Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 16:53:13 (25056): vboxwrapper version 26210
2025-11-27 16:53:13 (25056): BOINC client version: 8.0.2
2025-11-27 16:53:13 (25056): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-11-27 16:53:14 (25056): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 16:53:14 (25056): Create VM. (boinc_b66d32768a266b3d, slot#11)
2025-11-27 16:53:15 (25056): Setting Memory Size for VM. (4800MB)
2025-11-27 16:53:15 (25056): Setting CPU Count for VM. (8)
2025-11-27 16:53:15 (25056): Setting Chipset Options for VM.
2025-11-27 16:53:15 (25056): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 16:53:16 (25056): Setting Boot Options for VM.
2025-11-27 16:53:16 (25056): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 16:53:16 (25056): Enabling VM Network Access.
2025-11-27 16:53:17 (25056): Disabling USB Support for VM.
2025-11-27 16:53:17 (25056): Disabling COM Port Support for VM.
2025-11-27 16:53:17 (25056): Disabling LPT Port Support for VM.
2025-11-27 16:53:17 (25056): Disabling Audio Support for VM.
2025-11-27 16:53:18 (25056): Disabling Clipboard Support for VM.
2025-11-27 16:53:18 (25056): Disabling Drag and Drop Support for VM.
2025-11-27 16:53:18 (25056): Adding storage controller(s) to VM.
2025-11-27 16:53:18 (25056): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 16:53:19 (25056): Adding VirtualBox Guest Additions to VM.
2025-11-27 16:53:19 (25056): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 16:53:20 (25056): forwarding host port 64894 to guest port 80
2025-11-27 16:53:20 (25056): Enabling remote desktop for VM.
2025-11-27 16:53:20 (25056): Enabling shared directory for VM.
2025-11-27 16:53:21 (25056): Starting VM using VBoxManage interface. (boinc_b66d32768a266b3d, slot#11)
2025-11-27 16:53:26 (25056): Successfully started VM. (PID = '25544')
2025-11-27 16:53:26 (25056): Reporting VM Process ID to BOINC.
2025-11-27 16:53:26 (25056): Guest Log: BIOS: VirtualBox 5.2.44
2025-11-27 16:53:26 (25056): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 16:53:26 (25056): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 16:53:26 (25056): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 16:53:26 (25056): Detected: Web Application Enabled (http://localhost:64894)
2025-11-27 16:53:26 (25056): Detected: Remote Desktop Enabled (localhost:64895)
2025-11-27 16:53:26 (25056): Preference change detected
2025-11-27 16:53:26 (25056): Setting CPU throttle for VM. (100%)
2025-11-27 16:53:26 (25056): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 16:53:28 (25056): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 16:53:28 (25056): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 16:53:31 (25056): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 16:53:31 (25056): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 16:53:31 (25056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 16:53:43 (25056): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 16:53:43 (25056): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-27 16:53:54 (25056): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 16:53:54 (25056): Guest Log: 00:00:00.000302 main     Log opened 2025-11-27T16:53:52.582250000Z
2025-11-27 16:53:54 (25056): Guest Log: 00:00:00.000455 main     OS Product: Linux
2025-11-27 16:53:54 (25056): Guest Log: 00:00:00.000538 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 16:53:54 (25056): Guest Log: 00:00:00.000579 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 16:53:54 (25056): Guest Log: 00:00:00.000613 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 16:53:54 (25056): Guest Log: 00:00:00.000614 main     Process ID: 1369
2025-11-27 16:53:54 (25056): Guest Log: 00:00:00.000615 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 16:53:54 (25056): Guest Log: 00:00:00.001582 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 16:53:54 (25056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 16:53:54 (25056): Guest Log: [INFO] Mounting shared directory
2025-11-27 16:53:54 (25056): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 16:54:02 (25056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 16:54:02 (25056): Guest Log: [INFO] Detected branch: prod
2025-11-27 16:54:02 (25056): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 16:54:02 (25056): Guest Log: Copying input files
2025-11-27 16:54:04 (25056): Guest Log: 00:00:10.004043 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 952 452 000ns (GuestNow=1 764 251 643 632 747 000 ns GuestLast=1 764 262 432 585 199 000 ns fSetTimeLastLoop=true )
2025-11-27 16:54:06 (25056): Guest Log: Copied input files into RunAtlas.
