Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:55:26 (207833): wrapper (7.7.26015): starting
10:55:26 (207833): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 10:55:26] Arguments: --nthreads 12
[2025-11-21 10:55:26] Threads: 12
[2025-11-21 10:55:26] Checking for CVMFS
[2025-11-21 10:55:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 10:55:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 10:55:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 10:55:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 10:55:26] 2.11.3.0 1603625 21531 349124 153139 1 472 31953903 45568001 12374 130560 0 235881343 99.822 122076425 21615 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-21 10:55:26] CVMFS is ok
[2025-11-21 10:55:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 10:55:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 10:55:26] Further information can be found at the LHC@home message board.
[2025-11-21 10:55:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 10:55:26] Checking for apptainer binary...
[2025-11-21 10:55:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 10:55:26] Running /usr/bin/apptainer --version
[2025-11-21 10:55:26] apptainer version 1.4.1-1.el9
[2025-11-21 10:55:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 10:55:26] wns0171.triumf.lcg
[2025-11-21 10:55:26] apptainer works
[2025-11-21 10:55:26] Set ATHENA_PROC_NUMBER=12
[2025-11-21 10:55:26] Set ATHENA_CORE_NUMBER=12
[2025-11-21 10:55:26] Starting ATLAS job with PandaID=6893935630
[2025-11-21 10:55:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 10:58:39]  *** The last 200 lines of the pilot log: ***
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | WARNING  | found no stored workdir sizes
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | INFO     | will not add max space = 0 B to job metrics
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | WARNING  | wrong length of table data, x=[1763751353.0], y=[913.0] (must be same and length>=4)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | could have reported an average CPU frequency of 3020 MHz (4 samples)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | ..............................
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . Timing measurements:
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . get job = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . initial setup = 2 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . payload setup = 3 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . stage-in = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . payload execution = 12 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . stage-out = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . log creation = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | ..............................
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893935630/pilotlog.txt
[2025-11-21 10:58:39] 2025-11-21 18:58:06,333 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 10:58:39] - Log from pilotlog.txt -
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | WARNING  | found no stored workdir sizes
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | INFO     | will not add max space = 0 B to job metrics
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | WARNING  | wrong length of table data, x=[1763751353.0], y=[913.0] (must be same and length>=4)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | could have reported an average CPU frequency of 3020 MHz (4 samples)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | ..............................
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . Timing measurements:
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . get job = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . initial setup = 2 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . payload setup = 3 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . stage-in = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . payload execution = 12 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . stage-out = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . log creation = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | ..............................
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893935630/pilotlog.txt
[2025-11-21 10:58:39] 2025-11-21 18:58:06,333 | WARNING  | 
[2025-11-21 10:58:39] [begin log extracts]
[2025-11-21 10:58:39] - Log from pilotlog.txt -
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | WARNING  | found no stored workdir sizes
[2025-11-21 10:58:39] 2025-11-21 18:58:06,324 | INFO     | will not add max space = 0 B to job metrics
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | WARNING  | wrong length of table data, x=[1763751353.0], y=[913.0] (must be same and length>=4)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | could have reported an average CPU frequency of 3020 MHz (4 samples)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | ..............................
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . Timing measurements:
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . get job = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . initial setup = 2 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . payload setup = 3 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . stage-in = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . payload execution = 12 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . stage-out = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | . log creation = 0 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | ..............................
