Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:42:20 (29404): wrapper (7.7.26015): starting
14:42:20 (29404): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 14:42:20] Arguments: --nthreads 8
[2025-11-21 14:42:20] Threads: 8
[2025-11-21 14:42:20] Checking for CVMFS
[2025-11-21 14:42:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 14:42:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 14:42:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 14:42:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 14:42:21] 2.11.2.0 2756 66535 93180 153141 0 82 18905872 20275201 1 130560 0 20017320 99.899 3299150 30159 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 14:42:21] CVMFS is ok
[2025-11-21 14:42:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 14:42:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 14:42:21] Further information can be found at the LHC@home message board.
[2025-11-21 14:42:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 14:42:21] Checking for apptainer binary...
[2025-11-21 14:42:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 14:42:21] Running /usr/bin/apptainer --version
[2025-11-21 14:42:21] apptainer version 1.3.2-1.el7
[2025-11-21 14:42:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 14:42:22] c-115-14.aglt2.org
[2025-11-21 14:42:22] apptainer works
[2025-11-21 14:42:22] Set ATHENA_PROC_NUMBER=8
[2025-11-21 14:42:22] Set ATHENA_CORE_NUMBER=8
[2025-11-21 14:42:22] Starting ATLAS job with PandaID=6894265165
[2025-11-21 14:42:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 02:08:53]  *** The last 200 lines of the pilot log: ***
[2025-11-22 02:08:53] 2025-11-22 07:08:13,811 | INFO     | monitor loop #3037: job 0:6894265165 is in state 'finished'
[2025-11-22 02:08:53] 2025-11-22 07:08:13,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,565 | INFO     | time since job start (41136s) is within the limit (172800.0s)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,724 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 02:08:53] 2025-11-22 07:08:15,728 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-22 02:08:53] 2025-11-22 07:08:15,730 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894265165/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,731 | INFO     | extracted standard info from prmon json
[2025-11-22 02:08:53] 2025-11-22 07:08:15,731 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 02:08:53] 2025-11-22 07:08:15,731 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 02:08:53] 2025-11-22 07:08:15,742 | INFO     | fitting pss+swap vs Time
[2025-11-22 02:08:53] 2025-11-22 07:08:15,743 | INFO     | sum of square deviations: 94941354543.6205
[2025-11-22 02:08:53] 2025-11-22 07:08:15,751 | INFO     | sum of deviations: 695239323118.9948
[2025-11-22 02:08:53] 2025-11-22 07:08:15,751 | INFO     | mean x: 1763774717.0237389
[2025-11-22 02:08:53] 2025-11-22 07:08:15,751 | INFO     | mean y: 2969807.3753709197
[2025-11-22 02:08:53] 2025-11-22 07:08:15,752 | INFO     | intersect: -12912851188.569935
[2025-11-22 02:08:53] 2025-11-22 07:08:15,752 | INFO     | chi2: 6.117458815864113
[2025-11-22 02:08:53] 2025-11-22 07:08:15,753 | INFO     | sum of square deviations: 92844148464.73853
[2025-11-22 02:08:53] 2025-11-22 07:08:15,761 | INFO     | sum of deviations: 913260855140.6865
[2025-11-22 02:08:53] 2025-11-22 07:08:15,762 | INFO     | mean x: 1763774564.5276532
[2025-11-22 02:08:53] 2025-11-22 07:08:15,762 | INFO     | mean y: 2985655.2331838566
[2025-11-22 02:08:53] 2025-11-22 07:08:15,762 | INFO     | intersect: -17346371237.061222
[2025-11-22 02:08:53] 2025-11-22 07:08:15,762 | INFO     | chi2: 3.2528083790508395
[2025-11-22 02:08:53] 2025-11-22 07:08:15,763 | INFO     | current chi2=3.2528083790508395 (change=46.82745765912657 %)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,763 | INFO     | sum of square deviations: 90778059248.33582
