Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:42:39 (1642277): wrapper (7.7.26015): starting
04:42:39 (1642277): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 04:42:39] Arguments: --nthreads 4
[2025-11-25 04:42:39] Threads: 4
[2025-11-25 04:42:39] Checking for CVMFS
[2025-11-25 04:42:39] No cvmfs_config command found, will try listing directly
[2025-11-25 04:42:39] CVMFS is ok
[2025-11-25 04:42:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:42:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:42:39] Further information can be found at the LHC@home message board.
[2025-11-25 04:42:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:42:39] Checking for apptainer binary...
[2025-11-25 04:42:39] which: no apptainer in ((null))
[2025-11-25 04:42:39] apptainer is not installed, using version from CVMFS
[2025-11-25 04:42:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:42:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-11-25 04:42:39] apptainer works
[2025-11-25 04:42:39] Set ATHENA_PROC_NUMBER=4
[2025-11-25 04:42:39] Set ATHENA_CORE_NUMBER=4
[2025-11-25 04:42:39] Starting ATLAS job with PandaID=6894258942
[2025-11-25 04:42:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:50:51]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:50:51] 2025-11-25 19:44:47,102 | INFO     | time since job start (57713s) is within the limit (172800.0s)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,131 | INFO     | monitor loop #3890: job 0:6894258942 is in state 'finished'
[2025-11-25 20:50:51] 2025-11-25 19:44:48,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,145 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 20:50:51] 2025-11-25 19:44:48,165 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2700.905234375001
[2025-11-25 20:50:51] 2025-11-25 19:44:48,189 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6894258942/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,190 | INFO     | extracted standard info from prmon json
[2025-11-25 20:50:51] 2025-11-25 19:44:48,190 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:50:51] 2025-11-25 19:44:48,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:50:51] 2025-11-25 19:44:48,206 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:50:51] 2025-11-25 19:44:48,207 | INFO     | sum of square deviations: 262513322032.5
[2025-11-25 20:50:51] 2025-11-25 19:44:48,227 | INFO     | sum of deviations: 700497719736.0001
[2025-11-25 20:50:51] 2025-11-25 19:44:48,227 | INFO     | mean x: 1764071032.5
[2025-11-25 20:50:51] 2025-11-25 19:44:48,227 | INFO     | mean y: 2277601.0465116277
[2025-11-25 20:50:51] 2025-11-25 19:44:48,227 | INFO     | intersect: -4705017732.19983
[2025-11-25 20:50:51] 2025-11-25 19:44:48,228 | INFO     | chi2: 4.038132558576364
[2025-11-25 20:50:51] 2025-11-25 19:44:48,229 | INFO     | sum of square deviations: 258372807190.0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,249 | INFO     | sum of deviations: 896595126664.9998
[2025-11-25 20:50:51] 2025-11-25 19:44:48,249 | INFO     | mean x: 1764070880.0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,249 | INFO     | mean y: 2284816.9160467586
[2025-11-25 20:50:51] 2025-11-25 19:44:48,249 | INFO     | intersect: -6119324385.311383
[2025-11-25 20:50:51] 2025-11-25 19:44:48,250 | INFO     | chi2: 1.9371294755864545
[2025-11-25 20:50:51] 2025-11-25 19:44:48,250 | INFO     | current chi2=1.9371294755864545 (change=52.029076621759394 %)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,251 | INFO     | sum of square deviations: 254276060610.0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,272 | INFO     | sum of deviations: 895287812607.0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,272 | INFO     | mean x: 1764070727.5