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 10:58:39] 2025-11-21 18:58:06,325 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893935630/pilotlog.txt
[2025-11-21 10:58:39] [end log extracts]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,333 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,334 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 10:58:39] 2025-11-21 18:58:06,873 | INFO     | 
[2025-11-21 10:58:39] 2025-11-21 18:58:06,873 | INFO     | job summary report
[2025-11-21 10:58:39] 2025-11-21 18:58:06,873 | INFO     | --------------------------------------------------
[2025-11-21 10:58:39] 2025-11-21 18:58:06,873 | INFO     | PanDA job id: 6893935630
[2025-11-21 10:58:39] 2025-11-21 18:58:06,873 | INFO     | task id: 47523642
[2025-11-21 10:58:39] 2025-11-21 18:58:06,873 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 10:55:59,090 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 10:58:39] 2025-11-21 18:58:06,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 10:58:39] 2025-11-21 18:58:06,873 | INFO     | pilot state: failed 
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | transexitcode: 65
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | exeerrorcode: 65
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | exitcode: 65
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | cpuconsumptiontime: 12 s
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | nevents: 0
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | neventsw: 0
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | pid: 218053
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | pgrp: 218053
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | corecount: 12
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | event service: False
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | sizes: {0: 2298227, 1: 2298482, 3: 2298744, 11: 2298772, 19: 2321938, 20: 2326386, 139: 2326524}
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | --------------------------------------------------
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | 
[2025-11-21 10:58:39] 2025-11-21 18:58:06,874 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 10:58:39] 2025-11-21 18:58:06,888 | INFO     | job 6893935630 has completed (purged errors)
[2025-11-21 10:58:39] 2025-11-21 18:58:06,888 | INFO     | overall cleanup function is called
[2025-11-21 10:58:39] 2025-11-21 18:58:07,893 | INFO     | --- collectZombieJob: --- 10, [218053]
[2025-11-21 10:58:39] 2025-11-21 18:58:07,894 | INFO     | zombie collector waiting for pid 218053
[2025-11-21 10:58:39] 2025-11-21 18:58:07,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 10:58:39] 2025-11-21 18:58:07,894 | INFO     | collected zombie processes
[2025-11-21 10:58:39] 2025-11-21 18:58:07,894 | INFO     | will attempt to kill all subprocesses of pid=218053
[2025-11-21 10:58:39] 2025-11-21 18:58:07,999 | INFO     | process IDs to be killed: [218053] (in reverse order)
[2025-11-21 10:58:39] 2025-11-21 18:58:08,036 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 10:58:39] 2025-11-21 18:58:08,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 10:58:39] 2025-11-21 18:58:08,040 | INFO     | did not find any defunct processes belonging to 218053
[2025-11-21 10:58:39] 2025-11-21 18:58:08,043 | INFO     | did not find any defunct processes belonging to 218053
[2025-11-21 10:58:39] 2025-11-21 18:58:08,044 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 10:58:39] 2025-11-21 18:58:08,044 | INFO     | ready for new job
[2025-11-21 10:58:39] 2025-11-21 18:58:08,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 10:58:39] 2025-11-21 18:58:08,045 | INFO     | ***************************************
[2025-11-21 10:58:39] 2025-11-21 18:58:08,045 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 10:58:39] 2025-11-21 18:58:08,045 | INFO     | ***************************************
[2025-11-21 10:58:39] 2025-11-21 18:58:08,045 | INFO     | 
[2025-11-21 10:58:39] 2025-11-21 18:58:08,047 | INFO     | architecture information:
[2025-11-21 10:58:39] 2025-11-21 18:58:08,047 | INFO     | executing command: cat /etc/os-release
[2025-11-21 10:58:39] 2025-11-21 18:58:08,054 | INFO     | cat /etc/os-release:
[2025-11-21 10:58:39] NAME="CentOS Linux"
[2025-11-21 10:58:39] VERSION="7 (Core)"
[2025-11-21 10:58:39] ID="centos"
[2025-11-21 10:58:39] ID_LIKE="rhel fedora"
[2025-11-21 10:58:39] VERSION_ID="7"
[2025-11-21 10:58:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 10:58:39] ANSI_COLOR="0;31"