[2025-11-22 02:08:53] 2025-11-22 07:08:15,772 | INFO     | sum of deviations: 1013464422467.9492
[2025-11-22 02:08:53] 2025-11-22 07:08:15,772 | INFO     | mean x: 1763774412.0316265
[2025-11-22 02:08:53] 2025-11-22 07:08:15,772 | INFO     | mean y: 2993041.573795181
[2025-11-22 02:08:53] 2025-11-22 07:08:15,772 | INFO     | intersect: -19688137509.73449
[2025-11-22 02:08:53] 2025-11-22 07:08:15,773 | INFO     | chi2: 2.4904002693412983
[2025-11-22 02:08:53] 2025-11-22 07:08:15,773 | INFO     | current chi2=2.4904002693412983 (change=23.438457507048412 %)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,773 | INFO     | right removable region: 663
[2025-11-22 02:08:53] 2025-11-22 07:08:15,774 | INFO     | sum of square deviations: 92843933134.73857
[2025-11-22 02:08:53] 2025-11-22 07:08:15,782 | INFO     | sum of deviations: 504117562727.2303
[2025-11-22 02:08:53] 2025-11-22 07:08:15,782 | INFO     | mean x: 1763774869.5276532
[2025-11-22 02:08:53] 2025-11-22 07:08:15,782 | INFO     | mean y: 2983677.0956651717
[2025-11-22 02:08:53] 2025-11-22 07:08:15,783 | INFO     | intersect: -9573839044.701912
[2025-11-22 02:08:53] 2025-11-22 07:08:15,783 | INFO     | chi2: 3.81490185301678
[2025-11-22 02:08:53] 2025-11-22 07:08:15,783 | INFO     | current chi2=3.81490185301678 (change=37.639108527812596 %)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,784 | INFO     | sum of square deviations: 90777709840.45624
[2025-11-22 02:08:53] 2025-11-22 07:08:15,792 | INFO     | sum of deviations: 463748122260.6612
[2025-11-22 02:08:53] 2025-11-22 07:08:15,793 | INFO     | mean x: 1763775022.0286145
[2025-11-22 02:08:53] 2025-11-22 07:08:15,793 | INFO     | mean y: 2986654.859939759
[2025-11-22 02:08:53] 2025-11-22 07:08:15,793 | INFO     | intersect: -9007456062.780617
[2025-11-22 02:08:53] 2025-11-22 07:08:15,793 | INFO     | chi2: 3.772938123556601
[2025-11-22 02:08:53] 2025-11-22 07:08:15,794 | INFO     | current chi2=3.772938123556601 (change=1.0999949953363783 %)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,794 | INFO     | left removable region: 20
[2025-11-22 02:08:53] 2025-11-22 07:08:15,794 | INFO     | sum of square deviations: 82434371577.6583
[2025-11-22 02:08:53] 2025-11-22 07:08:15,802 | INFO     | sum of deviations: 735458563639.3992
[2025-11-22 02:08:53] 2025-11-22 07:08:15,802 | INFO     | mean x: 1763774991.541213
[2025-11-22 02:08:53] 2025-11-22 07:08:15,802 | INFO     | mean y: 3014231.513219285
[2025-11-22 02:08:53] 2025-11-22 07:08:15,802 | INFO     | intersect: -15732939073.352657
[2025-11-22 02:08:53] 2025-11-22 07:08:15,803 | INFO     | chi2: 0.10800799431030474
[2025-11-22 02:08:53] 2025-11-22 07:08:15,803 | INFO     | current memory leak: 8.92 B/s (using 643 data points, chi2=0.11)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,804 | INFO     | could have reported an average CPU frequency of 2355 MHz (26 samples)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,804 | INFO     | ..............................
[2025-11-22 02:08:53] 2025-11-22 07:08:15,804 | INFO     | . Timing measurements:
[2025-11-22 02:08:53] 2025-11-22 07:08:15,804 | INFO     | . get job = 0 s
[2025-11-22 02:08:53] 2025-11-22 07:08:15,804 | INFO     | . initial setup = 2 s
[2025-11-22 02:08:53] 2025-11-22 07:08:15,804 | INFO     | . payload setup = 8 s
[2025-11-22 02:08:53] 2025-11-22 07:08:15,804 | INFO     | . stage-in = 0 s
[2025-11-22 02:08:53] 2025-11-22 07:08:15,805 | INFO     | . payload execution = 41095 s
[2025-11-22 02:08:53] 2025-11-22 07:08:15,805 | INFO     | . stage-out = 3 s
[2025-11-22 02:08:53] 2025-11-22 07:08:15,805 | INFO     | . log creation = 0 s
[2025-11-22 02:08:53] 2025-11-22 07:08:15,805 | INFO     | ..............................