2025-11-27 16:54:06 (25056): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-27 16:54:06 (25056): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-27 16:54:06 (25056): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-27 16:54:06 (25056): Guest Log: Further information can be found at the LHC@home message board.
2025-11-27 16:54:16 (25056): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 16:54:16 (25056): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 16:54:16 (25056): Guest Log: 2.6.3.0 1649 0 32200 153366 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-27 16:54:17 (25056): Guest Log: copied the webapp to /var/www
2025-11-27 16:54:17 (25056): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-27 16:54:17 (25056): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-27 16:54:17 (25056): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 16:54:17 (25056): Guest Log:  *** Starting ATLAS job. (PandaID=6894262111 taskID=47533967) ***
2025-11-27 18:33:32 (25056): Status Report: Elapsed Time: '6000.000000'
2025-11-27 18:33:32 (25056): Status Report: CPU Time: '44071.453125'
2025-11-27 20:13:38 (25056): Status Report: Elapsed Time: '12000.000000'
2025-11-27 20:13:38 (25056): Status Report: CPU Time: '91999.031250'
2025-11-27 21:53:44 (25056): Status Report: Elapsed Time: '18000.000000'
2025-11-27 21:53:44 (25056): Status Report: CPU Time: '139908.062500'
2025-11-27 23:33:51 (25056): Status Report: Elapsed Time: '24000.000000'
2025-11-27 23:33:51 (25056): Status Report: CPU Time: '187739.390625'
2025-11-28 00:59:29 (25056): Guest Log:  *** Job finished ***
2025-11-28 00:59:29 (25056): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:14,579 | INFO     | all workflow threads have been joined
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:14,579 | INFO     | end of generic workflow (traces error code: 0)
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:14,579 | INFO     | traces error code: 0
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:14,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,674 | INFO     | PID=6096 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,674 | INFO     | found 0 job(s) in 20 queues
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,675 | INFO     | [monitor] control thread has ended
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,781 [wrapper] ==== pilot stdout END ====
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,788 [wrapper] ==== wrapper stdout RESUME ====
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,794 [wrapper] pilotpid: 6096
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,801 [wrapper] Pilot exit status: 0
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,824 [wrapper] pandaids: 6894262111
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,866 [wrapper] cleanup supervisor_pilot  5497 6097
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,876 [wrapper] Test setup, not cleaning
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,883 [wrapper] apfmon messages muted
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,890 [wrapper] ==== wrapper stdout END ====
2025-11-28 00:59:29 (25056): Guest Log: 2025-11-27 21:59:26,897 [wrapper] ==== wrapper stderr END ====
2025-11-28 00:59:29 (25056): Guest Log:  *** Error codes and diagnostics ***
2025-11-28 00:59:29 (25056): Guest Log:     "exeErrorCode": 0,
2025-11-28 00:59:29 (25056): Guest Log:     "exeErrorDiag": "",
2025-11-28 00:59:29 (25056): Guest Log:     "pilotErrorCode": 0,
2025-11-28 00:59:29 (25056): Guest Log:     "pilotErrorDiag": "",
2025-11-28 00:59:29 (25056): Guest Log:  *** Listing of results directory ***
2025-11-28 00:59:29 (25056): Guest Log: total 915144
2025-11-28 00:59:29 (25056): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 04:12 pilot3.tar.gz
2025-11-28 00:59:29 (25056): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 04:45 runpilot2-wrapper.sh
2025-11-28 00:59:29 (25056): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 04:45 queuedata.json
2025-11-28 00:59:29 (25056): Guest Log: -rwxr-xr-x. 1 atlas atlas      6200 Nov 27 13:54 init_data.xml
2025-11-28 00:59:29 (25056): Guest Log: -rwxr-xr-x. 1 atlas atlas    590104 Nov 27 13:54 input.tar.gz
2025-11-28 00:59:29 (25056): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 27 13:54 start_atlas.sh
2025-11-28 00:59:29 (25056): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 27 13:54 EVNT.47493127._002198.pool.root.1 -> /data/./ATLAS.root_0
2025-11-28 00:59:29 (25056): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 27 13:54 pandaJob.out
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas    991588 Nov 27 13:55 agis_schedconf.cvmfs.json
2025-11-28 00:59:29 (25056): Guest Log: drwx------. 5 atlas atlas      4096 Nov 27 13:55 pilot3
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas 922096840 Nov 27 21:58 HITS.47533967._001698.pool.root.1
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas      1042 Nov 27 21:58 memory_monitor_summary.json
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 21:58 agis_ddmendpoints.agis.ALL.json
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas   1775811 Nov 27 21:58 log.47533967._001698.job.log.tgz.1
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 21:58 pilot_heartbeat.json
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas      8680 Nov 27 21:58 heartbeat.json
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas       744 Nov 27 21:59 pilotlog.txt
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas   3809294 Nov 27 21:59 log.47533967._001698.job.log.1
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 21:59 output.list
2025-11-28 00:59:29 (25056): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 21:59 runtime_log
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas   5601280 Nov 27 21:59 result.tar.gz
2025-11-28 00:59:29 (25056): Guest Log: -rw-r--r--. 1 atlas atlas      8732 Nov 27 21:59 runtime_log.err
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas       655 Nov 27 21:59 48EODmTCYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMJHKDm4FEvam.diag
2025-11-28 00:59:29 (25056): Guest Log: Looking for outputfile HITS.47533967._001698.pool.root.1
2025-11-28 00:59:29 (25056): Guest Log: HITS file was successfully produced
2025-11-28 00:59:29 (25056): Guest Log: -rw-------. 1 atlas atlas 922096840 Nov 27 21:58 /home/atlas/RunAtlas/HITS.47533967._001698.pool.root.1
2025-11-28 00:59:33 (25056): Guest Log: Successfully finished the ATLAS job!
2025-11-28 00:59:33 (25056): Guest Log: Copying the results back to the shared directory!
2025-11-28 00:59:33 (25056): Guest Log:  *** Contents of shared directory: ***
2025-11-28 00:59:33 (25056): Guest Log: total 1308848
2025-11-28 00:59:33 (25056): Guest Log: -rwxrwxrwx. 1 root root 411938578 Nov 27 13:53 ATLAS.root_0
2025-11-28 00:59:33 (25056): Guest Log: -rwxrwxrwx. 1 root root 922096840 Nov 27 21:59 HITS.pool.root.1
2025-11-28 00:59:33 (25056): Guest Log: -rwxrwxrwx. 1 root root      6200 Nov 27 13:53 init_data.xml
2025-11-28 00:59:33 (25056): Guest Log: -rwxrwxrwx. 1 root root    590104 Nov 21 18:36 input.tar.gz
2025-11-28 00:59:33 (25056): Guest Log: -rwxrwxrwx. 1 root root   5601280 Nov 27 21:59 result.tar.gz
2025-11-28 00:59:33 (25056): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 21 18:36 start_atlas.sh
2025-11-28 00:59:33 (25056): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-28 00:59:33 (25056): VM Completion File Detected.
2025-11-28 00:59:33 (25056): Powering off VM.
2025-11-28 00:59:34 (25056): Successfully stopped VM.
2025-11-28 00:59:34 (25056): Deregistering VM. (boinc_b66d32768a266b3d, slot#11)
2025-11-28 00:59:34 (25056): Removing network bandwidth throttle group from VM.
2025-11-28 00:59:34 (25056): Removing VM from VirtualBox.
2025-11-28 00:59:40 (25056): called boinc_finish(0)

</stderr_txt>
]]>

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