[2025-11-21 10:58:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 10:58:39] HOME_URL="https://www.centos.org/"
[2025-11-21 10:58:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 10:58:39] 
[2025-11-21 10:58:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 10:58:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 10:58:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 10:58:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 10:58:39] 
[2025-11-21 10:58:39] 2025-11-21 18:58:08,054 | INFO     | ***************************************
[2025-11-21 10:58:39] 2025-11-21 18:58:08,557 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 10:58:39] 2025-11-21 18:58:08,566 | INFO     | sufficient remaining disk space (2485007679488 B)
[2025-11-21 10:58:39] 2025-11-21 18:58:08,566 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 10:58:39] 2025-11-21 18:58:08,566 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 10:58:39] 2025-11-21 18:58:08,566 | INFO     | update_server=False
[2025-11-21 10:58:39] 2025-11-21 18:58:08,566 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 10:58:39] 2025-11-21 18:58:08,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:58:39] 2025-11-21 18:58:08,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 10:58:39] 2025-11-21 18:58:08,567 | INFO     | aborting loop
[2025-11-21 10:58:39] 2025-11-21 18:58:08,691 | INFO     | all data control threads have been joined
[2025-11-21 10:58:39] 2025-11-21 18:58:09,571 | INFO     | [job] job monitor thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:09,572 | INFO     | [job] retrieve thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:09,573 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:09,573 | INFO     | all payload control threads have been joined
[2025-11-21 10:58:39] 2025-11-21 18:58:09,635 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:09,696 | INFO     | [data] control thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:10,047 | INFO     | all job control threads have been joined
[2025-11-21 10:58:39] 2025-11-21 18:58:10,210 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:10,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 10:58:39] 2025-11-21 18:58:10,493 | INFO     | [payload] failed_post thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:10,572 | INFO     | [data] copytool_out thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:10,578 | INFO     | [payload] control thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:10,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:10,733 | INFO     | [data] copytool_in thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:10,934 | INFO     | [job] validate thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:11,052 | INFO     | [job] control thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:11,117 | INFO     | [payload] validate_post thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:11,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:58:39] 2025-11-21 18:58:12,394 | INFO     | [job] queue monitor thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:14,392 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 10:58:39] 2025-11-21 18:58:33,308 | INFO     | [monitor] cgroup control has ended
[2025-11-21 10:58:39] 2025-11-21 18:58:34,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107221542720)>', '<ExcThread(monitor, started 140106824394496)>']
[2025-11-21 10:58:39] 2025-11-21 18:58:38,360 | INFO     | PID=211508 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 10:58:39] 2025-11-21 18:58:38,360 | INFO     | .. there are 14 such processes running
[2025-11-21 10:58:39] 2025-11-21 18:58:38,360 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 10:58:39] 2025-11-21 18:58:38,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 10:58:39] 2025-11-21 18:58:38,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 10:58:39] 2025-11-21 18:58:38,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 10:58:39] 2025-11-21 18:58:38,360 | INFO     | [monitor] control thread has ended
[2025-11-21 10:58:39] 2025-11-21 18:58:39,323 | INFO     | all workflow threads have been joined
[2025-11-21 10:58:39] 2025-11-21 18:58:39,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 10:58:39] 2025-11-21 18:58:39,323 | INFO     | traces error code: 0
[2025-11-21 10:58:39] 2025-11-21 18:58:39,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 10:58:39] 2025-11-21 18:58:39,419 [wrapper] ==== pilot stdout END ====
[2025-11-21 10:58:39] 2025-11-21 18:58:39,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 10:58:39] 2025-11-21 18:58:39,422 [wrapper] pilotpid: 211508