[2025-11-25 20:50:51] 2025-11-25 19:44:48,272 | INFO     | mean y: 2284765.9572649575
[2025-11-25 20:50:51] 2025-11-25 19:44:48,272 | INFO     | intersect: -6208882023.077859
[2025-11-25 20:50:51] 2025-11-25 19:44:48,273 | INFO     | chi2: 1.9075620112341332
[2025-11-25 20:50:51] 2025-11-25 19:44:48,273 | INFO     | current chi2=1.9075620112341332 (change=1.5263545738660556 %)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,273 | INFO     | right removable region: 935
[2025-11-25 20:50:51] 2025-11-25 19:44:48,274 | INFO     | sum of square deviations: 258372807190.0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,296 | INFO     | sum of deviations: 532684529835.9998
[2025-11-25 20:50:51] 2025-11-25 19:44:48,296 | INFO     | mean x: 1764071185.0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,296 | INFO     | mean y: 2283770.1190223168
[2025-11-25 20:50:51] 2025-11-25 19:44:48,296 | INFO     | intersect: -3634683447.905343
[2025-11-25 20:50:51] 2025-11-25 19:44:48,297 | INFO     | chi2: 2.246223805246828
[2025-11-25 20:50:51] 2025-11-25 19:44:48,297 | INFO     | current chi2=2.246223805246828 (change=44.374688728922514 %)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,298 | INFO     | sum of square deviations: 254276060610.0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,317 | INFO     | sum of deviations: 522780299453.5001
[2025-11-25 20:50:51] 2025-11-25 19:44:48,317 | INFO     | mean x: 1764071337.5
[2025-11-25 20:50:51] 2025-11-25 19:44:48,318 | INFO     | mean y: 2284138.2895299145
[2025-11-25 20:50:51] 2025-11-25 19:44:48,318 | INFO     | intersect: -3624568267.1756425
[2025-11-25 20:50:51] 2025-11-25 19:44:48,319 | INFO     | chi2: 2.2452109045783604
[2025-11-25 20:50:51] 2025-11-25 19:44:48,319 | INFO     | current chi2=2.2452109045783604 (change=0.045093488284721234 %)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,319 | INFO     | left removable region: 20
[2025-11-25 20:50:51] 2025-11-25 19:44:48,320 | INFO     | sum of square deviations: 237542425930.0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,339 | INFO     | sum of deviations: 710856329754.9996
[2025-11-25 20:50:51] 2025-11-25 19:44:48,339 | INFO     | mean x: 1764071307.0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,339 | INFO     | mean y: 2291454.073224044
[2025-11-25 20:50:51] 2025-11-25 19:44:48,339 | INFO     | intersect: -5276770801.06119
[2025-11-25 20:50:51] 2025-11-25 19:44:48,340 | INFO     | chi2: 0.09175865447206726
[2025-11-25 20:50:51] 2025-11-25 19:44:48,340 | INFO     | current memory leak: 2.99 B/s (using 915 data points, chi2=0.09)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | could have reported an average CPU frequency of 2683 MHz (35 samples)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | ..............................
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | . Timing measurements:
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | . get job = 0 s
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | . initial setup = 1 s
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | . payload setup = 9 s
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | . stage-in = 0 s
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | . payload execution = 57666 s
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | . stage-out = 5 s
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | . log creation = 0 s
[2025-11-25 20:50:51] 2025-11-25 19:44:48,342 | INFO     | ..............................
[2025-11-25 20:50:51] 2025-11-25 19:44:48,441 | INFO     | 
[2025-11-25 20:50:51] 2025-11-25 19:44:48,441 | INFO     | job summary report
[2025-11-25 20:50:51] 2025-11-25 19:44:48,441 | INFO     | --------------------------------------------------
[2025-11-25 20:50:51] 2025-11-25 19:44:48,441 | INFO     | PanDA job id: 6894258942
[2025-11-25 20:50:51] 2025-11-25 19:44:48,441 | INFO     | task id: 47533967
[2025-11-25 20:50:51] 2025-11-25 19:44:48,441 | INFO     | errors: (none)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,441 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:50:51] 2025-11-25 19:44:48,441 | INFO     | pilot state: finished 
[2025-11-25 20:50:51] 2025-11-25 19:44:48,441 | INFO     | transexitcode: 0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | exeerrorcode: 0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | exeerrordiag: 
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | exitcode: 0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | exitmsg: OK
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | cpuconsumptiontime: 228378 s
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | nevents: 1000
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | neventsw: 0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | pid: 1655952
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | pgrp: 1655952
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | corecount: 4
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | event service: False
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | sizes: {0: 2284145, 1: 2284344, 7: 2284606, 11: 2284634, 57680: 2339060, 57681: 2339059, 57687: 2348266, 57689: 2348322, 57696: 2348568}
[2025-11-25 20:50:51] 2025-11-25 19:44:48,442 | INFO     | --------------------------------------------------
[2025-11-25 20:50:51] 2025-11-25 19:44:48,443 | INFO     | 
[2025-11-25 20:50:51] 2025-11-25 19:44:48,443 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-11-25 20:50:51] 2025-11-25 19:44:48,471 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:50:51] 2025-11-25 19:44:48,473 | INFO     | job 6894258942 has completed (purged errors)
[2025-11-25 20:50:51] 2025-11-25 19:44:48,474 | INFO     | overall cleanup function is called
[2025-11-25 20:50:51] 2025-11-25 19:44:49,490 | INFO     | --- collectZombieJob: --- 10, [1655952]
[2025-11-25 20:50:51] 2025-11-25 19:44:49,490 | INFO     | zombie collector waiting for pid 1655952
[2025-11-25 20:50:51] 2025-11-25 19:44:49,490 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:50:51] 2025-11-25 19:44:49,490 | INFO     | collected zombie processes
[2025-11-25 20:50:51] 2025-11-25 19:44:49,490 | INFO     | will attempt to kill all subprocesses of pid=1655952
[2025-11-25 20:50:51] 2025-11-25 19:44:50,212 | INFO     | process IDs to be killed: [1655952] (in reverse order)
[2025-11-25 20:50:51] 2025-11-25 19:44:50,457 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:50:51] 2025-11-25 19:44:50,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:50:51] 2025-11-25 19:44:50,491 | INFO     | did not find any defunct processes belonging to 1655952
[2025-11-25 20:50:51] 2025-11-25 19:44:50,522 | INFO     | did not find any defunct processes belonging to 1655952
[2025-11-25 20:50:51] 2025-11-25 19:44:50,524 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:50:51] 2025-11-25 19:44:50,524 | INFO     | ready for new job
[2025-11-25 20:50:51] 2025-11-25 19:44:50,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:50:51] 2025-11-25 19:44:50,530 | INFO     | ***************************************
[2025-11-25 20:50:51] 2025-11-25 19:44:50,530 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:50:51] 2025-11-25 19:44:50,530 | INFO     | ***************************************
[2025-11-25 20:50:51] 2025-11-25 19:44:50,530 | INFO     | 
[2025-11-25 20:50:51] 2025-11-25 19:44:50,539 | INFO     | architecture information:
[2025-11-25 20:50:51] 2025-11-25 19:44:50,539 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:50:51] 2025-11-25 19:44:50,562 | INFO     | cat /etc/os-release:
[2025-11-25 20:50:51] NAME="CentOS Linux"
[2025-11-25 20:50:51] VERSION="7 (Core)"
[2025-11-25 20:50:51] ID="centos"
[2025-11-25 20:50:51] ID_LIKE="rhel fedora"
[2025-11-25 20:50:51] VERSION_ID="7"
[2025-11-25 20:50:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:50:51] ANSI_COLOR="0;31"
[2025-11-25 20:50:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:50:51] HOME_URL="https://www.centos.org/"
[2025-11-25 20:50:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:50:51] 
[2025-11-25 20:50:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:50:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:50:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:50:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:50:51] 
[2025-11-25 20:50:51] 2025-11-25 19:44:50,562 | INFO     | ***************************************
[2025-11-25 20:50:51] 2025-11-25 19:44:51,065 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-11-25 20:50:51] 2025-11-25 19:44:51,088 | INFO     | sufficient remaining disk space (3249832722432 B)
[2025-11-25 20:50:51] 2025-11-25 19:44:51,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:50:51] 2025-11-25 19:44:51,089 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:50:51] 2025-11-25 19:44:51,089 | INFO     | update_server=False
[2025-11-25 20:50:51] 2025-11-25 19:44:51,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:50:51] 2025-11-25 19:44:51,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:50:51] 2025-11-25 19:44:51,350 | INFO     | all data control threads have been joined
[2025-11-25 20:50:51] 2025-11-25 19:44:51,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:50:51] 2025-11-25 19:44:51,634 | INFO     | aborting loop
[2025-11-25 20:50:51] 2025-11-25 19:44:51,882 | INFO     | all job control threads have been joined
[2025-11-25 20:50:51] 2025-11-25 19:44:51,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:50:51] 2025-11-25 19:44:52,091 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:52,159 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:52,182 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:52,183 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:52,184 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:52,355 | INFO     | [data] control thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:52,538 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:52,557 | INFO     | all payload control threads have been joined
[2025-11-25 20:50:51] 2025-11-25 19:44:52,635 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:52,887 | INFO     | [job] control thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:52,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:53,095 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:53,149 | INFO     | [job] validate thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:53,278 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:53,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:50:51] 2025-11-25 19:44:53,562 | INFO     | [payload] control thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:54,456 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:44:55,945 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:50:51] 2025-11-25 19:45:21,229 | INFO     | PID=1646332 has CPU usage=14.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 20:50:51] 2025-11-25 19:45:21,229 | INFO     | .. there are 5 such processes running
[2025-11-25 20:50:51] 2025-11-25 19:45:21,229 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:50:51] 2025-11-25 19:45:21,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:50:51] 2025-11-25 19:45:21,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:50:51] 2025-11-25 19:45:29,697 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:50:51] 2025-11-25 19:45:30,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22601043814208)>', '<ExcThread(monitor, started 22600803645184)>']
[2025-11-25 20:50:51] 2025-11-25 19:45:31,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:50:51] 2025-11-25 19:45:31,281 | INFO     | [monitor] control thread has ended
[2025-11-25 20:50:51] 2025-11-25 19:45:35,616 | INFO     | all workflow threads have been joined
[2025-11-25 20:50:51] 2025-11-25 19:45:35,616 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:50:51] 2025-11-25 19:45:35,616 | INFO     | traces error code: 0
[2025-11-25 20:50:51] 2025-11-25 19:45:35,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:50:51] 2025-11-25 19:45:35,803 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:50:51] 2025-11-25 19:45:35,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:50:51] 2025-11-25 19:45:35,808 [wrapper] pilotpid: 1646332
[2025-11-25 20:50:51] 2025-11-25 19:45:35,812 [wrapper] Pilot exit status: 0
[2025-11-25 20:50:51] 2025-11-25 19:45:35,826 [wrapper] pandaids: 6894258942
[2025-11-25 20:50:51] 2025-11-25 19:45:36,018 [wrapper] cleanup supervisor_pilot 2860634 1646333