[2025-11-22 02:08:53] 2025-11-22 07:08:15,889 | INFO     | 
[2025-11-22 02:08:53] 2025-11-22 07:08:15,890 | INFO     | job summary report
[2025-11-22 02:08:53] 2025-11-22 07:08:15,890 | INFO     | --------------------------------------------------
[2025-11-22 02:08:53] 2025-11-22 07:08:15,890 | INFO     | PanDA job id: 6894265165
[2025-11-22 02:08:53] 2025-11-22 07:08:15,890 | INFO     | task id: 47533967
[2025-11-22 02:08:53] 2025-11-22 07:08:15,891 | INFO     | errors: (none)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 02:08:53] 2025-11-22 07:08:15,891 | INFO     | pilot state: finished 
[2025-11-22 02:08:53] 2025-11-22 07:08:15,891 | INFO     | transexitcode: 0
[2025-11-22 02:08:53] 2025-11-22 07:08:15,891 | INFO     | exeerrorcode: 0
[2025-11-22 02:08:53] 2025-11-22 07:08:15,891 | INFO     | exeerrordiag: 
[2025-11-22 02:08:53] 2025-11-22 07:08:15,892 | INFO     | exitcode: 0
[2025-11-22 02:08:53] 2025-11-22 07:08:15,892 | INFO     | exitmsg: OK
[2025-11-22 02:08:53] 2025-11-22 07:08:15,892 | INFO     | cpuconsumptiontime: 318014 s
[2025-11-22 02:08:53] 2025-11-22 07:08:15,892 | INFO     | nevents: 1000
[2025-11-22 02:08:53] 2025-11-22 07:08:15,892 | INFO     | neventsw: 0
[2025-11-22 02:08:53] 2025-11-22 07:08:15,892 | INFO     | pid: 7283
[2025-11-22 02:08:53] 2025-11-22 07:08:15,893 | INFO     | pgrp: 7283
[2025-11-22 02:08:53] 2025-11-22 07:08:15,893 | INFO     | corecount: 8
[2025-11-22 02:08:53] 2025-11-22 07:08:15,893 | INFO     | event service: False
[2025-11-22 02:08:53] 2025-11-22 07:08:15,893 | INFO     | sizes: {0: 2298807, 6: 2299069, 11: 2299097, 41107: 2343111, 41108: 2343110, 41111: 2352188, 41114: 2352372, 41120: 2352618}
[2025-11-22 02:08:53] 2025-11-22 07:08:15,893 | INFO     | --------------------------------------------------
[2025-11-22 02:08:53] 2025-11-22 07:08:15,893 | INFO     | 
[2025-11-22 02:08:53] 2025-11-22 07:08:15,894 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 02:08:53] 2025-11-22 07:08:15,920 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 02:08:53] 2025-11-22 07:08:15,924 | INFO     | job 6894265165 has completed (purged errors)
[2025-11-22 02:08:53] 2025-11-22 07:08:15,924 | INFO     | overall cleanup function is called
[2025-11-22 02:08:53] 2025-11-22 07:08:16,939 | INFO     | --- collectZombieJob: --- 10, [7283]
[2025-11-22 02:08:53] 2025-11-22 07:08:16,940 | INFO     | zombie collector waiting for pid 7283
[2025-11-22 02:08:53] 2025-11-22 07:08:16,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 02:08:53] 2025-11-22 07:08:16,943 | INFO     | collected zombie processes
[2025-11-22 02:08:53] 2025-11-22 07:08:16,943 | INFO     | will attempt to kill all subprocesses of pid=7283
[2025-11-22 02:08:53] 2025-11-22 07:08:17,030 | INFO     | process IDs to be killed: [7283] (in reverse order)
[2025-11-22 02:08:53] 2025-11-22 07:08:17,088 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 02:08:53] 2025-11-22 07:08:17,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 02:08:53] 2025-11-22 07:08:17,092 | INFO     | did not find any defunct processes belonging to 7283
[2025-11-22 02:08:53] 2025-11-22 07:08:17,094 | INFO     | did not find any defunct processes belonging to 7283
[2025-11-22 02:08:53] 2025-11-22 07:08:17,096 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 02:08:53] 2025-11-22 07:08:17,097 | INFO     | ready for new job
[2025-11-22 02:08:53] 2025-11-22 07:08:17,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 02:08:53] 2025-11-22 07:08:17,100 | INFO     | ***************************************
[2025-11-22 02:08:53] 2025-11-22 07:08:17,100 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 02:08:53] 2025-11-22 07:08:17,100 | INFO     | ***************************************
[2025-11-22 02:08:53] 2025-11-22 07:08:17,100 | INFO     | 
[2025-11-22 02:08:53] 2025-11-22 07:08:17,101 | INFO     | architecture information:
[2025-11-22 02:08:53] 2025-11-22 07:08:17,101 | INFO     | executing command: cat /etc/os-release
[2025-11-22 02:08:53] 2025-11-22 07:08:17,118 | INFO     | cat /etc/os-release:
[2025-11-22 02:08:53] NAME="CentOS Linux"
[2025-11-22 02:08:53] VERSION="7 (Core)"
[2025-11-22 02:08:53] ID="centos"
[2025-11-22 02:08:53] ID_LIKE="rhel fedora"
[2025-11-22 02:08:53] VERSION_ID="7"
[2025-11-22 02:08:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 02:08:53] ANSI_COLOR="0;31"
[2025-11-22 02:08:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 02:08:53] HOME_URL="https://www.centos.org/"
[2025-11-22 02:08:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 02:08:53] 
