Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:07:22 (543048): wrapper (7.7.26015): starting
10:07:22 (543048): wrapper: running run_atlas (--nthreads 12)
[2025-11-21 10:07:22] Arguments: --nthreads 12
[2025-11-21 10:07:22] Threads: 12
[2025-11-21 10:07:22] Checking for CVMFS
[2025-11-21 10:07:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 10:07:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 10:07:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 10:07:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 10:07:23] 2.11.5.0 143847 21195 352316 153138 2 186 42635367 45568000 13494 130560 0 188798755 99.774 129066083 25311 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-21 10:07:23] CVMFS is ok
[2025-11-21 10:07:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 10:07:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 10:07:23] Further information can be found at the LHC@home message board.
[2025-11-21 10:07:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 10:07:23] Checking for apptainer binary...
[2025-11-21 10:07:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 10:07:23] Running /usr/bin/apptainer --version
[2025-11-21 10:07:23] apptainer version 1.4.1-1.el9
[2025-11-21 10:07:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 10:07:23] wns0057.triumf.lcg
[2025-11-21 10:07:23] apptainer works
[2025-11-21 10:07:24] Set ATHENA_PROC_NUMBER=12
[2025-11-21 10:07:24] Set ATHENA_CORE_NUMBER=12
[2025-11-21 10:07:24] Starting ATLAS job with PandaID=6894287707
[2025-11-21 10:07:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 10:12:48]  *** The last 200 lines of the pilot log: ***
[2025-11-21 10:12:48] 2025-11-21 18:11:55,179 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 10:12:48] 2025-11-21 18:11:55,179 | WARNING  | wrong length of table data, x=[1763748519.0, 1763748580.0], y=[1005.0, 632643.0] (must be same and length>=4)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | could have reported an average CPU frequency of 2575 MHz (4 samples)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | ..............................
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . Timing measurements:
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . get job = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . initial setup = 3 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . payload setup = 12 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . stage-in = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . payload execution = 84 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . stage-out = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . log creation = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | ..............................
[2025-11-21 10:12:48] 2025-11-21 18:11:55,181 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 10:12:48] 2025-11-21 18:11:55,181 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894287707/pilotlog.txt
[2025-11-21 10:12:48] 2025-11-21 18:11:55,241 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 10:12:48] - Log from pilotlog.txt -
[2025-11-21 10:12:48] 2025-11-21 18:11:55,178 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894287707/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,178 | INFO     | extracted standard info from prmon json
[2025-11-21 10:12:48] 2025-11-21 18:11:55,178 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 10:12:48] 2025-11-21 18:11:55,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:12:48] 2025-11-21 18:11:55,179 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 10:12:48] 2025-11-21 18:11:55,179 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 10:12:48] 2025-11-21 18:11:55,179 | WARNING  | wrong length of table data, x=[1763748519.0, 1763748580.0], y=[1005.0, 632643.0] (must be same and length>=4)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | could have reported an average CPU frequency of 2575 MHz (4 samples)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | ..............................
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . Timing measurements:
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . get job = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . initial setup = 3 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . payload setup = 12 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . stage-in = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . payload execution = 84 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . stage-out = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . log creation = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | ..............................
[2025-11-21 10:12:48] 2025-11-21 18:11:55,181 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 10:12:48] 2025-11-21 18:11:55,181 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894287707/pilotlog.txt
[2025-11-21 10:12:48] 2025-11-21 18:11:55,241 | WARNING  | 
[2025-11-21 10:12:48] [begin log extracts]
[2025-11-21 10:12:48] - Log from pilotlog.txt -
[2025-11-21 10:12:48] 2025-11-21 18:11:55,178 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894287707/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,178 | INFO     | extracted standard info from prmon json
[2025-11-21 10:12:48] 2025-11-21 18:11:55,178 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 10:12:48] 2025-11-21 18:11:55,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:12:48] 2025-11-21 18:11:55,179 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 10:12:48] 2025-11-21 18:11:55,179 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 10:12:48] 2025-11-21 18:11:55,179 | WARNING  | wrong length of table data, x=[1763748519.0, 1763748580.0], y=[1005.0, 632643.0] (must be same and length>=4)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | could have reported an average CPU frequency of 2575 MHz (4 samples)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | ..............................