[2025-11-25 20:50:51] 2025-11-25 19:45:36,022 [wrapper] Test setup, not cleaning
[2025-11-25 20:50:51] 2025-11-25 19:45:36,027 [wrapper] apfmon messages muted
[2025-11-25 20:50:51] 2025-11-25 19:45:36,031 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:50:51] 2025-11-25 19:45:36,035 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:50:51]  *** Error codes and diagnostics ***
[2025-11-25 20:50:51]     "exeErrorCode": 0,
[2025-11-25 20:50:51]     "exeErrorDiag": "",
[2025-11-25 20:50:51]     "pilotErrorCode": 0,
[2025-11-25 20:50:51]     "pilotErrorDiag": "",
[2025-11-25 20:50:51]  *** Listing of results directory ***
[2025-11-25 20:50:51] total 1308604
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc    576529 Nov 21 04:09 pilot3.tar.gz
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc      5112 Nov 21 05:08 queuedata.json
[2025-11-25 20:50:51] -rwx------ 1 boinc boinc     36292 Nov 21 05:09 runpilot2-wrapper.sh
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc       100 Nov 25 04:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:50:51] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 04:42 run_atlas
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc       105 Nov 25 04:42 job.xml
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc      6688 Nov 25 04:42 init_data.xml
[2025-11-25 20:50:51] -rw-r--r-- 2 boinc boinc 408541560 Nov 25 04:42 EVNT.47493127._002180.pool.root.1
[2025-11-25 20:50:51] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:42 start_atlas.sh
[2025-11-25 20:50:51] drwxrwx--x 2 boinc boinc      4096 Nov 25 04:42 shared
[2025-11-25 20:50:51] -rw-r--r-- 2 boinc boinc    590105 Nov 25 04:42 input.tar.gz
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:42 boinc_lockfile
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc      2783 Nov 25 04:42 pandaJob.out
[2025-11-25 20:50:51] -rw------- 1 boinc boinc    991801 Nov 25 04:42 agis_schedconf.cvmfs.json
[2025-11-25 20:50:51] drwx------ 5 boinc boinc      4096 Nov 25 04:42 pilot3
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc       532 Nov 25 20:38 boinc_task_state.xml
[2025-11-25 20:50:51] -rw------- 1 boinc boinc 908295623 Nov 25 20:43 HITS.47533967._001511.pool.root.1
[2025-11-25 20:50:51] -rw------- 1 boinc boinc        95 Nov 25 20:44 pilot_heartbeat.json
[2025-11-25 20:50:51] -rw------- 1 boinc boinc      1041 Nov 25 20:44 memory_monitor_summary.json
[2025-11-25 20:50:51] -rw------- 1 boinc boinc   1516240 Nov 25 20:44 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:50:51] -rw------- 1 boinc boinc   1679694 Nov 25 20:44 log.47533967._001511.job.log.tgz.1
[2025-11-25 20:50:51] -rw------- 1 boinc boinc      8604 Nov 25 20:44 heartbeat.json
[2025-11-25 20:50:51] -rw------- 1 boinc boinc      4836 Nov 25 20:45 pilotlog.txt
[2025-11-25 20:50:51] -rw------- 1 boinc boinc   7947581 Nov 25 20:45 log.47533967._001511.job.log.1
[2025-11-25 20:50:51] -rw------- 1 boinc boinc       353 Nov 25 20:45 output.list
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc       620 Nov 25 20:45 runtime_log
[2025-11-25 20:50:51] -rw------- 1 boinc boinc   9646080 Nov 25 20:45 result.tar.gz
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc      9223 Nov 25 20:45 runtime_log.err
[2025-11-25 20:50:51] -rw------- 1 boinc boinc       670 Nov 25 20:45 NtdMDmPdXg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmszIKDmjoMdJo.diag
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc        28 Nov 25 20:50 wrapper_checkpoint.txt
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc      8192 Nov 25 20:50 boinc_mmap_file
[2025-11-25 20:50:51] -rw-r--r-- 1 boinc boinc     21089 Nov 25 20:50 stderr.txt
[2025-11-25 20:50:51] HITS file was successfully produced:
[2025-11-25 20:50:51] -rw------- 1 boinc boinc 908295623 Nov 25 20:43 shared/HITS.pool.root.1
[2025-11-25 20:50:51]  *** Contents of shared directory: ***
[2025-11-25 20:50:51] total 1296000
[2025-11-25 20:50:51] -rw-r--r-- 2 boinc boinc 408541560 Nov 25 04:42 ATLAS.root_0
[2025-11-25 20:50:51] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:42 start_atlas.sh
[2025-11-25 20:50:51] -rw-r--r-- 2 boinc boinc    590105 Nov 25 04:42 input.tar.gz
[2025-11-25 20:50:51] -rw------- 1 boinc boinc 908295623 Nov 25 20:43 HITS.pool.root.1
[2025-11-25 20:50:51] -rw------- 1 boinc boinc   9646080 Nov 25 20:45 result.tar.gz
20:50:52 (1642277): run_atlas exited; CPU time 231493.001451
20:50:52 (1642277): called boinc_finish(0)

</stderr_txt>
]]>

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