[2025-11-21 10:58:39] 2025-11-21 18:58:39,424 [wrapper] Pilot exit status: 0
[2025-11-21 10:58:39] 2025-11-21 18:58:39,430 [wrapper] pandaids: 6893935630
[2025-11-21 10:58:39] 2025-11-21 18:58:39,455 [wrapper] cleanup supervisor_pilot  211514 211509
[2025-11-21 10:58:39] 2025-11-21 18:58:39,456 [wrapper] Test setup, not cleaning
[2025-11-21 10:58:39] 2025-11-21 18:58:39,458 [wrapper] apfmon messages muted
[2025-11-21 10:58:39] 2025-11-21 18:58:39,459 [wrapper] ==== wrapper stdout END ====
[2025-11-21 10:58:39] 2025-11-21 18:58:39,461 [wrapper] ==== wrapper stderr END ====
[2025-11-21 10:58:39]  *** Error codes and diagnostics ***
[2025-11-21 10:58:39]     "exeErrorCode": 65,
[2025-11-21 10:58:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-21 10:58:39]     "pilotErrorCode": 1305,
[2025-11-21 10:58:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-21 10:58:39]  *** Listing of results directory ***
[2025-11-21 10:58:39] total 294068
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc    576529 Nov 21 03:23 pilot3.tar.gz
[2025-11-21 10:58:39] -rwx------. 1 boinc boinc     36292 Nov 21 03:24 runpilot2-wrapper.sh
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc      5112 Nov 21 03:24 queuedata.json
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc       100 Nov 21 10:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 10:58:39] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 10:55 run_atlas
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc       105 Nov 21 10:55 job.xml
[2025-11-21 10:58:39] -rw-r--r--. 2 boinc boinc    589953 Nov 21 10:55 input.tar.gz
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc      6628 Nov 21 10:55 init_data.xml
[2025-11-21 10:58:39] -rw-r--r--. 2 boinc boinc 297000870 Nov 21 10:55 EVNT.47523640._000001.pool.root.1
[2025-11-21 10:58:39] -rw-r--r--. 2 boinc boinc     15847 Nov 21 10:55 start_atlas.sh
[2025-11-21 10:58:39] drwxrwx--x. 2 boinc boinc      4096 Nov 21 10:55 shared
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc         0 Nov 21 10:55 boinc_lockfile
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc      2629 Nov 21 10:55 pandaJob.out
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc    989798 Nov 21 10:55 agis_schedconf.cvmfs.json
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc   1526164 Nov 21 10:55 agis_ddmendpoints.agis.ALL.json
[2025-11-21 10:58:39] drwx------. 5 boinc boinc      4096 Nov 21 10:55 pilot3
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc       521 Nov 21 10:56 boinc_task_state.xml
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc       990 Nov 21 10:56 memory_monitor_summary.json
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc     21027 Nov 21 10:56 log.47523642._000014.job.log.tgz.1
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc      8399 Nov 21 10:58 heartbeat.json
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc      8192 Nov 21 10:58 boinc_mmap_file
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc        22 Nov 21 10:58 wrapper_checkpoint.txt
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc        95 Nov 21 10:58 pilot_heartbeat.json
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc      4822 Nov 21 10:58 pilotlog.txt
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc     84465 Nov 21 10:58 log.47523642._000014.job.log.1
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc       188 Nov 21 10:58 output.list
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc       620 Nov 21 10:58 runtime_log
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc    122880 Nov 21 10:58 result.tar.gz
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc       644 Nov 21 10:58 VZuKDmpQeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQLJKDmV5EpHo.diag
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc      8636 Nov 21 10:58 runtime_log.err
[2025-11-21 10:58:39] -rw-r--r--. 1 boinc boinc     21743 Nov 21 10:58 stderr.txt
[2025-11-21 10:58:39] No HITS result produced
[2025-11-21 10:58:39]  *** Contents of shared directory: ***
[2025-11-21 10:58:39] total 290760
[2025-11-21 10:58:39] -rw-r--r--. 2 boinc boinc    589953 Nov 21 10:55 input.tar.gz
[2025-11-21 10:58:39] -rw-r--r--. 2 boinc boinc 297000870 Nov 21 10:55 ATLAS.root_0
[2025-11-21 10:58:39] -rw-r--r--. 2 boinc boinc     15847 Nov 21 10:55 start_atlas.sh
[2025-11-21 10:58:39] -rw-------. 1 boinc boinc    122880 Nov 21 10:58 result.tar.gz
10:58:41 (207833): run_atlas exited; CPU time 15.949315
10:58:41 (207833): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN