Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:04 (1073318): wrapper (7.7.26015): starting
14:47:04 (1073318): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 14:47:04] Arguments: --nthreads 4
[2025-11-24 14:47:04] Threads: 4
[2025-11-24 14:47:04] Checking for CVMFS
[2025-11-24 14:47:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 14:47:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 14:47:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 14:47:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 14:47:04] 2.9.2.0 4320 7389 89464 153247 1 81 30947276 36864001 0 130560 0 2936707 99.977 230894 6299 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 14:47:04] CVMFS is ok
[2025-11-24 14:47:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 14:47:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 14:47:04] Further information can be found at the LHC@home message board.
[2025-11-24 14:47:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 14:47:04] Checking for apptainer binary...
[2025-11-24 14:47:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 14:47:04] Running /usr/bin/apptainer --version
[2025-11-24 14:47:04] apptainer version 1.4.1-1.1
[2025-11-24 14:47:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 14:47:04] madmaxA277
[2025-11-24 14:47:04] apptainer works
[2025-11-24 14:47:04] Set ATHENA_PROC_NUMBER=4
[2025-11-24 14:47:04] Set ATHENA_CORE_NUMBER=4
[2025-11-24 14:47:04] Starting ATLAS job with PandaID=6894259268
[2025-11-24 14:47:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:28:48]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:28:48] 2025-11-24 20:28:03,635 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 21:28:48] 2025-11-24 20:28:03,653 | INFO     | sufficient remaining disk space (325359501312 B)
[2025-11-24 21:28:48] 2025-11-24 20:28:03,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:28:48] 2025-11-24 20:28:03,653 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:28:48] 2025-11-24 20:28:03,653 | INFO     | update_server=False
[2025-11-24 21:28:48] 2025-11-24 20:28:03,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:28:48] 2025-11-24 20:28:03,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:28:48] 2025-11-24 20:28:03,737 | INFO     | all data control threads have been joined
[2025-11-24 21:28:48] 2025-11-24 20:28:04,080 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 21:28:48] 2025-11-24 20:28:04,080 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 21:28:48] 2025-11-24 20:28:04,080 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:28:48] 2025-11-24 20:28:04,080 | INFO     | will abort loop
[2025-11-24 21:28:48] 2025-11-24 20:28:04,368 | INFO     | all job control threads have been joined
[2025-11-24 21:28:48] 2025-11-24 20:28:04,464 | INFO     | all payload control threads have been joined
[2025-11-24 21:28:48] 2025-11-24 20:28:04,659 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:04,659 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:04,742 | INFO     | [data] control thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:04,785 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:04,976 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:04,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:28:48] 2025-11-24 20:28:05,082 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:05,165 | INFO     | [job] validate thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:05,374 | INFO     | [job] control thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:05,433 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:05,469 | INFO     | [payload] control thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:05,527 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:05,529 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:05,631 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:05,950 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:06,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:28:48] 2025-11-24 20:28:06,991 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:10,750 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:28:48] 2025-11-24 20:28:34,537 | INFO     | PID=1077115 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 21:28:48] 2025-11-24 20:28:34,537 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:28:48] 2025-11-24 20:28:34,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:28:48] 2025-11-24 20:28:34,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:28:48] 2025-11-24 20:28:43,633 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:28:48] 2025-11-24 20:28:43,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243354183488)>', '<ExcThread(monitor, started 140242451408640)>']
[2025-11-24 21:28:48] 2025-11-24 20:28:44,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:28:48] 2025-11-24 20:28:44,591 | INFO     | [monitor] control thread has ended
[2025-11-24 21:28:48] 2025-11-24 20:28:48,714 | INFO     | all workflow threads have been joined
[2025-11-24 21:28:48] 2025-11-24 20:28:48,714 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:28:48] 2025-11-24 20:28:48,714 | INFO     | traces error code: 0