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . Timing measurements:
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . get job = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . initial setup = 3 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . payload setup = 12 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . stage-in = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . payload execution = 84 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . stage-out = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | . log creation = 0 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,180 | INFO     | ..............................
[2025-11-21 10:12:48] 2025-11-21 18:11:55,181 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 10:12:48] 2025-11-21 18:11:55,181 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894287707/pilotlog.txt
[2025-11-21 10:12:48] [end log extracts]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,241 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,242 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 10:12:48] 2025-11-21 18:11:55,557 | INFO     | 
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | job summary report
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | --------------------------------------------------
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | PanDA job id: 6894287707
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | task id: 47533967
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 10:09:46,879 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | pilot state: failed 
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | transexitcode: 65
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | exeerrorcode: 65
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | exitcode: 65
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | cpuconsumptiontime: 40 s
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | nevents: 0
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | neventsw: 0
[2025-11-21 10:12:48] 2025-11-21 18:11:55,558 | INFO     | pid: 553323
[2025-11-21 10:12:48] 2025-11-21 18:11:55,559 | INFO     | pgrp: 553323
[2025-11-21 10:12:48] 2025-11-21 18:11:55,559 | INFO     | corecount: 12
[2025-11-21 10:12:48] 2025-11-21 18:11:55,559 | INFO     | event service: False
[2025-11-21 10:12:48] 2025-11-21 18:11:55,559 | INFO     | sizes: {0: 2297979, 1: 2298832, 12: 2298832, 13: 2299122, 22: 2299178, 100: 2324702, 101: 2329020, 221: 2329158}
[2025-11-21 10:12:48] 2025-11-21 18:11:55,559 | INFO     | --------------------------------------------------
[2025-11-21 10:12:48] 2025-11-21 18:11:55,559 | INFO     | 
[2025-11-21 10:12:48] 2025-11-21 18:11:55,559 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 10:12:48] 2025-11-21 18:11:55,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,609 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,609 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 10:12:48] 2025-11-21 18:11:55,609 | INFO     | job 6894287707 has completed (purged errors)
[2025-11-21 10:12:48] 2025-11-21 18:11:55,609 | INFO     | overall cleanup function is called
[2025-11-21 10:12:48] 2025-11-21 18:11:56,615 | INFO     | --- collectZombieJob: --- 10, [553323]
[2025-11-21 10:12:48] 2025-11-21 18:11:56,616 | INFO     | zombie collector waiting for pid 553323
[2025-11-21 10:12:48] 2025-11-21 18:11:56,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 10:12:48] 2025-11-21 18:11:56,616 | INFO     | collected zombie processes
[2025-11-21 10:12:48] 2025-11-21 18:11:56,616 | INFO     | will attempt to kill all subprocesses of pid=553323
[2025-11-21 10:12:48] 2025-11-21 18:11:56,752 | INFO     | process IDs to be killed: [553323] (in reverse order)
[2025-11-21 10:12:48] 2025-11-21 18:11:56,815 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 10:12:48] 2025-11-21 18:11:56,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 10:12:48] 2025-11-21 18:11:56,821 | INFO     | did not find any defunct processes belonging to 553323
[2025-11-21 10:12:48] 2025-11-21 18:11:56,826 | INFO     | did not find any defunct processes belonging to 553323
[2025-11-21 10:12:48] 2025-11-21 18:11:56,827 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 10:12:48] 2025-11-21 18:11:56,827 | INFO     | ready for new job
[2025-11-21 10:12:48] 2025-11-21 18:11:56,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 10:12:48] 2025-11-21 18:11:56,828 | INFO     | ***************************************
[2025-11-21 10:12:48] 2025-11-21 18:11:56,829 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 10:12:48] 2025-11-21 18:11:56,829 | INFO     | ***************************************
[2025-11-21 10:12:48] 2025-11-21 18:11:56,829 | INFO     | 
[2025-11-21 10:12:48] 2025-11-21 18:11:56,831 | INFO     | architecture information:
[2025-11-21 10:12:48] 2025-11-21 18:11:56,831 | INFO     | executing command: cat /etc/os-release
[2025-11-21 10:12:48] 2025-11-21 18:11:56,843 | INFO     | cat /etc/os-release:
[2025-11-21 10:12:48] NAME="CentOS Linux"
[2025-11-21 10:12:48] VERSION="7 (Core)"
[2025-11-21 10:12:48] ID="centos"
[2025-11-21 10:12:48] ID_LIKE="rhel fedora"
[2025-11-21 10:12:48] VERSION_ID="7"
[2025-11-21 10:12:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 10:12:48] ANSI_COLOR="0;31"
[2025-11-21 10:12:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 10:12:48] HOME_URL="https://www.centos.org/"
[2025-11-21 10:12:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 10:12:48] 
[2025-11-21 10:12:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 10:12:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 10:12:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 10:12:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 10:12:48] 
[2025-11-21 10:12:48] 2025-11-21 18:11:56,843 | INFO     | ***************************************
[2025-11-21 10:12:48] 2025-11-21 18:11:57,347 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 10:12:48] 2025-11-21 18:11:57,424 | INFO     | sufficient remaining disk space (2018842247168 B)
[2025-11-21 10:12:48] 2025-11-21 18:11:57,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 10:12:48] 2025-11-21 18:11:57,424 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 10:12:48] 2025-11-21 18:11:57,424 | INFO     | update_server=False
[2025-11-21 10:12:48] 2025-11-21 18:11:57,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 10:12:48] 2025-11-21 18:11:57,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:12:48] 2025-11-21 18:11:57,948 | INFO     | aborting loop
[2025-11-21 10:12:48] 2025-11-21 18:11:58,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 10:12:48] 2025-11-21 18:11:58,177 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 10:12:48] 2025-11-21 18:11:58,238 | INFO     | all data control threads have been joined
[2025-11-21 10:12:48] 2025-11-21 18:11:58,431 | INFO     | [job] retrieve thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:58,579 | INFO     | all job control threads have been joined
[2025-11-21 10:12:48] 2025-11-21 18:11:58,629 | INFO     | [data] copytool_in thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:58,737 | INFO     | all payload control threads have been joined
[2025-11-21 10:12:48] 2025-11-21 18:11:58,763 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:58,954 | INFO     | [job] job monitor thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:58,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:59,116 | INFO     | [payload] failed_post thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:59,244 | INFO     | [data] control thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:59,477 | INFO     | [job] validate thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:59,585 | INFO     | [job] control thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:59,702 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:59,743 | INFO     | [payload] control thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:59,830 | INFO     | [payload] validate_post thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:11:59,872 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:12:00,119 | INFO     | [data] copytool_out thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:12:00,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:12:48] 2025-11-21 18:12:01,341 | INFO     | [job] queue monitor thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:12:02,187 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 10:12:48] 2025-11-21 18:12:27,699 | INFO     | PID=546752 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 10:12:48] 2025-11-21 18:12:27,700 | INFO     | .. there are 13 such processes running
[2025-11-21 10:12:48] 2025-11-21 18:12:27,700 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 10:12:48] 2025-11-21 18:12:27,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 10:12:48] 2025-11-21 18:12:27,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 10:12:48] 2025-11-21 18:12:42,045 | INFO     | [monitor] cgroup control has ended
[2025-11-21 10:12:48] 2025-11-21 18:12:42,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785304598336)>', '<ExcThread(monitor, started 139784525698816)>']
[2025-11-21 10:12:48] 2025-11-21 18:12:42,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 10:12:48] 2025-11-21 18:12:42,790 | INFO     | [monitor] control thread has ended
[2025-11-21 10:12:48] 2025-11-21 18:12:47,505 | INFO     | all workflow threads have been joined
[2025-11-21 10:12:48] 2025-11-21 18:12:47,506 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 10:12:48] 2025-11-21 18:12:47,506 | INFO     | traces error code: 0