[2025-11-22 02:08:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 02:08:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 02:08:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 02:08:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 02:08:53] 
[2025-11-22 02:08:53] 2025-11-22 07:08:17,118 | INFO     | ***************************************
[2025-11-22 02:08:53] 2025-11-22 07:08:17,621 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 02:08:53] 2025-11-22 07:08:17,641 | INFO     | sufficient remaining disk space (17454596096 B)
[2025-11-22 02:08:53] 2025-11-22 07:08:17,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 02:08:53] 2025-11-22 07:08:17,642 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 02:08:53] 2025-11-22 07:08:17,642 | INFO     | update_server=False
[2025-11-22 02:08:53] 2025-11-22 07:08:17,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 02:08:53] 2025-11-22 07:08:17,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 02:08:53] 2025-11-22 07:08:17,643 | INFO     | aborting loop
[2025-11-22 02:08:53] 2025-11-22 07:08:17,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 02:08:53] 2025-11-22 07:08:17,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 02:08:53] 2025-11-22 07:08:17,735 | INFO     | all data control threads have been joined
[2025-11-22 02:08:53] 2025-11-22 07:08:17,938 | INFO     | all job control threads have been joined
[2025-11-22 02:08:53] 2025-11-22 07:08:18,389 | INFO     | all payload control threads have been joined
[2025-11-22 02:08:53] 2025-11-22 07:08:18,648 | INFO     | [job] retrieve thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:18,649 | INFO     | [job] job monitor thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:18,650 | INFO     | [job] queue monitor thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:18,741 | INFO     | [data] control thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:18,756 | INFO     | [payload] failed_post thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:18,845 | INFO     | [payload] validate_post thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:18,943 | INFO     | [job] control thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:19,056 | INFO     | [data] copytool_in thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:19,061 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:19,359 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:19,395 | INFO     | [payload] control thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:19,650 | INFO     | [data] copytool_out thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:19,711 | INFO     | [job] validate thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:19,722 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:20,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 02:08:53] 2025-11-22 07:08:24,626 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:28,623 | INFO     | job.realtimelogging is not enabled
[2025-11-22 02:08:53] 2025-11-22 07:08:29,628 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 02:08:53] 2025-11-22 07:08:47,011 | INFO     | [monitor] cgroup control has ended
[2025-11-22 02:08:53] 2025-11-22 07:08:48,017 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140179843434304)>', '<ExcThread(monitor, started 140178664449792)>']
[2025-11-22 02:08:53] 2025-11-22 07:08:48,776 | INFO     | PID=632 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-22 02:08:53] 2025-11-22 07:08:48,776 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 02:08:53] 2025-11-22 07:08:48,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 02:08:53] 2025-11-22 07:08:48,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 02:08:53] 2025-11-22 07:08:48,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 02:08:53] 2025-11-22 07:08:48,777 | INFO     | [monitor] control thread has ended
[2025-11-22 02:08:53] 2025-11-22 07:08:53,043 | INFO     | all workflow threads have been joined
[2025-11-22 02:08:53] 2025-11-22 07:08:53,043 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 02:08:53] 2025-11-22 07:08:53,044 | INFO     | traces error code: 0
[2025-11-22 02:08:53] 2025-11-22 07:08:53,044 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 02:08:53] 2025-11-22 07:08:53,151 [wrapper] ==== pilot stdout END ====
[2025-11-22 02:08:53] 2025-11-22 07:08:53,156 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 02:08:53] 2025-11-22 07:08:53,160 [wrapper] pilotpid: 632
[2025-11-22 02:08:53] 2025-11-22 07:08:53,164 [wrapper] Pilot exit status: 0
[2025-11-22 02:08:53] 2025-11-22 07:08:53,182 [wrapper] pandaids: 6894265165
[2025-11-22 02:08:53] 2025-11-22 07:08:53,220 [wrapper] cleanup supervisor_pilot 32683 633
[2025-11-22 02:08:53] 2025-11-22 07:08:53,225 [wrapper] Test setup, not cleaning