[2025-11-24 21:28:48] 2025-11-24 20:28:48,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:28:48] 2025-11-24 20:28:48,791 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:28:48] 2025-11-24 20:28:48,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:28:48] 2025-11-24 20:28:48,799 [wrapper] pilotpid: 1077115
[2025-11-24 21:28:48] 2025-11-24 20:28:48,803 [wrapper] Pilot exit status: 0
[2025-11-24 21:28:48] 2025-11-24 20:28:48,814 [wrapper] pandaids: 6894259268
[2025-11-24 21:28:48] 2025-11-24 20:28:48,835 [wrapper] cleanup supervisor_pilot 1125223 1077116
[2025-11-24 21:28:48] 2025-11-24 20:28:48,838 [wrapper] Test setup, not cleaning
[2025-11-24 21:28:48] 2025-11-24 20:28:48,842 [wrapper] apfmon messages muted
[2025-11-24 21:28:48] 2025-11-24 20:28:48,846 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:28:48] 2025-11-24 20:28:48,849 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:28:48]  *** Error codes and diagnostics ***
[2025-11-24 21:28:48]     "exeErrorCode": 0,
[2025-11-24 21:28:48]     "exeErrorDiag": "",
[2025-11-24 21:28:48]     "pilotErrorCode": 0,
[2025-11-24 21:28:48]     "pilotErrorDiag": "",
[2025-11-24 21:28:48]  *** Listing of results directory ***
[2025-11-24 21:28:48] total 1289640
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc    576529 Nov 21 05:12 pilot3.tar.gz
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc      5112 Nov 21 05:22 queuedata.json
[2025-11-24 21:28:48] -rwx------ 1 boinc boinc     36292 Nov 21 05:23 runpilot2-wrapper.sh
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc       100 Nov 24 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:28:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 14:47 run_atlas
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc       105 Nov 24 14:47 job.xml
[2025-11-24 21:28:48] -rw-r--r-- 2 boinc boinc 409196819 Nov 24 14:47 EVNT.47493127._002185.pool.root.1
[2025-11-24 21:28:48] -rw-r--r-- 2 boinc boinc    590097 Nov 24 14:47 input.tar.gz
[2025-11-24 21:28:48] -rw-r--r-- 2 boinc boinc     15847 Nov 24 14:47 start_atlas.sh
[2025-11-24 21:28:48] drwxrwx--x 2 boinc boinc      4096 Nov 24 14:47 shared
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc         0 Nov 24 14:47 boinc_setup_complete
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc      6373 Nov 24 14:47 init_data.xml
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc         0 Nov 24 14:47 boinc_lockfile
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc      2785 Nov 24 14:47 pandaJob.out
[2025-11-24 21:28:48] -rw------- 1 boinc boinc    988280 Nov 24 14:47 agis_schedconf.cvmfs.json
[2025-11-24 21:28:48] drwx------ 5 boinc boinc      4096 Nov 24 14:47 pilot3
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc       532 Nov 24 21:24 boinc_task_state.xml
[2025-11-24 21:28:48] -rw------- 1 boinc boinc 898217810 Nov 24 21:27 HITS.47533967._001567.pool.root.1
[2025-11-24 21:28:48] -rw------- 1 boinc boinc      1029 Nov 24 21:27 memory_monitor_summary.json
[2025-11-24 21:28:48] -rw------- 1 boinc boinc   1516227 Nov 24 21:27 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:28:48] -rw------- 1 boinc boinc   1244992 Nov 24 21:27 log.47533967._001567.job.log.tgz.1
[2025-11-24 21:28:48] -rw------- 1 boinc boinc      8578 Nov 24 21:28 heartbeat.json
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc      8192 Nov 24 21:28 boinc_mmap_file
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc        28 Nov 24 21:28 wrapper_checkpoint.txt
[2025-11-24 21:28:48] -rw------- 1 boinc boinc        95 Nov 24 21:28 pilot_heartbeat.json
[2025-11-24 21:28:48] -rw------- 1 boinc boinc      4938 Nov 24 21:28 pilotlog.txt
[2025-11-24 21:28:48] -rw------- 1 boinc boinc   3394729 Nov 24 21:28 log.47533967._001567.job.log.1
[2025-11-24 21:28:48] -rw------- 1 boinc boinc       353 Nov 24 21:28 output.list
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc       620 Nov 24 21:28 runtime_log
[2025-11-24 21:28:48] -rw------- 1 boinc boinc   4659200 Nov 24 21:28 result.tar.gz
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc      8918 Nov 24 21:28 runtime_log.err
[2025-11-24 21:28:48] -rw------- 1 boinc boinc       669 Nov 24 21:28 W2oMDmSrXg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmd0IKDmgCyn1m.diag
[2025-11-24 21:28:48] -rw-r--r-- 1 boinc boinc      8094 Nov 24 21:28 stderr.txt
[2025-11-24 21:28:48] HITS file was successfully produced:
[2025-11-24 21:28:48] -rw------- 1 boinc boinc 898217810 Nov 24 21:27 shared/HITS.pool.root.1
[2025-11-24 21:28:48]  *** Contents of shared directory: ***
[2025-11-24 21:28:48] total 1281932
[2025-11-24 21:28:48] -rw-r--r-- 2 boinc boinc 409196819 Nov 24 14:47 ATLAS.root_0
[2025-11-24 21:28:48] -rw-r--r-- 2 boinc boinc    590097 Nov 24 14:47 input.tar.gz
[2025-11-24 21:28:48] -rw-r--r-- 2 boinc boinc     15847 Nov 24 14:47 start_atlas.sh
[2025-11-24 21:28:48] -rw------- 1 boinc boinc 898217810 Nov 24 21:27 HITS.pool.root.1
[2025-11-24 21:28:48] -rw------- 1 boinc boinc   4659200 Nov 24 21:28 result.tar.gz
21:28:50 (1073318): run_atlas exited; CPU time 94260.116659
21:28:50 (1073318): called boinc_finish(0)

</stderr_txt>
]]>

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