VM from VirtualBox.
2025-11-22 08:05:57 (43684): called boinc_finish(0)

</stderr_txt>
]]>

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