[2025-11-22 02:08:53] 2025-11-22 07:08:53,229 [wrapper] apfmon messages muted
[2025-11-22 02:08:53] 2025-11-22 07:08:53,233 [wrapper] ==== wrapper stdout END ====
[2025-11-22 02:08:53] 2025-11-22 07:08:53,238 [wrapper] ==== wrapper stderr END ====
[2025-11-22 02:08:53]  *** Error codes and diagnostics ***
[2025-11-22 02:08:53]     "exeErrorCode": 0,
[2025-11-22 02:08:53]     "exeErrorDiag": "",
[2025-11-22 02:08:53]     "pilotErrorCode": 0,
[2025-11-22 02:08:53]     "pilotErrorDiag": "",
[2025-11-22 02:08:53]  *** Listing of results directory ***
[2025-11-22 02:08:53] total 1324060
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 23:56 pilot3.tar.gz
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 23:59 queuedata.json
[2025-11-22 02:08:53] -rwx------ 1 boincer umatlas     36292 Nov 20 23:59 runpilot2-wrapper.sh
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas       100 Nov 21 14:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 02:08:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 14:42 run_atlas
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas       105 Nov 21 14:42 job.xml
[2025-11-22 02:08:53] -rw-r--r-- 2 boincer umatlas 412534373 Nov 21 14:42 EVNT.47493127._002209.pool.root.1
[2025-11-22 02:08:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 14:42 start_atlas.sh
[2025-11-22 02:08:53] drwxrwx--x 2 boincer umatlas      4096 Nov 21 14:42 shared
[2025-11-22 02:08:53] -rw-r--r-- 2 boincer umatlas    590103 Nov 21 14:42 input.tar.gz
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas         0 Nov 21 14:42 boinc_lockfile
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas      2786 Nov 21 14:42 pandaJob.out
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas        57 Nov 21 14:42 setup.sh.local
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas    989798 Nov 21 14:42 agis_schedconf.cvmfs.json
[2025-11-22 02:08:53] drwx------ 5 boincer umatlas      4096 Nov 21 14:42 pilot3
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas       532 Nov 22 01:56 boinc_task_state.xml
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 02:00 init_data.xml
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas 924178917 Nov 22 02:07 HITS.47533967._001805.pool.root.1
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas      1064 Nov 22 02:08 memory_monitor_summary.json
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas        95 Nov 22 02:08 pilot_heartbeat.json
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas   1526164 Nov 22 02:08 agis_ddmendpoints.agis.ALL.json
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas   1925788 Nov 22 02:08 log.47533967._001805.job.log.tgz.1
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas      8661 Nov 22 02:08 heartbeat.json
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 02:08 boinc_mmap_file
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas        29 Nov 22 02:08 wrapper_checkpoint.txt
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas      4816 Nov 22 02:08 pilotlog.txt
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas   5672054 Nov 22 02:08 log.47533967._001805.job.log.1
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas       353 Nov 22 02:08 output.list
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas       620 Nov 22 02:08 runtime_log
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas   7618560 Nov 22 02:08 result.tar.gz
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 02:08 runtime_log.err
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas       668 Nov 22 02:08 Jy7KDmbQYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmD4IKDmcbktSn.diag
[2025-11-22 02:08:53] -rw-r--r-- 1 boincer umatlas     21274 Nov 22 02:08 stderr.txt
[2025-11-22 02:08:53] HITS file was successfully produced:
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas 924178917 Nov 22 02:07 shared/HITS.pool.root.1
[2025-11-22 02:08:53]  *** Contents of shared directory: ***
[2025-11-22 02:08:53] total 1313432
[2025-11-22 02:08:53] -rw-r--r-- 2 boincer umatlas 412534373 Nov 21 14:42 ATLAS.root_0
[2025-11-22 02:08:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 14:42 start_atlas.sh
[2025-11-22 02:08:53] -rw-r--r-- 2 boincer umatlas    590103 Nov 21 14:42 input.tar.gz
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas 924178917 Nov 22 02:07 HITS.pool.root.1
[2025-11-22 02:08:53] -rw------- 1 boincer umatlas   7618560 Nov 22 02:08 result.tar.gz
02:08:54 (29404): run_atlas exited; CPU time 314763.418378
02:08:54 (29404): called boinc_finish(0)

</stderr_txt>
]]>

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