[2025-11-21 10:12:48] 2025-11-21 18:12:47,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 10:12:48] 2025-11-21 18:12:47,647 [wrapper] ==== pilot stdout END ====
[2025-11-21 10:12:48] 2025-11-21 18:12:47,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 10:12:48] 2025-11-21 18:12:47,651 [wrapper] pilotpid: 546752
[2025-11-21 10:12:48] 2025-11-21 18:12:47,653 [wrapper] Pilot exit status: 0
[2025-11-21 10:12:48] 2025-11-21 18:12:47,748 [wrapper] pandaids: 6894287707
[2025-11-21 10:12:48] 2025-11-21 18:12:47,798 [wrapper] cleanup supervisor_pilot  546758 546753
[2025-11-21 10:12:48] 2025-11-21 18:12:47,808 [wrapper] Test setup, not cleaning
[2025-11-21 10:12:48] 2025-11-21 18:12:47,872 [wrapper] apfmon messages muted
[2025-11-21 10:12:48] 2025-11-21 18:12:47,892 [wrapper] ==== wrapper stdout END ====
[2025-11-21 10:12:48] 2025-11-21 18:12:47,905 [wrapper] ==== wrapper stderr END ====
[2025-11-21 10:12:48]  *** Error codes and diagnostics ***
[2025-11-21 10:12:48]     "exeErrorCode": 65,
[2025-11-21 10:12:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-21 10:12:48]     "pilotErrorCode": 1305,
[2025-11-21 10:12:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-21 10:12:48]  *** Listing of results directory ***
[2025-11-21 10:12:48] total 404380
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc    576529 Nov 21 02:50 pilot3.tar.gz
[2025-11-21 10:12:48] -rwx------. 1 boinc boinc     36292 Nov 21 03:03 runpilot2-wrapper.sh
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc      5112 Nov 21 03:03 queuedata.json
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc       100 Nov 21 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 10:12:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 10:07 run_atlas
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc       105 Nov 21 10:07 job.xml
[2025-11-21 10:12:48] -rw-r--r--. 2 boinc boinc 409880282 Nov 21 10:07 EVNT.47493127._002384.pool.root.1
[2025-11-21 10:12:48] -rw-r--r--. 2 boinc boinc     15847 Nov 21 10:07 start_atlas.sh
[2025-11-21 10:12:48] drwxrwx--x. 2 boinc boinc      4096 Nov 21 10:07 shared
[2025-11-21 10:12:48] -rw-r--r--. 2 boinc boinc    590101 Nov 21 10:07 input.tar.gz
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc      6594 Nov 21 10:07 init_data.xml
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc         0 Nov 21 10:07 boinc_lockfile
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc      2786 Nov 21 10:07 pandaJob.out
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc    989798 Nov 21 10:07 agis_schedconf.cvmfs.json
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc   1526164 Nov 21 10:07 agis_ddmendpoints.agis.ALL.json
[2025-11-21 10:12:48] drwx------. 5 boinc boinc      4096 Nov 21 10:07 pilot3
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc       524 Nov 21 10:09 boinc_task_state.xml
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc       991 Nov 21 10:09 memory_monitor_summary.json
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc     48714 Nov 21 10:09 log.47533967._003557.job.log.tgz.1
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc        95 Nov 21 10:11 pilot_heartbeat.json
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc     10336 Nov 21 10:11 heartbeat.json
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc      8192 Nov 21 10:12 boinc_mmap_file
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc      4822 Nov 21 10:12 pilotlog.txt
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc        23 Nov 21 10:12 wrapper_checkpoint.txt
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc     98219 Nov 21 10:12 log.47533967._003557.job.log.1
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc       186 Nov 21 10:12 output.list
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc       620 Nov 21 10:12 runtime_log
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc    163840 Nov 21 10:12 result.tar.gz
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc      8636 Nov 21 10:12 runtime_log.err
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc       644 Nov 21 10:12 hydLDmm6dg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKJJKDmJkOWNm.diag
[2025-11-21 10:12:48] -rw-r--r--. 1 boinc boinc     22471 Nov 21 10:12 stderr.txt
[2025-11-21 10:12:48] No HITS result produced
[2025-11-21 10:12:48]  *** Contents of shared directory: ***
[2025-11-21 10:12:48] total 401036
[2025-11-21 10:12:48] -rw-r--r--. 2 boinc boinc 409880282 Nov 21 10:07 ATLAS.root_0
[2025-11-21 10:12:48] -rw-r--r--. 2 boinc boinc     15847 Nov 21 10:07 start_atlas.sh
[2025-11-21 10:12:48] -rw-r--r--. 2 boinc boinc    590101 Nov 21 10:07 input.tar.gz
[2025-11-21 10:12:48] -rw-------. 1 boinc boinc    163840 Nov 21 10:12 result.tar.gz
10:12:49 (543048): run_atlas exited; CPU time 42.575508
10:12:49 (543048): called boinc_finish(0)

</stderr_txt>
]]>

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